Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_E04
(506 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein pr... 136 4e-32
BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6 p... 136 4e-32
BC012805-1|AAH12805.2| 414|Homo sapiens RANBP6 protein protein. 136 4e-32
AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6 p... 136 4e-32
AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein... 136 4e-32
Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5... 135 1e-31
U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein. 135 1e-31
BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5 p... 135 1e-31
BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein. 135 1e-31
BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein. 135 1e-31
BC000947-1|AAH00947.1| 310|Homo sapiens RANBP5 protein protein. 135 1e-31
AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5 p... 135 1e-31
AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5 p... 135 1e-31
AK125858-1|BAC86323.1| 156|Homo sapiens protein ( Homo sapiens ... 36 0.11
AK056857-1|BAB71297.1| 452|Homo sapiens protein ( Homo sapiens ... 33 0.43
BC008863-1|AAH08863.1| 346|Homo sapiens polymerase (RNA) I poly... 31 1.7
BC008118-1|AAH08118.1| 338|Homo sapiens POLR1C protein protein. 31 1.7
AL355802-13|CAI42630.1| 139|Homo sapiens RP3-337H4.4 protein. 31 1.7
AL355802-12|CAI42629.1| 346|Homo sapiens RP3-337H4.4 protein. 31 1.7
AL355802-11|CAI42628.1| 314|Homo sapiens RP3-337H4.4 protein. 31 1.7
AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens ... 31 1.7
AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens ... 31 1.7
AF008442-1|AAC14354.1| 346|Homo sapiens RNA polymerase I subuni... 31 1.7
U86136-1|AAC51107.1| 2627|Homo sapiens telomerase-associated pro... 30 4.0
EU069463-1|ABU25227.1| 1250|Homo sapiens Plk1-interacting checkp... 30 4.0
BC126107-1|AAI26108.1| 2627|Homo sapiens telomerase-associated p... 30 4.0
BC111486-1|AAI11487.1| 1250|Homo sapiens excision repair cross-c... 30 4.0
BC008808-1|AAH08808.1| 419|Homo sapiens FLJ20105 protein protein. 30 4.0
AY121802-1|AAM82750.1| 419|Homo sapiens BJ-HCC-15 tumor antigen... 30 4.0
AK000112-1|BAA90952.1| 419|Homo sapiens protein ( Homo sapiens ... 30 4.0
AB209669-1|BAD92906.1| 1903|Homo sapiens Telomerase protein comp... 30 4.0
AK074719-1|BAC11160.1| 1106|Homo sapiens protein ( Homo sapiens ... 30 5.3
AK125785-1|BAC86290.1| 230|Homo sapiens protein ( Homo sapiens ... 29 7.1
>BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein
protein.
Length = 1109
Score = 136 bits (329), Expect = 4e-32
Identities = 65/167 (38%), Positives = 106/167 (63%), Gaps = 3/167 (1%)
Frame = +3
Query: 9 GVLAQFGGVQFAGACARAVPLLAALISHPESRSVENINATENAISAVAKIIKYNHSQINR 188
GV+AQFGG + C+ AVPLL +I S++ +N+ ATEN ISA+ KI+K+ + +N
Sbjct: 942 GVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFKPNCVNV 1001
Query: 189 DEIIRHWLTWLPVTEDTEEAPHVYSLLCELASSGHAALA---TADAPRHVIATLAEAFLR 359
DE++ HWL+WLP+ ED EEA S LC+L S H + ++ P+ +I+ +AE +
Sbjct: 1002 DEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVIGPNNSNLPK-IISIIAEGKIN 1060
Query: 360 DAVPTDNPAYAQMVALVRQIQGNAELFNTCLMQLSNEHKEALQMALS 500
+ + ++P ++ +VRQ+Q + +L+ C+ QL +E +EALQ L+
Sbjct: 1061 ETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 1107
>BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6
protein.
