Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_E05
(373 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 26 0.12
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 23 1.2
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 1.5
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 1.5
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 1.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 2.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 2.7
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 3.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 3.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 3.5
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 21 3.5
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 6.2
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 20 8.2
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 20 8.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 8.2
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 26.2 bits (55), Expect = 0.12
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +3
Query: 141 SRRARSTDAPGRSGVARSNRRQNKGKDNDRR--SDRVLGVGHNGTIDSEN*NNSGR--GT 308
++ A + +A ++ ++ RQN + ND + +R NG ++N N R G
Sbjct: 439 NQNANNQNADNQNANKQNGNRQNDNRQNDNKQNGNRQNDNKQNGNRQNDNKQNGNRQNGN 498
Query: 309 QEKSS*ESGKKGIRCKRGHTR 371
++ + ++G + KR R
Sbjct: 499 KQNDNKQNGNRQNDNKRNGNR 519
Score = 21.4 bits (43), Expect = 3.5
Identities = 13/61 (21%), Positives = 27/61 (44%)
Frame = +3
Query: 141 SRRARSTDAPGRSGVARSNRRQNKGKDNDRRSDRVLGVGHNGTIDSEN*NNSGRGTQEKS 320
++ A + +A ++ ++ +QN + ND R + NG ++N N R K
Sbjct: 434 NQNADNQNANNQNADNQNANKQNGNRQNDNRQN---DNKQNGNRQNDNKQNGNRQNDNKQ 490
Query: 321 S 323
+
Sbjct: 491 N 491
Score = 21.4 bits (43), Expect = 3.5
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 195 NRRQ-NKGKDNDRRSDRVLGVGHNGTIDSEN*NN 293
NR+ NK DN + +R NG ++N NN
Sbjct: 493 NRQNGNKQNDNKQNGNRQNDNKRNGNRQNDNQNN 526
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 23.0 bits (47), Expect = 1.2
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = +3
Query: 21 RGLACAVHYCERVAHTHCDVTRVRVL 98
+ + CA+ +C H DV +L
Sbjct: 162 KSITCALQFCHNAGIVHADVKPKNIL 187
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +2
Query: 125 NTPASQSTSQKYRRPRSERCRSLKSASKQRERQ 223
N+ ++ +KYR ER R + + +ER+
Sbjct: 48 NSYKNEKEYRKYRERSKERSRDKRERERSKERK 80
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +2
Query: 125 NTPASQSTSQKYRRPRSERCRSLKSASKQRERQ 223
N+ ++ +KYR ER R + + +ER+
Sbjct: 48 NSYKNEKEYRKYRERSKERSRDKRERERSKERK 80
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.6 bits (46), Expect = 1.5
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +3
Query: 132 PPLSRRARSTDAPGRSGVARSNRRQNK 212
PP R R D+P SG+ + +K
Sbjct: 565 PPQCPRFRKLDSPSDSGIESGTEKPDK 591
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 2.7
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2
Query: 137 SQSTSQKYRRPRSERCRSLKSASKQRERQ 223
++++ +KYR ER R + +ER+
Sbjct: 285 NENSYRKYRETSKERSRDRTERERSKERK 313
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 2.7
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2
Query: 137 SQSTSQKYRRPRSERCRSLKSASKQRERQ 223
++++ +KYR ER R + +ER+
Sbjct: 290 NENSYRKYRETSKERSRDKTERERSKERK 318
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 3.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 219 DNDRRSDRVLGVGHNGTIDSE 281
+N RR+ LG G N DSE
Sbjct: 468 ENSRRAMENLGDGRNNKEDSE 488
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 3.5
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 167 PRSERCRSLKSASKQRERQRPP 232
P RC +L S S Q Q PP
Sbjct: 1115 PEDVRCAALTSQSLQVSWQPPP 1136
Score = 20.2 bits (40), Expect = 8.2
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 137 SQSTSQKYRRPRSERCRSLKSASKQRER 220
S+ + +RP E + ++A QRER
Sbjct: 1637 SRYLGDRMQRPMKESQENQQNAETQRER 1664
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 3.5
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 167 PRSERCRSLKSASKQRERQRPP 232
P RC +L S S Q Q PP
Sbjct: 1111 PEDVRCAALTSQSLQVSWQPPP 1132
Score = 20.2 bits (40), Expect = 8.2
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 137 SQSTSQKYRRPRSERCRSLKSASKQRER 220
S+ + +RP E + ++A QRER
Sbjct: 1633 SRYLGDRMQRPMKESQENQQNAETQRER 1660
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.4 bits (43), Expect = 3.5
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 158 YRRPRSERCRSLKSASKQRERQRPPLR*SPRCRTQR 265
Y R S+ + K + RER+R S R +Q+
Sbjct: 55 YHRQHSKNEQQRKEMEQMREREREQREHSDRVTSQQ 90
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 20.6 bits (41), Expect = 6.2
Identities = 13/47 (27%), Positives = 17/47 (36%)
Frame = +2
Query: 131 PASQSTSQKYRRPRSERCRSLKSASKQRERQRPPLR*SPRCRTQRNH 271
P S S S R P + R K +RP PR R++
Sbjct: 130 PPSVSLSSPPREPGTPRINFTKLKRHHPRYKRPRTTFEPRATDSRHY 176
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.2 bits (40), Expect = 8.2
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 60 AHTHCDVTRVRVLPELTVGAPATLPPLS 143
A VT + + T G A+LPP+S
Sbjct: 272 ARVSLGVTTLLTMATQTSGINASLPPVS 299
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.2 bits (40), Expect = 8.2
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 60 AHTHCDVTRVRVLPELTVGAPATLPPLS 143
A VT + + T G A+LPP+S
Sbjct: 272 ARVSLGVTTLLTMATQTSGINASLPPVS 299
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.2 bits (40), Expect = 8.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 60 AHTHCDVTRVRVLPELTVGAPATL 131
A HC+ T VR + VGA +++
Sbjct: 199 AEDHCNKTAVRKVISGVVGAASSV 222
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.304 0.121 0.313
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,970
Number of Sequences: 438
Number of extensions: 1336
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8928360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.2 bits)
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