Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_E05
(373 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 29 1.1
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 29 1.4
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 28 2.4
AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical ... 28 2.4
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 27 3.2
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 27 4.3
AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical ... 27 4.3
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 27 4.3
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 27 4.3
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 27 5.7
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 27 5.7
U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center... 27 5.7
U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center... 27 5.7
U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center... 27 5.7
U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center... 27 5.7
AC024771-5|AAK70662.2| 227|Caenorhabditis elegans Hypothetical ... 27 5.7
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 26 7.5
U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical p... 26 7.5
U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z81477-3|CAB03929.2| 316|Caenorhabditis elegans Hypothetical pr... 26 9.9
AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered cu... 26 9.9
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +3
Query: 99 PELTVGAPATLPPLSRRARS-TDAPGRSGVARSNRRQNKGK 218
PE ++ APA PP SRR+ S T P S A K K
Sbjct: 1269 PEASIPAPAPSPPASRRSVSRTTQPSTSSFATPTEPPAKNK 1309
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 28.7 bits (61), Expect = 1.4
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +3
Query: 69 HCDVTRVRVLPELTVGAPATLPPLSRRARSTDAPGRSGVARSNRR--QNKGKDNDRRSDR 242
HCDV +R L P LPP R S++ S V S+R Q K +D R R
Sbjct: 4087 HCDVPHMRNTRVLVPVVPPPLPPRGFRNDSSNFISTSSVTTSHRPMVQVKPYSSDIRDSR 4146
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 28.7 bits (61), Expect = 1.4
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +3
Query: 69 HCDVTRVRVLPELTVGAPATLPPLSRRARSTDAPGRSGVARSNRR--QNKGKDNDRRSDR 242
HCDV +R L P LPP R S++ S V S+R Q K +D R R
Sbjct: 4087 HCDVPHMRNTRVLVPVVPPPLPPRGFRNDSSNFISTSSVTTSHRPMVQVKPYSSDIRDSR 4146
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 28.7 bits (61), Expect = 1.4
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +3
Query: 69 HCDVTRVRVLPELTVGAPATLPPLSRRARSTDAPGRSGVARSNRR--QNKGKDNDRRSDR 242
HCDV +R L P LPP R S++ S V S+R Q K +D R R
Sbjct: 4087 HCDVPHMRNTRVLVPVVPPPLPPRGFRNDSSNFISTSSVTTSHRPMVQVKPYSSDIRDSR 4146
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -2
Query: 297 RSCFSFLSRWFRC-VRHRGLYLSGGRC---LSLCFDADLSERHRS 175
R+C FL W+RC H G LS L +C + ++H++
Sbjct: 480 RNCVDFLEEWWRCEPSHLGFCLSCSSYSEELEICVFCEFLDKHKA 524
>AC084159-2|AAK39359.1| 659|Caenorhabditis elegans Hypothetical
protein Y73B3A.1 protein.
Length = 659
Score = 27.9 bits (59), Expect = 2.4
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 99 PELTVGAPATLPPLSRRARS-TDAPGRSGVA 188
PE ++ APA PP SRR+ S T P S A
Sbjct: 359 PEASIPAPAPSPPASRRSVSRTTQPSTSSFA 389
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 99 PELTVGAPATLPPLSRRARS-TDAPGRSGVARSNRRQNKGK 218
PE ++ PA PP SRR+ S T P S A K K
Sbjct: 1253 PEASIPVPAPSPPASRRSVSRTTQPSTSSFATPTEPPAKNK 1293
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 27.1 bits (57), Expect = 4.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 138 LSRRARSTDAPGRSGVARSNRRQNKGKDNDRRSDR 242
+SRR+RS + RR+++ +D +R+ DR
Sbjct: 1 MSRRSRSRSRSPKRDREERKRREDRDRDRERKRDR 35
>AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical
protein F32D1.9 protein.
Length = 513
Score = 27.1 bits (57), Expect = 4.3
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = +3
Query: 141 SRRARSTDAPG-----RSGVARSNRRQNKGKDNDRRSDRVLGVGHNGTIDSEN*NNSGR- 302
SRR RS A G R R RR+ +G D DR+ G D E ++SGR
Sbjct: 431 SRRHRSRSASGDRRRKRDDREREKRRERRGDDEDRKKRSRRG-------DEEEESSSGRK 483
Query: 303 GTQEKSS 323
+EKSS
Sbjct: 484 ERKEKSS 490
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 150 ARSTDAPGRSGVARSNRRQNKGKDNDRRSDR 242
ARS + RS +S+ R+++ + DRR DR
Sbjct: 32 ARSNRSRSRSKDRKSSSRRSRSRSRDRRGDR 62
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.1 bits (57), Expect = 4.3
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 124 AGAPTVSSGRTRTLVTSQWVCATRSQ*WTAQARPRP 17
+ +P VSS T +TS A SQ TA++RP P
Sbjct: 1134 SSSPIVSSVSTMEEITSSQPSAPTSQILTAKSRPTP 1169
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 26.6 bits (56), Expect = 5.7
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 189 RSNRRQNKGKDNDRRSDRVLGVGHNGT 269
R RQ K + NDRR D G NGT
Sbjct: 240 RGESRQFKSQRNDRRRDEKSGQYRNGT 266
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 26.6 bits (56), Expect = 5.7
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 90 RVLPELTVGAPATLPPLSRRARSTDAPGRSGVARSNRRQNKGKDNDRRSDRV 245
R P+ +V + +T P R RSTD S + + R + RRS +
Sbjct: 111 RYRPDNSVSSTSTYTPSLSRYRSTDLSSTSDYSSTKYRSPDNSYSSRRSSTI 162
>U53153-6|AAT81184.1| 638|Caenorhabditis elegans Germinal center
kinase family protein1, isoform d protein.