Length = 1105
Score = 136 bits (329), Expect = 4e-32
Identities = 65/167 (38%), Positives = 106/167 (63%), Gaps = 3/167 (1%)
Frame = +3
Query: 9 GVLAQFGGVQFAGACARAVPLLAALISHPESRSVENINATENAISAVAKIIKYNHSQINR 188
GV+AQFGG + C+ AVPLL +I S++ +N+ ATEN ISA+ KI+K+ + +N
Sbjct: 938 GVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFKPNCVNV 997
Query: 189 DEIIRHWLTWLPVTEDTEEAPHVYSLLCELASSGHAALA---TADAPRHVIATLAEAFLR 359
DE++ HWL+WLP+ ED EEA S LC+L S H + ++ P+ +I+ +AE +
Sbjct: 998 DEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVIGPNNSNLPK-IISIIAEGKIN 1056
Query: 360 DAVPTDNPAYAQMVALVRQIQGNAELFNTCLMQLSNEHKEALQMALS 500
+ + ++P ++ +VRQ+Q + +L+ C+ QL +E +EALQ L+
Sbjct: 1057 ETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 1103
>BC012805-1|AAH12805.2| 414|Homo sapiens RANBP6 protein protein.
Length = 414
Score = 136 bits (329), Expect = 4e-32
Identities = 65/167 (38%), Positives = 106/167 (63%), Gaps = 3/167 (1%)
Frame = +3
Query: 9 GVLAQFGGVQFAGACARAVPLLAALISHPESRSVENINATENAISAVAKIIKYNHSQINR 188
GV+AQFGG + C+ AVPLL +I S++ +N+ ATEN ISA+ KI+K+ + +N
Sbjct: 247 GVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFKPNCVNV 306
Query: 189 DEIIRHWLTWLPVTEDTEEAPHVYSLLCELASSGHAALA---TADAPRHVIATLAEAFLR 359
DE++ HWL+WLP+ ED EEA S LC+L S H + ++ P+ +I+ +AE +
Sbjct: 307 DEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVIGPNNSNLPK-IISIIAEGKIN 365
Query: 360 DAVPTDNPAYAQMVALVRQIQGNAELFNTCLMQLSNEHKEALQMALS 500
+ + ++P ++ +VRQ+Q + +L+ C+ QL +E +EALQ L+
Sbjct: 366 ETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 412
>AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6
protein.
Length = 1105
Score = 136 bits (329), Expect = 4e-32
Identities = 65/167 (38%), Positives = 106/167 (63%), Gaps = 3/167 (1%)
Frame = +3
Query: 9 GVLAQFGGVQFAGACARAVPLLAALISHPESRSVENINATENAISAVAKIIKYNHSQINR 188
GV+AQFGG + C+ AVPLL +I S++ +N+ ATEN ISA+ KI+K+ + +N
Sbjct: 938 GVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFKPNCVNV 997
Query: 189 DEIIRHWLTWLPVTEDTEEAPHVYSLLCELASSGHAALA---TADAPRHVIATLAEAFLR 359
DE++ HWL+WLP+ ED EEA S LC+L S H + ++ P+ +I+ +AE +
Sbjct: 998 DEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVIGPNNSNLPK-IISIIAEGKIN 1056
Query: 360 DAVPTDNPAYAQMVALVRQIQGNAELFNTCLMQLSNEHKEALQMALS 500
+ + ++P ++ +VRQ+Q + +L+ C+ QL +E +EALQ L+
Sbjct: 1057 ETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 1103
>AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein
protein.
Length = 1105
Score = 136 bits (329), Expect = 4e-32
Identities = 65/167 (38%), Positives = 106/167 (63%), Gaps = 3/167 (1%)
Frame = +3
Query: 9 GVLAQFGGVQFAGACARAVPLLAALISHPESRSVENINATENAISAVAKIIKYNHSQINR 188
GV+AQFGG + C+ AVPLL +I S++ +N+ ATEN ISA+ KI+K+ + +N
Sbjct: 938 GVMAQFGGDDYRSLCSEAVPLLVKVIKCANSKTKKNVIATENCISAIGKILKFKPNCVNV 997
Query: 189 DEIIRHWLTWLPVTEDTEEAPHVYSLLCELASSGHAALA---TADAPRHVIATLAEAFLR 359
DE++ HWL+WLP+ ED EEA S LC+L S H + ++ P+ +I+ +AE +
Sbjct: 998 DEVLPHWLSWLPLHEDKEEAIQTLSFLCDLIESNHPVVIGPNNSNLPK-IISIIAEGKIN 1056
Query: 360 DAVPTDNPAYAQMVALVRQIQGNAELFNTCLMQLSNEHKEALQMALS 500
+ + ++P ++ +VRQ+Q + +L+ C+ QL +E +EALQ L+
Sbjct: 1057 ETINYEDPCAKRLANVVRQVQTSEDLWLECVSQLDDEQQEALQELLN 1103
>Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5
protein.
