Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_E05
(373 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein. 34 0.17
AK096928-1|BAC04900.1| 147|Homo sapiens protein ( Homo sapiens ... 32 0.68
BC071960-1|AAH71960.1| 232|Homo sapiens CCDC71 protein protein. 30 2.7
BC035516-1|AAH35516.1| 467|Homo sapiens coiled-coil domain cont... 30 2.7
M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein. 29 3.6
AK128056-1|BAC87253.1| 197|Homo sapiens protein ( Homo sapiens ... 29 6.3
BC119719-1|AAI19720.1| 637|Homo sapiens chromosome 19 open read... 28 8.4
BC012945-1|AAH12945.2| 546|Homo sapiens C19orf57 protein protein. 28 8.4
BC002891-1|AAH02891.2| 396|Homo sapiens C19orf57 protein protein. 28 8.4
AK097431-1|BAC05049.1| 637|Homo sapiens protein ( Homo sapiens ... 28 8.4
>AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein.
Length = 1266
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 144 RRARSTDAPGRSGVARSNRRQNKGKDNDRRSDRVLGVGHNG 266
RR+R+ D P R R RR +D +RRS LG G G
Sbjct: 27 RRSRTMDGPTRGHGLRKKRRSRSQRDRERRSRGGLGAGAAG 67
>AK096928-1|BAC04900.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ39609 fis, clone SKNSH2008043. ).
Length = 147
Score = 31.9 bits (69), Expect = 0.68
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = -1
Query: 181 PLRPGASVLLARRLRGGSVAGAPTVSSGRTRTLVTSQWVCATRSQ*WTAQARPRPR 14
P R G + R G + T+ +G R Q +CAT++Q A A PRPR
Sbjct: 90 PTRAGHTHSTDRPSHGHTDKDGFTIDTGADRMCTAFQGLCATQTQGLWASAPPRPR 145
>BC071960-1|AAH71960.1| 232|Homo sapiens CCDC71 protein protein.
Length = 232
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -1
Query: 148 RRLRGGSVAGAPTVSSGRTRTLVTSQWVCA--TRSQ*WTAQARPRPRARLV 2
RR++GGS G T + RTL + A R+Q A+AR + +A LV
Sbjct: 33 RRMKGGSALGTKTAQAKVARTLAKAARAQAKVARTQAKAAKARAKAKAALV 83
>BC035516-1|AAH35516.1| 467|Homo sapiens coiled-coil domain
containing 71 protein.
Length = 467
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -1
Query: 148 RRLRGGSVAGAPTVSSGRTRTLVTSQWVCA--TRSQ*WTAQARPRPRARLV 2
RR++GGS G T + RTL + A R+Q A+AR + +A LV
Sbjct: 268 RRMKGGSALGTKTAQAKVARTLAKAARAQAKVARTQAKAAKARAKAKAALV 318
>M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein.
Length = 1084
Score = 29.5 bits (63), Expect = 3.6
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +3
Query: 156 STDAPGRSGVAR---SNRRQNKGKDNDRRS---DRVLGVGHNGTIDSEN*NNSGRGTQEK 317
S D+ +SG S+RRQ RS DR G GH + DS + GRG
Sbjct: 288 SADSSXQSGTRHTQTSSRRQAASSQEQARSRAGDRH-GSGHQQSADSSRHSGIGRGQAST 346
Query: 318 SS*ESGKKGIR 350
+ +SG +G R
Sbjct: 347 AVRDSGHRGSR 357
>AK128056-1|BAC87253.1| 197|Homo sapiens protein ( Homo sapiens
cDNA FLJ46176 fis, clone TESTI4003733. ).
Length = 197
Score = 28.7 bits (61), Expect = 6.3
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 99 PELTVGAPATLPPLS-RRARSTDAPGRSGVARSNRRQNKGKDNDRRSDR 242
P L PA P L ARS+ +P RS RS R N + RRS R
Sbjct: 37 PRLDGSGPALPPDLCLSAARSSASPSRSTCTRSRSRPN--SSSSRRSSR 83
>BC119719-1|AAI19720.1| 637|Homo sapiens chromosome 19 open reading
frame 57 protein.
Length = 637
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 119 GADGELGEDADP-GDVTVGVRNSLAIMDCASEA 24
G GE G+D P GDV VG SLA+ + E+
Sbjct: 396 GESGEAGQDGKPPGDVLVGPTASLALAPGSGES 428
>BC012945-1|AAH12945.2| 546|Homo sapiens C19orf57 protein protein.
Length = 546
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 119 GADGELGEDADP-GDVTVGVRNSLAIMDCASEA 24
G GE G+D P GDV VG SLA+ + E+
Sbjct: 274 GESGEAGQDGKPPGDVLVGPTASLALAPGSGES 306
>BC002891-1|AAH02891.2| 396|Homo sapiens C19orf57 protein protein.
Length = 396
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 119 GADGELGEDADP-GDVTVGVRNSLAIMDCASEA 24
G GE G+D P GDV VG SLA+ + E+
Sbjct: 124 GESGEAGQDGKPPGDVLVGPTASLALAPGSGES 156
>AK097431-1|BAC05049.1| 637|Homo sapiens protein ( Homo sapiens
cDNA FLJ40112 fis, clone TESTI2008394. ).
Length = 637
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 119 GADGELGEDADP-GDVTVGVRNSLAIMDCASEA 24
G GE G+D P GDV VG SLA+ + E+
Sbjct: 396 GESGEAGQDGKPPGDVLVGPTASLALAPGSGES 428
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.304 0.121 0.313
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,130,931
Number of Sequences: 237096
Number of extensions: 785917
Number of successful extensions: 1816
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1813
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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