Length = 638
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 133 GSVAGAPTVSSGRTRTLVTSQWVCATRSQ*WTAQARPRPRARLV 2
GS G+PT S RT+++V+ + +Q W + RP + V
Sbjct: 413 GSPNGSPTSSLARTQSMVSPSGQRSGSAQSWELERGNRPMSERV 456
>U53153-5|AAK77641.1| 651|Caenorhabditis elegans Germinal center
kinase family protein1, isoform b protein.
Length = 651
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 133 GSVAGAPTVSSGRTRTLVTSQWVCATRSQ*WTAQARPRPRARLV 2
GS G+PT S RT+++V+ + +Q W + RP + V
Sbjct: 426 GSPNGSPTSSLARTQSMVSPSGQRSGSAQSWELERGNRPMSERV 469
>U53153-4|AAK77642.2| 650|Caenorhabditis elegans Germinal center
kinase family protein1, isoform c protein.
Length = 650
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 133 GSVAGAPTVSSGRTRTLVTSQWVCATRSQ*WTAQARPRPRARLV 2
GS G+PT S RT+++V+ + +Q W + RP + V
Sbjct: 425 GSPNGSPTSSLARTQSMVSPSGQRSGSAQSWELERGNRPMSERV 468
>U53153-3|AAC69038.1| 653|Caenorhabditis elegans Germinal center
kinase family protein1, isoform a protein.
Length = 653
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 133 GSVAGAPTVSSGRTRTLVTSQWVCATRSQ*WTAQARPRPRARLV 2
GS G+PT S RT+++V+ + +Q W + RP + V
Sbjct: 428 GSPNGSPTSSLARTQSMVSPSGQRSGSAQSWELERGNRPMSERV 471
>AC024771-5|AAK70662.2| 227|Caenorhabditis elegans Hypothetical
protein Y40B10A.7 protein.
Length = 227
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 184 TPLRPGASVLLARRLRGGSVA 122
T LRPG + + LRGGSVA
Sbjct: 164 TLLRPGGVIFVDNSLRGGSVA 184
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 26.2 bits (55), Expect = 7.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 18 GRGLACAVHYCERVAHT 68
G+ L+C H CER+ H+
Sbjct: 378 GKQLSCGQHNCERICHS 394
>U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical
protein C45G9.4 protein.
Length = 292
Score = 26.2 bits (55), Expect = 7.5
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 102 ELTVGAPATLPPLSRRAR--STDAPGRSGVARSNRRQNKGKDNDRRSD 239
E V APATLPP S ++ D PG + R R+ K + D
Sbjct: 159 EQMVTAPATLPPPSAESKHLPQDPPGDASSPRVQRQYTAEKYSKEDQD 206
>U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical
protein C45G9.9 protein.
Length = 294
Score = 26.2 bits (55), Expect = 7.5
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 102 ELTVGAPATLPPLSRRAR--STDAPGRSGVARSNRRQNKGKDNDRRSD 239
E V APATLPP S ++ D PG + R R+ K + D
Sbjct: 161 EQMVTAPATLPPPSAESKHLPQDPPGDASSPRVQRQYTAEKYSKEDQD 208
>Z81477-3|CAB03929.2| 316|Caenorhabditis elegans Hypothetical
protein C27C7.3 protein.
Length = 316
Score = 25.8 bits (54), Expect = 9.9
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = +3
Query: 30 ACAVHYCERVAHTHCDVTRVRVLPELTVGAPATLPPLSRRARSTDAPGRSGVARSNRRQN 209
AC C R +V + R A +P L R TD+ G S +RS +
Sbjct: 64 ACRYESCVRAGMRRDNVRKHRTHQNQAATPGAVIPELHLRLTPTDSLGSSSSSRSTSPDD 123
Query: 210 KGKDND 227
+ +D
Sbjct: 124 SEEFSD 129
>AF003386-13|AAB54250.1| 311|Caenorhabditis elegans Blistered
cuticle protein 2 protein.
Length = 311
Score = 25.8 bits (54), Expect = 9.9
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3
Query: 119 GADGELGEDADPG 81
G DGE GED DPG
Sbjct: 206 GDDGEPGEDGDPG 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.304 0.121 0.313
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,710,559
Number of Sequences: 27780
Number of extensions: 115461
Number of successful extensions: 308
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 308
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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