Length = 1097
Score = 135 bits (326), Expect = 1e-31
Identities = 63/168 (37%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Frame = +3
Query: 9 GVLAQFGGVQFAGACARAVPLLAALISHPESRSVENINATENAISAVAKIIKYNHSQINR 188
GV+AQ+GG + C A+PLL +I +S++ EN+NATEN ISAV KI+K+ +N
Sbjct: 930 GVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFKPDCVNV 989
Query: 189 DEIIRHWLTWLPVTEDTEEAPHVYSLLCELASSGHAALA---TADAPRHVIATLAEAFLR 359
+E++ HWL+WLP+ ED EEA ++ LC+L S H + + P+ + + +AE +
Sbjct: 990 EEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPK-IFSIIAEGEMH 1048
Query: 360 DAVPTDNPAYAQMVALVRQIQGNAELFNTCLMQLSNEHKEALQMALST 503
+A+ ++P ++ +VRQ+Q + L+ C+ QLS E + A+Q L++
Sbjct: 1049 EAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1096
>U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein.
Length = 1097
Score = 135 bits (326), Expect = 1e-31
Identities = 63/168 (37%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Frame = +3
Query: 9 GVLAQFGGVQFAGACARAVPLLAALISHPESRSVENINATENAISAVAKIIKYNHSQINR 188
GV+AQ+GG + C A+PLL +I +S++ EN+NATEN ISAV KI+K+ +N
Sbjct: 930 GVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFKPDCVNV 989
Query: 189 DEIIRHWLTWLPVTEDTEEAPHVYSLLCELASSGHAALA---TADAPRHVIATLAEAFLR 359
+E++ HWL+WLP+ ED EEA ++ LC+L S H + + P+ + + +AE +
Sbjct: 990 EEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPK-IFSIIAEGEMH 1048
Query: 360 DAVPTDNPAYAQMVALVRQIQGNAELFNTCLMQLSNEHKEALQMALST 503
+A+ ++P ++ +VRQ+Q + L+ C+ QLS E + A+Q L++
Sbjct: 1049 EAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1096
>BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5
protein.
Length = 1115
Score = 135 bits (326), Expect = 1e-31
Identities = 63/168 (37%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Frame = +3
Query: 9 GVLAQFGGVQFAGACARAVPLLAALISHPESRSVENINATENAISAVAKIIKYNHSQINR 188
GV+AQ+GG + C A+PLL +I +S++ EN+NATEN ISAV KI+K+ +N
Sbjct: 948 GVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFKPDCVNV 1007
Query: 189 DEIIRHWLTWLPVTEDTEEAPHVYSLLCELASSGHAALA---TADAPRHVIATLAEAFLR 359
+E++ HWL+WLP+ ED EEA ++ LC+L S H + + P+ + + +AE +
Sbjct: 1008 EEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPK-IFSIIAEGEMH 1066
Query: 360 DAVPTDNPAYAQMVALVRQIQGNAELFNTCLMQLSNEHKEALQMALST 503
+A+ ++P ++ +VRQ+Q + L+ C+ QLS E + A+Q L++
Sbjct: 1067 EAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1114
>BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein.
Length = 1097
Score = 135 bits (326), Expect = 1e-31
Identities = 63/168 (37%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Frame = +3
Query: 9 GVLAQFGGVQFAGACARAVPLLAALISHPESRSVENINATENAISAVAKIIKYNHSQINR 188
GV+AQ+GG + C A+PLL +I +S++ EN+NATEN ISAV KI+K+ +N
Sbjct: 930 GVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFKPDCVNV 989
Query: 189 DEIIRHWLTWLPVTEDTEEAPHVYSLLCELASSGHAALA---TADAPRHVIATLAEAFLR 359
+E++ HWL+WLP+ ED EEA ++ LC+L S H + + P+ + + +AE +
Sbjct: 990 EEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPK-IFSIIAEGEMH 1048
Query: 360 DAVPTDNPAYAQMVALVRQIQGNAELFNTCLMQLSNEHKEALQMALST 503
+A+ ++P ++ +VRQ+Q + L+ C+ QLS E + A+Q L++
Sbjct: 1049 EAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1096
>BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein.
