Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_E05
(373 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991... 32 0.17
05_06_0051 - 25190803-25191216,25191301-25191891,25193248-251933... 32 0.17
12_01_0788 + 7192937-7192994,7193074-7193160,7193242-7193307,719... 31 0.29
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 29 1.2
07_03_0306 + 16496053-16496400 28 2.0
09_04_0374 + 17051995-17052493,17053026-17053240 28 2.7
04_04_1090 - 30764340-30764704,30765092-30765204,30765414-307656... 28 2.7
03_02_1008 - 13170630-13171481 28 2.7
03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248 27 3.6
01_07_0016 - 40476014-40476333,40476598-40476740,40476945-404790... 27 3.6
09_04_0505 + 18183203-18183294,18183388-18183436,18183719-181840... 27 4.7
06_03_1449 - 30239342-30239377,30239804-30239881,30241802-30242152 27 4.7
06_03_1431 - 30105385-30105420,30105847-30105924,30107845-30108195 27 4.7
06_03_1419 + 30048230-30048580,30050596-30050673,30051100-30051135 27 4.7
04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637 27 4.7
03_06_0349 - 33304740-33304761,33305062-33305273 27 4.7
03_06_0090 + 31570588-31570710,31570962-31571080,31572215-315722... 27 4.7
03_02_0801 + 11343227-11343885,11344018-11344087,11344362-113444... 27 4.7
01_06_0657 - 30940020-30940034,30940226-30940861 27 4.7
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51... 27 4.7
11_06_0038 - 19486260-19486341,19487141-19487289 27 6.2
11_01_0807 - 7178278-7178548,7178629-7178756,7178847-7179815,718... 27 6.2
10_07_0051 - 12373146-12373517,12375836-12376105,12377560-12377799 27 6.2
03_02_0309 - 7307241-7307715,7309383-7309591,7309730-7309830,730... 27 6.2
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 27 6.2
10_01_0073 - 955746-955758,955811-956832 26 8.2
10_01_0072 - 918323-918335,918388-919409 26 8.2
09_02_0325 + 7276650-7276770,7276979-7277055,7277146-7277188,727... 26 8.2
08_02_0329 - 15833124-15833825 26 8.2
02_01_0365 + 2621302-2621711,2622442-2622620,2623381-2623496,262... 26 8.2
>09_06_0123 -
20997498-20997512,20998015-20998100,20999066-20999198,
20999264-20999341,21000130-21000216,21001164-21001254,
21001338-21001488,21001567-21002296,21002404-21002820
Length = 595
Score = 31.9 bits (69), Expect = 0.17
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +3
Query: 171 GRSGVARSNRRQNKGKDNDRRSDRVLGVGHN--GTIDSEN*N---NSGRGTQEKSS*ESG 335
G S A + R+ G +N + R G HN G+ D N N N+GR S+ G
Sbjct: 253 GTSSSANDSSRRISGNNNWNNNGRSAGSNHNAAGSGDGSNRNLWNNNGRNGGGSSNGFVG 312
Query: 336 KKGIRCKRGHTR 371
+ G R +R H R
Sbjct: 313 RGGHRNRRDHER 324
>05_06_0051 -
25190803-25191216,25191301-25191891,25193248-25193317,
25193392-25193443,25195368-25195440,25195557-25195646
Length = 429
Score = 31.9 bits (69), Expect = 0.17
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 117 APATLPPLSRRARSTDAPGRSGVARS 194
APA+LPP RRAR+ +P R AR+
Sbjct: 204 APASLPPPPRRARAPPSPARERAART 229
>12_01_0788 +
7192937-7192994,7193074-7193160,7193242-7193307,
7193447-7193555,7194522-7194785,7194919-7195006,
7195085-7195708,7196017-7196140,7196195-7196337,
7196434-7196649,7196781-7196873,7196952-7197032,
