Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_E03
         (296 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010077-1|AAQ22546.1|  924|Drosophila melanogaster LD09801p pro...    28   1.8  
AE013599-1997|AAM68542.1|  924|Drosophila melanogaster CG12424-P...    28   1.8  
AE013599-1996|AAM68541.1|  924|Drosophila melanogaster CG12424-P...    28   1.8  
AE013599-1995|AAF58176.1|  924|Drosophila melanogaster CG12424-P...    28   1.8  
AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night...    27   5.6  
AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-P...    27   5.6  
AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo pro...    27   5.6  
AY058601-1|AAL13830.1| 1148|Drosophila melanogaster LD29239p pro...    26   7.4  
AE014298-2906|AAF48996.2| 2111|Drosophila melanogaster CG14215-P...    26   7.4  
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai...    26   9.7  

>BT010077-1|AAQ22546.1|  924|Drosophila melanogaster LD09801p
           protein.
          Length = 924

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 288 GPGGF*WVFPGASRPGESHTGTELVPPCPLTYC 190
           GPGG      GA  PG    G  +VPP P+ +C
Sbjct: 125 GPGGGGATVVGAPPPGAGKPGVAMVPPPPV-FC 156


>AE013599-1997|AAM68542.1|  924|Drosophila melanogaster CG12424-PC,
           isoform C protein.
          Length = 924

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 288 GPGGF*WVFPGASRPGESHTGTELVPPCPLTYC 190
           GPGG      GA  PG    G  +VPP P+ +C
Sbjct: 125 GPGGGGATVVGAPPPGAGKPGVAMVPPPPV-FC 156


>AE013599-1996|AAM68541.1|  924|Drosophila melanogaster CG12424-PB,
           isoform B protein.
          Length = 924

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 288 GPGGF*WVFPGASRPGESHTGTELVPPCPLTYC 190
           GPGG      GA  PG    G  +VPP P+ +C
Sbjct: 125 GPGGGGATVVGAPPPGAGKPGVAMVPPPPV-FC 156


>AE013599-1995|AAF58176.1|  924|Drosophila melanogaster CG12424-PA,
           isoform A protein.
          Length = 924

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 288 GPGGF*WVFPGASRPGESHTGTELVPPCPLTYC 190
           GPGG      GA  PG    G  +VPP P+ +C
Sbjct: 125 GPGGGGATVVGAPPPGAGKPGVAMVPPPPV-FC 156


>AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night
            protein protein.
          Length = 3579

 Score = 26.6 bits (56), Expect = 5.6
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 282  GGF*WVFPGASRPGESHTGTELVPPCPLTYCIGGL 178
            GG+  V P         TG   + PCP   C GGL
Sbjct: 1502 GGYTCVCPSTHTGQNCETGVGHLRPCPSETCEGGL 1536


>AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-PA
            protein.
          Length = 3574

 Score = 26.6 bits (56), Expect = 5.6
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 282  GGF*WVFPGASRPGESHTGTELVPPCPLTYCIGGL 178
            GG+  V P         TG   + PCP   C GGL
Sbjct: 1502 GGYTCVCPSTHTGQNCETGVGHLRPCPSETCEGGL 1536


>AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo protein.
          Length = 3575

 Score = 26.6 bits (56), Expect = 5.6
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -3

Query: 282  GGF*WVFPGASRPGESHTGTELVPPCPLTYCIGGL 178
            GG+  V P         TG   + PCP   C GGL
Sbjct: 1503 GGYTCVCPSTHTGQNCETGVGHLRPCPSETCEGGL 1537


>AY058601-1|AAL13830.1| 1148|Drosophila melanogaster LD29239p
           protein.
          Length = 1148

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 254 LHVRASPTLARSSSLRAPLPIVLGDSGLTNTI 159
           L  R S T+ +SSS   P+P +L  SG  + +
Sbjct: 184 LQARQSTTIRQSSSSPQPIPPILKGSGAVDAV 215


>AE014298-2906|AAF48996.2| 2111|Drosophila melanogaster CG14215-PA
            protein.
          Length = 2111

 Score = 26.2 bits (55), Expect = 7.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 254  LHVRASPTLARSSSLRAPLPIVLGDSGLTNTI 159
            L  R S T+ +SSS   P+P +L  SG  + +
Sbjct: 1147 LQARQSTTIRQSSSSPQPIPPILKGSGAVDAV 1178


>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
           protein.
          Length = 3712

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +3

Query: 129 GEMHLRTTLTYCISETGVPQYNR*GGTEGRAPCQCGTRPDVKRPEIPTK 275
           G + +   ++YC +E   P +N   G +  A   CG  PD   PE+  K
Sbjct: 9   GALLVILAISYCQAELTPPYFNLATGRKIYATATCG--PDTDGPELYCK 55


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,939,174
Number of Sequences: 53049
Number of extensions: 351140
Number of successful extensions: 887
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 527894775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)