Length = 1097
Score = 135 bits (326), Expect = 1e-31
Identities = 63/168 (37%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Frame = +3
Query: 9 GVLAQFGGVQFAGACARAVPLLAALISHPESRSVENINATENAISAVAKIIKYNHSQINR 188
GV+AQ+GG + C A+PLL +I +S++ EN+NATEN ISAV KI+K+ +N
Sbjct: 930 GVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFKPDCVNV 989
Query: 189 DEIIRHWLTWLPVTEDTEEAPHVYSLLCELASSGHAALA---TADAPRHVIATLAEAFLR 359
+E++ HWL+WLP+ ED EEA ++ LC+L S H + + P+ + + +AE +
Sbjct: 990 EEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPK-IFSIIAEGEMH 1048
Query: 360 DAVPTDNPAYAQMVALVRQIQGNAELFNTCLMQLSNEHKEALQMALST 503
+A+ ++P ++ +VRQ+Q + L+ C+ QLS E + A+Q L++
Sbjct: 1049 EAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1096
>BC000947-1|AAH00947.1| 310|Homo sapiens RANBP5 protein protein.
Length = 310
Score = 135 bits (326), Expect = 1e-31
Identities = 63/168 (37%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Frame = +3
Query: 9 GVLAQFGGVQFAGACARAVPLLAALISHPESRSVENINATENAISAVAKIIKYNHSQINR 188
GV+AQ+GG + C A+PLL +I +S++ EN+NATEN ISAV KI+K+ +N
Sbjct: 143 GVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFKPDCVNV 202
Query: 189 DEIIRHWLTWLPVTEDTEEAPHVYSLLCELASSGHAALA---TADAPRHVIATLAEAFLR 359
+E++ HWL+WLP+ ED EEA ++ LC+L S H + + P+ + + +AE +
Sbjct: 203 EEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPK-IFSIIAEGEMH 261
Query: 360 DAVPTDNPAYAQMVALVRQIQGNAELFNTCLMQLSNEHKEALQMALST 503
+A+ ++P ++ +VRQ+Q + L+ C+ QLS E + A+Q L++
Sbjct: 262 EAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 309
>AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5
protein.
Length = 1097
Score = 135 bits (326), Expect = 1e-31
Identities = 63/168 (37%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Frame = +3
Query: 9 GVLAQFGGVQFAGACARAVPLLAALISHPESRSVENINATENAISAVAKIIKYNHSQINR 188
GV+AQ+GG + C A+PLL +I +S++ EN+NATEN ISAV KI+K+ +N
Sbjct: 930 GVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFKPDCVNV 989
Query: 189 DEIIRHWLTWLPVTEDTEEAPHVYSLLCELASSGHAALA---TADAPRHVIATLAEAFLR 359
+E++ HWL+WLP+ ED EEA ++ LC+L S H + + P+ + + +AE +
Sbjct: 990 EEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPK-IFSIIAEGEMH 1048
Query: 360 DAVPTDNPAYAQMVALVRQIQGNAELFNTCLMQLSNEHKEALQMALST 503
+A+ ++P ++ +VRQ+Q + L+ C+ QLS E + A+Q L++
Sbjct: 1049 EAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1096
>AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5
protein.
Length = 1097
Score = 135 bits (326), Expect = 1e-31
Identities = 63/168 (37%), Positives = 105/168 (62%), Gaps = 3/168 (1%)
Frame = +3
Query: 9 GVLAQFGGVQFAGACARAVPLLAALISHPESRSVENINATENAISAVAKIIKYNHSQINR 188
GV+AQ+GG + C A+PLL +I +S++ EN+NATEN ISAV KI+K+ +N
Sbjct: 930 GVMAQYGGDNYRPFCTEALPLLVRVIQSADSKTKENVNATENCISAVGKIMKFKPDCVNV 989
Query: 189 DEIIRHWLTWLPVTEDTEEAPHVYSLLCELASSGHAALA---TADAPRHVIATLAEAFLR 359
+E++ HWL+WLP+ ED EEA ++ LC+L S H + + P+ + + +AE +
Sbjct: 990 EEVLPHWLSWLPLHEDKEEAVQTFNYLCDLIESNHPIVLGPNNTNLPK-IFSIIAEGEMH 1048
Query: 360 DAVPTDNPAYAQMVALVRQIQGNAELFNTCLMQLSNEHKEALQMALST 503
+A+ ++P ++ +VRQ+Q + L+ C+ QLS E + A+Q L++
Sbjct: 1049 EAIKHEDPCAKRLANVVRQVQTSGGLWTECIAQLSPEQQAAIQELLNS 1096
>AK125858-1|BAC86323.1| 156|Homo sapiens protein ( Homo sapiens
cDNA FLJ43870 fis, clone TESTI4008219. ).