7197120-7197504,7197599-7197636
Length = 791
Score = 31.1 bits (67), Expect = 0.29
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 78 VTRVRVLPELTVGAPATLPPLSRRARSTDAPGRSGVARSNRRQNKGKDNDRRSDRVLGVG 257
++R V+PE+ AP R ++ ++ P V+ SN ++ +GK+ + R +G
Sbjct: 423 LSRDDVIPEILQMAPGQKVRPPRNSQPSNCPQTQHVSTSNSKKVRGKNKSKVERRPIGEN 482
Query: 258 H 260
H
Sbjct: 483 H 483
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 161 RRPRSERCRSLKSASKQRERQRPPLR*SPRCRTQRN 268
RR S R +S S R+R PP R SP R +R+
Sbjct: 214 RREHSRRSGRSRSRSPARDRGSPPRRRSPPARRERS 249
>07_03_0306 + 16496053-16496400
Length = 115
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 141 SRRARSTDAPGRSGVARSNRRQNKGKDNDRRSDRVLGVGHNGTIDSE 281
S R+T PGR RS+ + G D RRS G+ +GT++++
Sbjct: 56 SGELRATPQPGRRRGWRSSTDRG-GNDVGRRSGEAAGMAGDGTVEAK 101
>09_04_0374 + 17051995-17052493,17053026-17053240
Length = 237
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 134 RECCRGADGELGEDADPGDVTVGV 63
R C ADG G A PG+V GV
Sbjct: 55 RRCDGNADGATGRPAAPGEVVAGV 78
>04_04_1090 -
30764340-30764704,30765092-30765204,30765414-30765638,
30766432-30766553,30766617-30767174,30769207-30769477,
30772175-30773256
Length = 911
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 128 TPASQSTSQKYRRPRSERCRSLKSASKQRER 220
T + ST K R PRS +CR+ K + Q +R
Sbjct: 788 TDEAISTRAKTRAPRSGKCRAWKEGNYQEKR 818
>03_02_1008 - 13170630-13171481
Length = 283
Score = 27.9 bits (59), Expect = 2.7
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 33 CAVHYCERVAHTHCDVTRVRVLPELTVGAPATLPPLSRRARSTDAPGRSGVARSNRR 203
C V + E+ H C V R + P+ + GA + + +++S+ + GR+ R RR
Sbjct: 213 CIVPWLEQ--HNSCPVCRYELPPQSSTGASCSRTRSTNQSQSSSSNGRTN-GRQRRR 266
>03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248
Length = 496
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 125 NTPASQSTSQKYRRPRSERCRSLKSASKQRERQRPPLR*SPRCRTQRN 268
NT A+ + + RPR S SA ++Q+ P +P QRN
Sbjct: 172 NTAAAATARRGRGRPRGATASSAHSAPPPPQQQQQPTTSAPAITAQRN 219
>01_07_0016 -
40476014-40476333,40476598-40476740,40476945-40479099,
40479205-40480047,40480176-40480269,40480356-40481207,
40481367-40481437,40481750-40481821,40481977-40482019
Length = 1530
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 153 RSTDAPGRSGVARSNRRQNKGKDNDRRSDRV 245
R T PGR + R + + NDRRSD V
Sbjct: 107 RETSLPGRRERKKEVDRDMESRKNDRRSDNV 137
>09_04_0505 +
18183203-18183294,18183388-18183436,18183719-18184003,
18184914-18185135,18185272-18185421
Length = 265
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 145 RLRGGSVAGAPTVSSGRTRTLVTSQWVCA 59
R+RGG +A APT S R L + A
Sbjct: 13 RIRGGGLAAAPTAPSAAARRLSAVSYTAA 41
>06_03_1449 - 30239342-30239377,30239804-30239881,30241802-30242152
Length = 154
Score = 27.1 bits (57), Expect = 4.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 120 PATLPPLSRRARSTDAPGRSGVARSNRRQNKGKDNDRRSDRVL 248
PAT L+ A PG V R+Q+ G +DRR+ R++
Sbjct: 61 PATPVSLAGIAGGASTPGGDEVDMEVRQQSGGSGDDRRTIRMM 103
>06_03_1431 - 30105385-30105420,30105847-30105924,30107845-30108195
Length = 154
Score = 27.1 bits (57), Expect = 4.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 120 PATLPPLSRRARSTDAPGRSGVARSNRRQNKGKDNDRRSDRVL 248
