Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_E02
(546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80836-14|AAB37896.1| 185|Caenorhabditis elegans Hypothetical p... 33 0.10
Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z78019-8|CAJ85784.2| 195|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z73972-10|CAA98263.2| 388|Caenorhabditis elegans Hypothetical p... 28 5.0
AL021474-8|CAA16310.2| 388|Caenorhabditis elegans Hypothetical ... 28 5.0
AL110485-12|CAE18012.1| 227|Caenorhabditis elegans Hypothetical... 27 6.7
AF098499-1|AAC67397.1| 245|Caenorhabditis elegans Hypothetical ... 27 6.7
Z78017-2|CAD44160.1| 615|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z73976-10|CAD44151.1| 615|Caenorhabditis elegans Hypothetical p... 27 8.8
>U80836-14|AAB37896.1| 185|Caenorhabditis elegans Hypothetical
protein B0432.12 protein.
Length = 185
Score = 33.5 bits (73), Expect = 0.10
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +3
Query: 201 YSPELNYFLAYQYCRSLGLQLASFETKEKADSITTYLTNAGYNKYDFWTSGNNLG 365
Y ++N+ A ++C G LA ++E+A + AG + +W G G
Sbjct: 38 YHLKMNFPRAKKHCEQNGAHLAGITSREEAQKLIDLANEAGESNEQYWLGGQRKG 92
>Z22179-5|CAA80162.2| 786|Caenorhabditis elegans Hypothetical
protein F58A4.5 protein.
Length = 786
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 201 YSPELNYFLAYQYCRSLGLQLASFETKEKADSITTYLTNAGY---NKYDFWTSGNNLGTD 371
Y+ ++ A +YC SLG QLA K D + Y NA N FW +NL +
Sbjct: 49 YNTPKSFQAARRYCVSLGGQLAD---KINKDDSSLYSANADLEVANSTKFWVGASNLKCN 105
Query: 372 MYLWMSTG 395
+ W + G
Sbjct: 106 I-AWENGG 112
>Z78019-8|CAJ85784.2| 195|Caenorhabditis elegans Hypothetical
protein ZK863.9 protein.
Length = 195
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 228 AYQYCRSLGLQLASFETKEKADSI 299
A Q C LG LASFET ++A S+
Sbjct: 81 AEQECVELGAHLASFETTDEATSV 104
>Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical
protein F13A7.7 protein.
Length = 358
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 201 YSPELNYFLAYQYCRSLGLQ-LASFETKEKADSITTYLTNAGYNKYDFWTSG 353
Y P L+Y + R+ + LASF ++ DS T+ N G ++ + W G
Sbjct: 243 YIPNLSYSNSTSSSRASSVDSLASFNSQSSTDSQNTFRKNGGRDQLE-WKQG 293
>Z73972-10|CAA98263.2| 388|Caenorhabditis elegans Hypothetical
protein F15H10.4 protein.
Length = 388
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/44 (22%), Positives = 22/44 (50%)
Frame = +1
Query: 400 PVQRYL*LHVEGCQWTLQLSTLTTASNLWMCPNAVLAPNAQLDT 531
P+ R + +HV GC + + ++ + W+C + P++ T
Sbjct: 80 PLCRSIYMHVVGCNYVICANSACNTAFCWLCEKPMGRPSSHFTT 123
>AL021474-8|CAA16310.2| 388|Caenorhabditis elegans Hypothetical
protein F15H10.4 protein.
Length = 388
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/44 (22%), Positives = 22/44 (50%)
Frame = +1
Query: 400 PVQRYL*LHVEGCQWTLQLSTLTTASNLWMCPNAVLAPNAQLDT 531
P+ R + +HV GC + + ++ + W+C + P++ T
Sbjct: 80 PLCRSIYMHVVGCNYVICANSACNTAFCWLCEKPMGRPSSHFTT 123
>AL110485-12|CAE18012.1| 227|Caenorhabditis elegans Hypothetical
protein Y46G5A.35 protein.
Length = 227
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 321 GYNKYDFWTSGNNLGTDMYLWMSTGIARSTLPLTTCRRLPMDAPAQHADDSIEPLDVPQ 497
G +YDF + LG +W + R CR LP A Q A++ I+ +P+
Sbjct: 169 GPGRYDF--THEVLGEQESVWNGEQVPRERRISIICRDLPKVANRQTAEEEIKLKPIPE 225
>AF098499-1|AAC67397.1| 245|Caenorhabditis elegans Hypothetical
protein C43H8.2 protein.
Length = 245
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 113 HLDPRSCSSSKDNDYSV 163
HL RSCS DND+ V
Sbjct: 81 HLSERSCSGGSDNDFDV 97
>Z78017-2|CAD44160.1| 615|Caenorhabditis elegans Hypothetical
protein T07C12.12 protein.
Length = 615
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 207 PELNYFLAY-QYCRSLGLQLASFETKEKADSITTYLTN 317
P+LN F+ QY R LG++ + K+K + TT +N
Sbjct: 198 PQLNSFVPVDQYARLLGIKSLNLSAKKKEEVKTTMNSN 235
>Z73976-10|CAD44151.1| 615|Caenorhabditis elegans Hypothetical
protein T07C12.12 protein.
Length = 615
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 207 PELNYFLAY-QYCRSLGLQLASFETKEKADSITTYLTN 317
P+LN F+ QY R LG++ + K+K + TT +N
Sbjct: 198 PQLNSFVPVDQYARLLGIKSLNLSAKKKEEVKTTMNSN 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,430,926
Number of Sequences: 27780
Number of extensions: 247691
Number of successful extensions: 679
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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