Length = 156
Score = 35.5 bits (78), Expect = 0.11
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +3
Query: 270 CELASSGHAALATADAPRHVIATLAEAFLRDAVPTDNPAYAQMVALVRQIQGNAELFNTC 449
C +SG ++D+P A+ +A LR P+D+PA A +A ++ +A+L
Sbjct: 46 CHSPASGLHLSGSSDSPASASASWVQANLRLLDPSDSPASASQLAGTTGVRNHAQLIFVF 105
Query: 450 LMQLSNEH 473
L+++ H
Sbjct: 106 LVEMGFHH 113
>AK056857-1|BAB71297.1| 452|Homo sapiens protein ( Homo sapiens
cDNA FLJ32295 fis, clone PROST2001823, weakly similar to
TRANSCRIPTION FACTOR SP1. ).
Length = 452
Score = 33.5 bits (73), Expect = 0.43
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = -2
Query: 448 HVLKSSALPCICRTSATICAYAGLSVGTASRRNASASVAMTWRGASAVASAACPLLASSH 269
H K S+ + + + V ASR S+S A A+A A+AA L++ S
Sbjct: 49 HPWKRSSSSSSASCNVVGSSLSSFGVSGASRNGGSSSAAAA---AAAAAAAAAALVSDS- 104
Query: 268 NSEYTCGASSVSSVTGSH 215
++CG SS S GSH
Sbjct: 105 ---FSCGGSSAHSQDGSH 119
>BC008863-1|AAH08863.1| 346|Homo sapiens polymerase (RNA) I
polypeptide C, 30kDa protein.
Length = 346
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 144 AVAKIIKYNHSQINRDEIIRHWLTWLPVTED 236
AV K++ YN++ I +DEI+ H L +P+ D
Sbjct: 88 AVEKVLVYNNTSIVQDEILAHRLGLIPIHAD 118
>BC008118-1|AAH08118.1| 338|Homo sapiens POLR1C protein protein.
Length = 338
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 144 AVAKIIKYNHSQINRDEIIRHWLTWLPVTED 236
AV K++ YN++ I +DEI+ H L +P+ D
Sbjct: 80 AVEKVLVYNNTSIVQDEILAHRLGLIPIHAD 110
>AL355802-13|CAI42630.1| 139|Homo sapiens RP3-337H4.4 protein.
Length = 139
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 144 AVAKIIKYNHSQINRDEIIRHWLTWLPVTED 236
AV K++ YN++ I +DEI+ H L +P+ D
Sbjct: 87 AVEKVLVYNNTSIVQDEILAHRLGLIPIHAD 117
>AL355802-12|CAI42629.1| 346|Homo sapiens RP3-337H4.4 protein.
Length = 346
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 144 AVAKIIKYNHSQINRDEIIRHWLTWLPVTED 236
AV K++ YN++ I +DEI+ H L +P+ D
Sbjct: 88 AVEKVLVYNNTSIVQDEILAHRLGLIPIHAD 118
>AL355802-11|CAI42628.1| 314|Homo sapiens RP3-337H4.4 protein.
Length = 314
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 144 AVAKIIKYNHSQINRDEIIRHWLTWLPVTED 236
AV K++ YN++ I +DEI+ H L +P+ D
Sbjct: 88 AVEKVLVYNNTSIVQDEILAHRLGLIPIHAD 118
>AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ46261 fis, clone TESTI4025062. ).