PAT L+ A PG V R+Q+ G +DRR+ R++
Sbjct: 61 PATPVSLAGIAGGASTPGGDEVDMEVRQQSGGSGDDRRTIRMM 103
>06_03_1419 + 30048230-30048580,30050596-30050673,30051100-30051135
Length = 154
Score = 27.1 bits (57), Expect = 4.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 120 PATLPPLSRRARSTDAPGRSGVARSNRRQNKGKDNDRRSDRVL 248
PAT L+ A PG V R+Q+ G +DRR+ R++
Sbjct: 61 PATPVSLAGIAGGASTPGGDEVDMEVRQQSGGSGDDRRTIRMM 103
>04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637
Length = 504
Score = 27.1 bits (57), Expect = 4.7
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +3
Query: 93 VLPELTVGAPATLPPLSRRARSTDAPGRSGVARSNRRQNKGKDNDRRSDRVLGVGHNGTI 272
VLP + VG+ +T+PP SR + A G G +R R +G+ + G G G +
Sbjct: 78 VLPPIRVGSRSTVPP-SRPPPA--AGGGRGRSRGGRGGGRGRGRSLTNGAGSGRGMRGFV 134
Query: 273 DSEN*NNSGRG 305
++SG+G
Sbjct: 135 PPG--SSSGQG 143
>03_06_0349 - 33304740-33304761,33305062-33305273
Length = 77
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -1
Query: 169 GASVLLARRLRGGSVAGAPTVSSGRTRTLV 80
G VL+A + GG GAP +++GR R LV
Sbjct: 6 GVLVLMALVMDGGEKTGAPAIAAGR-RMLV 34
>03_06_0090 +
31570588-31570710,31570962-31571080,31572215-31572284,
31572544-31573492,31574789-31575699
Length = 723
Score = 27.1 bits (57), Expect = 4.7
Identities = 27/82 (32%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Frame = +3
Query: 6 RRARGRGLACAVHYCERVAHTHCDVTRVRVL---PELTVGAPATLPPLSRRARSTDAPGR 176
RR G+ + A H E RVR+L PEL A P S AR PGR
Sbjct: 621 RREVGQCASAASH--EHFVEQVNGCLRVRLLAQPPELVTVEAALFTPRSYGARDGADPGR 678
Query: 177 SGVARSNRRQNKGKDNDRRSDR 242
G A+ RRS R
Sbjct: 679 CGAAKQAAPSPVASTPRRRSCR 700
>03_02_0801 +
11343227-11343885,11344018-11344087,11344362-11344433,
11344511-11344980,11345626-11346598
Length = 747
Score = 27.1 bits (57), Expect = 4.7
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 129 LPPLSRRARSTDAPGRSGV--ARSNRRQNKGKDNDRRSDRVLG 251
+PPL + RS AP R V +R RR + + R D +G
Sbjct: 81 IPPLFQATRSDVAPSRRPVPGSRGGRRGGRSRGRGRGRDGTIG 123
>01_06_0657 - 30940020-30940034,30940226-30940861
Length = 216
Score = 27.1 bits (57), Expect = 4.7
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 129 LPPLSRRARSTDAPGRSGV--ARSNRRQNKGKDNDRRSDRVLG 251
+PPL + RS AP R V +R RR + + R D +G
Sbjct: 78 IPPLFQATRSDIAPSRRPVPGSRGGRRGGRSRGRGRGRDGTIG 120
>01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-514521,
514598-514736,514823-514923,514995-515666,515953-516038,
516112-516777,516874-517128,517231-517358,518645-518799,
518880-519133,519186-519260,519324-519399,519511-519644,
519871-520153,520692-520850,520940-521038,521142-521310,
521423-521653,522002-522114,524179-524310,524389-524469,
525641-525763
Length = 1570
Score = 27.1 bits (57), Expect = 4.7
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 156 STDAP--GRSGVARSNRRQNKGKDNDRRSDRVLGVGHNGTIDSEN*NNSGRGTQEKSS*E 329
ST P GRSG A+ + + G+++ D T DSEN + G ++ S E
Sbjct: 1146 STSRPFQGRSGEAQPSCAEAAGENDADADDEGEESAQRSTEDSEN---ASEGGEDASGSE 1202
Query: 330 SGKKGIRCKR 359
SG G C R
Sbjct: 1203 SG-DGEECSR 1211
>11_06_0038 - 19486260-19486341,19487141-19487289
Length = 76
Score = 26.6 bits (56), Expect = 6.2
