Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_E04
         (506 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   4.2  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   4.2  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   4.2  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   9.7  

>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 451 RHVLKSSALPCICRTSATICAYA 383
           R V+  + L C+CR   ++  YA
Sbjct: 103 RKVITKAPLECMCRPCTSVEEYA 125


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 498 RGPFARPLYVRCSTASDM 445
           R PF   LY RCS  + M
Sbjct: 435 RKPFREILYFRCSNLNHM 452


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 361 SRRNASASVAMTWRGASAVASAA 293
           SRR A+  +A+ W  +SA++  A
Sbjct: 159 SRRRAAVLIAIVWICSSAISFPA 181


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 280 ASSHNSEYTCGASSVS 233
           ASS NS+ + G+ SVS
Sbjct: 188 ASSRNSDRSAGSPSVS 203


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,559
Number of Sequences: 438
Number of extensions: 2100
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)