Length = 280
Score = 31.5 bits (68), Expect = 1.7
Identities = 28/96 (29%), Positives = 43/96 (44%)
Frame = -2
Query: 487 CKASLCSLLNCIRHVLKSSALPCICRTSATICAYAGLSVGTASRRNASASVAMTWRGASA 308
C +S S +C +S+ PC CR+S T T+ +S + + +W S+
Sbjct: 66 CWSSGTSFTSCSCWSSGTSSTPCSCRSSGT--------SSTSCSCWSSGTSSTSWSCKSS 117
Query: 307 VASAACPLLASSHNSEYTCGASSVSSVTGSHVNQCL 200
S+ C + SS S + SS SS T S + CL
Sbjct: 118 GTSSTCYMCLSSGTS--STSYSSWSSQTSSTSSMCL 151
>AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ43836 fis, clone TESTI4005857. ).
Length = 280
Score = 31.5 bits (68), Expect = 1.7
Identities = 28/96 (29%), Positives = 43/96 (44%)
Frame = -2
Query: 487 CKASLCSLLNCIRHVLKSSALPCICRTSATICAYAGLSVGTASRRNASASVAMTWRGASA 308
C +S S +C +S+ PC CR+S T T+ +S + + +W S+
Sbjct: 66 CWSSGTSFTSCSCWSSGTSSTPCSCRSSGT--------SSTSCSCWSSGTSSTSWSCKSS 117
Query: 307 VASAACPLLASSHNSEYTCGASSVSSVTGSHVNQCL 200
S+ C + SS S + SS SS T S + CL
Sbjct: 118 GTSSTCYMCLSSGTS--STSYSSWSSQTSSTSSMCL 151
>AF008442-1|AAC14354.1| 346|Homo sapiens RNA polymerase I subunit
hRPA39 protein.
Length = 346
Score = 31.5 bits (68), Expect = 1.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 144 AVAKIIKYNHSQINRDEIIRHWLTWLPVTED 236
AV K++ YN++ I +DEI+ H L +P+ D
Sbjct: 88 AVEKVLVYNNTSIVQDEILAHRLGLIPIHAD 118
>U86136-1|AAC51107.1| 2627|Homo sapiens telomerase-associated protein
TP-1 protein.
Length = 2627
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 421 CICRTSATICAYAGLSVGTASRRNASASVAMTWRGASAVASAACP 287
CI R+SA + A A G+ + A + W+ A AVA+A P
Sbjct: 2275 CIPRSSAAVTAVAWAPDGSMAVSGNQAGELILWQEAKAVATAQAP 2319
>EU069463-1|ABU25227.1| 1250|Homo sapiens Plk1-interacting checkpoint
helicase protein.
Length = 1250
Score = 30.3 bits (65), Expect = 4.0
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +3
Query: 168 NHSQINRDEIIRHWLTW--LPVTEDTEEAPHVYSLLCELA---SSGHAALATADAPRHVI 332
N Q+ DEI+RH W + +T +++ A S++ E+A S+ H+AL A A
Sbjct: 880 NLDQLKDDEILRHCNPWPIISITNESQNAESNVSII-EIADDLSASHSALQDAQA----- 933
Query: 333 ATLAEAFLRDAVPTDNPAYA 392
+EA L + +P YA
Sbjct: 934 ---SEAKLEEEPSASSPQYA 950
>BC126107-1|AAI26108.1| 2627|Homo sapiens telomerase-associated
protein 1 protein.
Length = 2627
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 421 CICRTSATICAYAGLSVGTASRRNASASVAMTWRGASAVASAACP 287
CI R+SA + A A G+ + A + W+ A AVA+A P
Sbjct: 2275 CIPRSSAAVTAVAWAPDGSMAVSGNQAGELILWQEAKAVATAQAP 2319
>BC111486-1|AAI11487.1| 1250|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1250
Score = 30.3 bits (65), Expect = 4.0
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +3
Query: 168 NHSQINRDEIIRHWLTW--LPVTEDTEEAPHVYSLLCELA---SSGHAALATADAPRHVI 332
N Q+ DEI+RH W + +T +++ A S++ E+A S+ H+AL A A
Sbjct: 880 NLDQLKDDEILRHCNPWPIISITNESQNAESNVSII-EIADDLSASHSALQDAQA----- 933
Query: 333 ATLAEAFLRDAVPTDNPAYA 392
+EA L + +P YA
Sbjct: 934 ---SEAKLEEEPSASSPQYA 950
>BC008808-1|AAH08808.1| 419|Homo sapiens FLJ20105 protein protein.