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 117 APATLPPLSR-RARSTDAPGRSGVARSNRRQNKGKDNDR-RSDRVLGVG 257
AP T L R RA STD R G + RRQ G ++ R+ R L +G
Sbjct: 7 APQTPTELGRGRATSTDGSKRQGGGAARRRQASGGGSEGVRARRGLVLG 55
>11_01_0807 -
7178278-7178548,7178629-7178756,7178847-7179815,
7180465-7180518,7180622-7180798,7180913-7181926,
7182038-7182101,7182247-7182563,7182797-7182847
Length = 1014
Score = 26.6 bits (56), Expect = 6.2
Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 99 PELTVG--APATLPPLSRRARSTDAPGRSGVARS 194
P+L+ G A A L L RR RSTD P S AR+
Sbjct: 696 PDLSAGDSAAAILDALRRR-RSTDRPAASSAARA 728
>10_07_0051 - 12373146-12373517,12375836-12376105,12377560-12377799
Length = 293
Score = 26.6 bits (56), Expect = 6.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 84 RVRVLPELTVGAPATLPPLSRRARSTDAPGRSGVARS 194
R + +P L+ P+T+ L R P RSG ARS
Sbjct: 239 RAQEMPTLSSSTPSTVGGLGSHCRHRPYPIRSGRARS 275
>03_02_0309 -
7307241-7307715,7309383-7309591,7309730-7309830,
7309918-7310149
Length = 338
Score = 26.6 bits (56), Expect = 6.2
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 96 LPELTVGAPATLPPLSRRARSTD-APGRSGVARSNRRQNKGKDN 224
LPE +VGA A S ARSTD GR G + +RR G D+
Sbjct: 295 LPECSVGAEAEAFLPSGEARSTDRRGGRHG--KRHRRAGGGVDS 336
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 132 PPLSRRARSTDAPGRSGVARSNRRQNKGKDNDRRSDR 242
PP + +S AP RSG S+ K+ SDR
Sbjct: 1205 PPAPKAVQSQPAPKRSGDGGSSSDSGSSKEGGSSSDR 1241
>10_01_0073 - 955746-955758,955811-956832
Length = 344
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 131 PASQSTSQKYRRPRSERCRSLKSASKQRERQRPPLR*SPRCRTQRNH 271
P Q+ R+P+ R + K ++ RE PP +PR R R +
Sbjct: 187 PPPPKKRQQGRQPKVPRAKKPKKSAAPREDGAPPNAPAPRRRGPRKN 233
>10_01_0072 - 918323-918335,918388-919409
Length = 344
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 131 PASQSTSQKYRRPRSERCRSLKSASKQRERQRPPLR*SPRCRTQRNH 271
P Q+ R+P+ R + K ++ RE PP +PR R R +
Sbjct: 187 PPPPKKRQQGRQPKVPRAKKPKKSAAPREDGAPPNAPAPRRRGPRKN 233
>09_02_0325 +
7276650-7276770,7276979-7277055,7277146-7277188,
7277276-7277333,7277922-7277991,7278202-7278670,
7278895-7278959
Length = 300
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 116 ADGELGEDADPGDVTVGVRNS 54
ADG E+ DPGD+ G+ S
Sbjct: 79 ADGNKAENKDPGDLLAGLEGS 99
>08_02_0329 - 15833124-15833825
Length = 233
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 96 LPELTVGAPATLPPLSRRARSTDAP 170
LP L G P PP RR S AP
Sbjct: 195 LPVLAAGPPPPTPPARRRRASPPAP 219
>02_01_0365 +
2621302-2621711,2622442-2622620,2623381-2623496,
2623626-2623964,2624113-2624307,2624505-2624594,
2625288-2625518,2625632-2625952
Length = 626
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 135 PLSRRARSTDAPGRSGVARSNRRQNKGKDNDRRSDRV 245
PL RR S A G+S + R+ + + ND SD V
Sbjct: 69 PLKRRRGSDAATGKSATGPTRRKHKQKRKND-ESDEV 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.304 0.121 0.313
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,855,548
Number of Sequences: 37544
Number of extensions: 164210
Number of successful extensions: 444
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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