Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_D24
         (633 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001619-1|AAN71374.1|  773|Drosophila melanogaster RE35250p pro...   349   1e-96
AJ276482-1|CAB81549.1|  769|Drosophila melanogaster putative Sec...   349   1e-96
AE014297-319|AAF51979.2|  773|Drosophila melanogaster CG1250-PB,...   349   1e-96
AE014297-318|AAF51978.2|  773|Drosophila melanogaster CG1250-PA,...   349   1e-96
X77075-1|CAA54348.1|  417|Drosophila melanogaster protein ( D.me...    30   2.3  
AE014297-522|AAS65104.1|  417|Drosophila melanogaster CG1030-PC,...    30   2.3  
AE014297-521|AAS65103.1|  417|Drosophila melanogaster CG1030-PB,...    30   2.3  
AE014297-520|AAF54082.1|  417|Drosophila melanogaster CG1030-PA,...    30   2.3  
AE001572-5|AAD19795.1|  417|Drosophila melanogaster homeodomain ...    30   2.3  

>BT001619-1|AAN71374.1|  773|Drosophila melanogaster RE35250p protein.
          Length = 773

 Score =  349 bits (859), Expect = 1e-96
 Identities = 165/186 (88%), Positives = 174/186 (93%)
 Frame = +2

Query: 8    ENFSLYPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFGGP 187
            +NFSL+PQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSF GP
Sbjct: 580  QNFSLFPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFNGP 639

Query: 188  PEPVLLDTSSIQPDRILLMDTFFQILIYHGETIAQWRALRYQDMAEYESFAQLLRAPIDD 367
            PEPVLLDT+SIQ DRILLMDTFFQILIYHGETIAQWRAL+YQDM EYE+F QLL+AP+DD
Sbjct: 640  PEPVLLDTASIQADRILLMDTFFQILIYHGETIAQWRALKYQDMPEYENFKQLLQAPVDD 699

Query: 368  AQEILQSRFPVPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYGGAMPIPSADGGAPVLT 547
            AQEILQ+RFP+PRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYG        DGGAPVLT
Sbjct: 700  AQEILQTRFPMPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYG-------QDGGAPVLT 752

Query: 548  DDVSLQ 565
            DDVSLQ
Sbjct: 753  DDVSLQ 758



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +3

Query: 564 KVFMEHLKKLAVSST 608
           ++FMEHLKKLAVS+T
Sbjct: 758 QLFMEHLKKLAVSTT 772


>AJ276482-1|CAB81549.1|  769|Drosophila melanogaster putative Sec23
            protein protein.
          Length = 769

 Score =  349 bits (859), Expect = 1e-96
 Identities = 165/186 (88%), Positives = 174/186 (93%)
 Frame = +2

Query: 8    ENFSLYPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFGGP 187
            +NFSL+PQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSF GP
Sbjct: 576  QNFSLFPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFNGP 635

Query: 188  PEPVLLDTSSIQPDRILLMDTFFQILIYHGETIAQWRALRYQDMAEYESFAQLLRAPIDD 367
            PEPVLLDT+SIQ DRILLMDTFFQILIYHGETIAQWRAL+YQDM EYE+F QLL+AP+DD
Sbjct: 636  PEPVLLDTASIQADRILLMDTFFQILIYHGETIAQWRALKYQDMPEYENFKQLLQAPVDD 695

Query: 368  AQEILQSRFPVPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYGGAMPIPSADGGAPVLT 547
            AQEILQ+RFP+PRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYG        DGGAPVLT
Sbjct: 696  AQEILQTRFPMPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYG-------QDGGAPVLT 748

Query: 548  DDVSLQ 565
            DDVSLQ
Sbjct: 749  DDVSLQ 754



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +3

Query: 564 KVFMEHLKKLAVSST 608
           ++FMEHLKKLAVS+T
Sbjct: 754 QLFMEHLKKLAVSTT 768


>AE014297-319|AAF51979.2|  773|Drosophila melanogaster CG1250-PB,
            isoform B protein.
          Length = 773

 Score =  349 bits (859), Expect = 1e-96
 Identities = 165/186 (88%), Positives = 174/186 (93%)
 Frame = +2

Query: 8    ENFSLYPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFGGP 187
            +NFSL+PQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSF GP
Sbjct: 580  QNFSLFPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFNGP 639

Query: 188  PEPVLLDTSSIQPDRILLMDTFFQILIYHGETIAQWRALRYQDMAEYESFAQLLRAPIDD 367
            PEPVLLDT+SIQ DRILLMDTFFQILIYHGETIAQWRAL+YQDM EYE+F QLL+AP+DD
Sbjct: 640  PEPVLLDTASIQADRILLMDTFFQILIYHGETIAQWRALKYQDMPEYENFKQLLQAPVDD 699

