Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_E07
(428 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P... 31 0.65
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ... 31 0.87
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro... 31 0.87
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA... 31 0.87
D13806-1|BAA02964.1| 994|Drosophila melanogaster poly(ADP-ribos... 27 8.1
BT015238-1|AAT94467.1| 994|Drosophila melanogaster RE04933p pro... 27 8.1
AY118947-1|AAM50807.1| 557|Drosophila melanogaster LD31274p pro... 27 8.1
AF051548-1|AAC24518.1| 994|Drosophila melanogaster poly(ADP-rib... 27 8.1
>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
protein.
Length = 4129
Score = 31.1 bits (67), Expect = 0.65
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -2
Query: 274 LTAPARNGRSRSDFSLKTILDKPSFILSVSIKSITFFSYLSNVSHPVLTKGI 119
+TA GR+ DF+L +++KP+FI+ +SI + VS VL G+
Sbjct: 2002 ITATNSEGRAAVDFNLAVLVEKPTFIVQPESQSIHDY---RPVSTKVLVHGV 2050
>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
acid-bindingglycoprotein protein.
Length = 3351
Score = 30.7 bits (66), Expect = 0.87
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +3
Query: 42 YPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKY---EKNVIDFMDTLK-IKLG 209
YP L +D K+++ ++ +K+ CD + EK ++D ++LK I G
Sbjct: 3110 YPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVEQIITEKRILDIYNSLKEIVKG 3165
Query: 210 LSNIVLSEKSL---LDLPFRAGAVKHVL 284
++ EK+ LD PFRAGA K ++
Sbjct: 3166 IAPQA-DEKAFQLALDYPFRAGAAKSII 3192
>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p protein.
Length = 1074
Score = 30.7 bits (66), Expect = 0.87
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +3
Query: 42 YPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKY---EKNVIDFMDTLK-IKLG 209
YP L +D K+++ ++ +K+ CD + EK ++D ++LK I G
Sbjct: 833 YPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVEQIITEKRILDIYNSLKEIVKG 888
Query: 210 LSNIVLSEKSL---LDLPFRAGAVKHVL 284
++ EK+ LD PFRAGA K ++
Sbjct: 889 IAPQA-DEKAFQLALDYPFRAGAAKSII 915
>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
protein.
Length = 3351
Score = 30.7 bits (66), Expect = 0.87
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +3
Query: 42 YPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKY---EKNVIDFMDTLK-IKLG 209
YP L +D K+++ ++ +K+ CD + EK ++D ++LK I G
Sbjct: 3110 YPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVEQIITEKRILDIYNSLKEIVKG 3165
Query: 210 LSNIVLSEKSL---LDLPFRAGAVKHVL 284
++ EK+ LD PFRAGA K ++
Sbjct: 3166 IAPQA-DEKAFQLALDYPFRAGAAKSII 3192
>D13806-1|BAA02964.1| 994|Drosophila melanogaster poly(ADP-ribose)
polymerase protein.
Length = 994
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 21 RRTSK-YPYPILYDTDLKLKSSKLH-FDDKERYERMPFVKTGCDTFDKYEKNVIDF-MDT 191
+RT + YP I YD D KL + H F K +K D D K +++F +D
Sbjct: 617 KRTGRMYPIEIQYDDDQKLVKHESHFFTSKLEISVQNLIKLIFD-IDSMNKTLMEFHIDM 675
Query: 192 LKIKLG 209
K+ LG
Sbjct: 676 DKMPLG 681
>BT015238-1|AAT94467.1| 994|Drosophila melanogaster RE04933p
protein.
Length = 994
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 21 RRTSK-YPYPILYDTDLKLKSSKLH-FDDKERYERMPFVKTGCDTFDKYEKNVIDF-MDT 191
+RT + YP I YD D KL + H F K +K D D K +++F +D
Sbjct: 617 KRTGRMYPIEIQYDDDQKLVKHESHFFTSKLEISVQNLIKLIFD-IDSMNKTLMEFHIDM 675
Query: 192 LKIKLG 209
K+ LG
Sbjct: 676 DKMPLG 681
>AY118947-1|AAM50807.1| 557|Drosophila melanogaster LD31274p
protein.
Length = 557
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 21 RRTSK-YPYPILYDTDLKLKSSKLH-FDDKERYERMPFVKTGCDTFDKYEKNVIDF-MDT 191
+RT + YP I YD D KL + H F K +K D D K +++F +D
Sbjct: 180 KRTGRMYPIEIQYDDDQKLVKHESHFFTSKLEISVQNLIKLIFD-IDSMNKTLMEFHIDM 238
Query: 192 LKIKLG 209
K+ LG
Sbjct: 239 DKMPLG 244
>AF051548-1|AAC24518.1| 994|Drosophila melanogaster
poly(ADP-ribose) polymerase protein.
Length = 994
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 21 RRTSK-YPYPILYDTDLKLKSSKLH-FDDKERYERMPFVKTGCDTFDKYEKNVIDF-MDT 191
+RT + YP I YD D KL + H F K +K D D K +++F +D
Sbjct: 617 KRTGRMYPIEIQYDDDQKLVKHESHFFTSKLEISVQNLIKLIFD-IDSMNKTLMEFHIDM 675
Query: 192 LKIKLG 209
K+ LG
Sbjct: 676 DKMPLG 681
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,062,263
Number of Sequences: 53049
Number of extensions: 317475
Number of successful extensions: 671
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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