Length = 419
Score = 30.3 bits (65), Expect = 4.0
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +3
Query: 168 NHSQINRDEIIRHWLTW--LPVTEDTEEAPHVYSLLCELA---SSGHAALATADAPRHVI 332
N Q+ DEI+RH W + +T +++ A S++ E+A S+ H+AL A A
Sbjct: 49 NLDQLKDDEILRHCNPWPIISITNESQNAESNVSII-EIADDLSASHSALQDAQA----- 102
Query: 333 ATLAEAFLRDAVPTDNPAYA 392
+EA L + +P YA
Sbjct: 103 ---SEAKLEEEPSASSPQYA 119
>AY121802-1|AAM82750.1| 419|Homo sapiens BJ-HCC-15 tumor antigen
protein.
Length = 419
Score = 30.3 bits (65), Expect = 4.0
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +3
Query: 168 NHSQINRDEIIRHWLTW--LPVTEDTEEAPHVYSLLCELA---SSGHAALATADAPRHVI 332
N Q+ DEI+RH W + +T +++ A S++ E+A S+ H+AL A A
Sbjct: 49 NLDQLKDDEILRHCNPWPIISITNESQNAESNVSII-EIADDLSASHSALQDAQA----- 102
Query: 333 ATLAEAFLRDAVPTDNPAYA 392
+EA L + +P YA
Sbjct: 103 ---SEAKLEEEPSASSPQYA 119
>AK000112-1|BAA90952.1| 419|Homo sapiens protein ( Homo sapiens
cDNA FLJ20105 fis, clone COL04811. ).
Length = 419
Score = 30.3 bits (65), Expect = 4.0
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +3
Query: 168 NHSQINRDEIIRHWLTW--LPVTEDTEEAPHVYSLLCELA---SSGHAALATADAPRHVI 332
N Q+ DEI+RH W + +T +++ A S++ E+A S+ H+AL A A
Sbjct: 49 NLDQLKDDEILRHCNPWPIISITNESQNAESNVSII-EIADDLSASHSALQDAQA----- 102
Query: 333 ATLAEAFLRDAVPTDNPAYA 392
+EA L + +P YA
Sbjct: 103 ---SEAKLEEEPSASSPQYA 119
>AB209669-1|BAD92906.1| 1903|Homo sapiens Telomerase protein component
1 variant protein.
Length = 1903
Score = 30.3 bits (65), Expect = 4.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -2
Query: 421 CICRTSATICAYAGLSVGTASRRNASASVAMTWRGASAVASAACP 287
CI R+SA + A A G+ + A + W+ A AVA+A P
Sbjct: 1617 CIPRSSAAVTAVAWAPDGSMAVSGNQAGELILWQEAKAVATAQAP 1661
>AK074719-1|BAC11160.1| 1106|Homo sapiens protein ( Homo sapiens
cDNA FLJ90238 fis, clone NT2RM2000632, weakly similar to
EXCISION REPAIR PROTEIN ERCC-6. ).
Length = 1106
Score = 29.9 bits (64), Expect = 5.3
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = +3
Query: 168 NHSQINRDEIIRHWLTW--LPVTEDTEEAPHVYSLLCELA---SSGHAALATADAPRHVI 332
N Q+ DE++RH W + +T +++ A S++ E+A S+ H+AL A A
Sbjct: 736 NLDQLKDDEVLRHCNPWPIISITNESQNAESNVSII-EIADDLSASHSALQDAQA----- 789
Query: 333 ATLAEAFLRDAVPTDNPAYA 392
+EA L + +P YA
Sbjct: 790 ---SEAKLEEEPSASSPQYA 806
>AK125785-1|BAC86290.1| 230|Homo sapiens protein ( Homo sapiens
cDNA FLJ43797 fis, clone TESTI4000215. ).
Length = 230
Score = 29.5 bits (63), Expect = 7.1
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 208 QCLMISSLL-ICEWLYLMILATAEIAFSVALMFSTDRDS 95
QC+++ LL I + +YLM + +EIA A +F RDS
Sbjct: 4 QCMLVCMLLSIFQIIYLMYIIRSEIADQKACIFLKARDS 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,858,915
Number of Sequences: 237096
Number of extensions: 1127826
Number of successful extensions: 8470
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 8238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8456
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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