Query: 368  AQEILQSRFPVPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYGGAMPIPSADGGAPVLT 547
            AQEILQ+RFP+PRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYG        DGGAPVLT
Sbjct: 700  AQEILQTRFPMPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYG-------QDGGAPVLT 752

Query: 548  DDVSLQ 565
            DDVSLQ
Sbjct: 753  DDVSLQ 758



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +3

Query: 564 KVFMEHLKKLAVSST 608
           ++FMEHLKKLAVS+T
Sbjct: 758 QLFMEHLKKLAVSTT 772


>AE014297-318|AAF51978.2|  773|Drosophila melanogaster CG1250-PA,
            isoform A protein.
          Length = 773

 Score =  349 bits (859), Expect = 1e-96
 Identities = 165/186 (88%), Positives = 174/186 (93%)
 Frame = +2

Query: 8    ENFSLYPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFGGP 187
            +NFSL+PQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSF GP
Sbjct: 580  QNFSLFPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFNGP 639

Query: 188  PEPVLLDTSSIQPDRILLMDTFFQILIYHGETIAQWRALRYQDMAEYESFAQLLRAPIDD 367
            PEPVLLDT+SIQ DRILLMDTFFQILIYHGETIAQWRAL+YQDM EYE+F QLL+AP+DD
Sbjct: 640  PEPVLLDTASIQADRILLMDTFFQILIYHGETIAQWRALKYQDMPEYENFKQLLQAPVDD 699

Query: 368  AQEILQSRFPVPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYGGAMPIPSADGGAPVLT 547
            AQEILQ+RFP+PRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYG        DGGAPVLT
Sbjct: 700  AQEILQTRFPMPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYG-------QDGGAPVLT 752

Query: 548  DDVSLQ 565
            DDVSLQ
Sbjct: 753  DDVSLQ 758



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +3

Query: 564 KVFMEHLKKLAVSST 608
           ++FMEHLKKLAVS+T
Sbjct: 758 QLFMEHLKKLAVSTT 772


>X77075-1|CAA54348.1|  417|Drosophila melanogaster protein (
           D.melanogaster SCR gene exon1. ).
          Length = 417

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +2

Query: 173 SFGGPPEPVLLDTSSIQPDRILLMDTFFQILIYHGETIAQWRALRYQDMAEYE 331
           ++GG   P ++D + +QP R+LL     Q    H    A   A + Q +A+ +
Sbjct: 100 AYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAAAAVAAQQQQQLAQQQ 152


>AE014297-522|AAS65104.1|  417|Drosophila melanogaster CG1030-PC,
           isoform C protein.
          Length = 417

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +2

Query: 173 SFGGPPEPVLLDTSSIQPDRILLMDTFFQILIYHGETIAQWRALRYQDMAEYE 331
           ++GG   P ++D + +QP R+LL     Q    H    A   A + Q +A+ +
Sbjct: 100 AYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAAAAVAAQQQQQLAQQQ 152


>AE014297-521|AAS65103.1|  417|Drosophila melanogaster CG1030-PB,
           isoform B protein.
          Length = 417

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +2

Query: 173 SFGGPPEPVLLDTSSIQPDRILLMDTFFQILIYHGETIAQWRALRYQDMAEYE 331
           ++GG   P ++D + +QP R+LL     Q    H    A   A + Q +A+ +
Sbjct: 100 AYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAAAAVAAQQQQQLAQQQ 152


>AE014297-520|AAF54082.1|  417|Drosophila melanogaster CG1030-PA,
           isoform A protein.
          Length = 417

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +2

Query: 173 SFGGPPEPVLLDTSSIQPDRILLMDTFFQILIYHGETIAQWRALRYQDMAEYE 331
           ++GG   P ++D + +QP R+LL     Q    H    A   A + Q +A+ +
Sbjct: 100 AYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAAAAVAAQQQQQLAQQQ 152


>AE001572-5|AAD19795.1|  417|Drosophila melanogaster homeodomain
           protein protein.
          Length = 417

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +2

Query: 173 SFGGPPEPVLLDTSSIQPDRILLMDTFFQILIYHGETIAQWRALRYQDMAEYE 331
           ++GG   P ++D + +QP R+LL     Q    H    A   A + Q +A+ +
Sbjct: 100 AYGGQGNPDMVDYTQLQPQRLLLQQQQQQQQQQHAHAAAAVAAQQQQQLAQQQ 152


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,139,172
Number of Sequences: 53049
Number of extensions: 767731
Number of successful extensions: 2197
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2193
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)