Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_D24
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132858-2|CAB60476.2| 821|Caenorhabditis elegans Hypothetical ... 259 1e-69
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 30 1.2
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z68749-7|CAA92962.2| 728|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68219-9|CAA92483.2| 728|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical pr... 29 3.7
AY851363-1|AAW34127.1| 728|Caenorhabditis elegans fibulin-1D sp... 29 3.7
AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D pr... 29 3.7
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical... 29 3.7
AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1 iso... 29 3.7
AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1 iso... 29 3.7
AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1 iso... 29 3.7
AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1 iso... 29 3.7
AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C pr... 29 3.7
U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily ass... 28 4.8
AF067618-2|AAC19195.1| 920|Caenorhabditis elegans Nuclear hormo... 28 6.4
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 27 8.4
U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified vi... 27 8.4
>AL132858-2|CAB60476.2| 821|Caenorhabditis elegans Hypothetical
protein Y113G7A.3 protein.
Length = 821
Score = 259 bits (635), Expect = 1e-69
Identities = 123/186 (66%), Positives = 144/186 (77%)
Frame = +2
Query: 8 ENFSLYPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFGGP 187
+ FSL+PQFM+HLRRSQFLQVFNNSPDET +YRH+L E++ +S MIQP+L+SYSF GP
Sbjct: 630 DKFSLFPQFMFHLRRSQFLQVFNNSPDETAYYRHILFSENVLESTTMIQPVLFSYSFNGP 689
Query: 188 PEPVLLDTSSIQPDRILLMDTFFQILIYHGETIAQWRALRYQDMAEYESFAQLLRAPIDD 367
PEPVLLDTSSI DRILLMD +F +LIYHG+TIAQWR + + +Y +F QLL AP+ D
Sbjct: 690 PEPVLLDTSSILADRILLMDDYFHVLIYHGQTIAQWRKQNFHENPQYATFKQLLEAPVAD 749
Query: 368 AQEILQSRFPVPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAYGGAMPIPSADGGAPVLT 547
A ILQ RFP+PRYI TEH GSQARFLLSKVNPS THNN YA + G+ V T
Sbjct: 750 ATSILQERFPMPRYIVTEHEGSQARFLLSKVNPSLTHNNPYA---------NEAGSAVFT 800
Query: 548 DDVSLQ 565
DDVSLQ
Sbjct: 801 DDVSLQ 806
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 30.7 bits (66), Expect = 0.91
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 452 SKVNPSQTHNNMYA-YGGAMPIPSADGGAPVLTDDVSLQGVYG 577
SK S NN +A GG P P+ADG DDV ++ G
Sbjct: 637 SKSPVSGASNNPFANLGGPSPAPAADGAGRAPQDDVGMRAARG 679
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 171 TASVVRPSQYCWTHPLSSLTVSC 239
TA+ PSQYC + LS+LT+SC
Sbjct: 10 TATYTAPSQYCPSTVLSNLTLSC 32
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 171 TASVVRPSQYCWTHPLSSLTVSC 239
TA+ PSQYC + LS+LT+SC
Sbjct: 10 TATYTAPSQYCPSTVLSNLTLSC 32
>Z68749-7|CAA92962.2| 728|Caenorhabditis elegans Hypothetical
protein F56H11.1c protein.
Length = 728
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 564 CRDTSSVNTGAPPSADGIGIAPPYAYILL*VCD-GLTLDKRNRACEPPCSVSIYLGTGKR 388
C D + TG + + + P +Y +CD G L CE SI+ G+G
Sbjct: 472 CEDVNECTTGIA-ACEQKCVNIPGSYQC--ICDRGFALGPDGTKCEDIDECSIWAGSGND 528
Query: 387 LCNISCASSMGA 352
LC C ++ G+
Sbjct: 529 LCMGGCINTKGS 540
>Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 564 CRDTSSVNTGAPPSADGIGIAPPYAYILL*VCD-GLTLDKRNRACEPPCSVSIYLGTGKR 388
C D + TG + + + P +Y +CD G L CE SI+ G+G
Sbjct: 433 CEDVNECTTGIA-ACEQKCVNIPGSYQC--ICDRGFALGPDGTKCEDIDECSIWAGSGND 489
Query: 387 LCNISCASSMGA 352
LC C ++ G+
Sbjct: 490 LCMGGCINTKGS 501
>Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 564 CRDTSSVNTGAPPSADGIGIAPPYAYILL*VCD-GLTLDKRNRACEPPCSVSIYLGTGKR 388
C D + TG + + + P +Y +CD G L CE SI+ G+G
Sbjct: 433 CEDVNECTTGIA-ACEQKCVNIPGSYQC--ICDRGFALGPDGTKCEDIDECSIWAGSGND 489
Query: 387 LCNISCASSMGA 352
LC C ++ G+
Sbjct: 490 LCMGGCINTKGS 501
>Z68219-9|CAA92483.2| 728|Caenorhabditis elegans Hypothetical
protein F56H11.1c protein.
Length = 728
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 564 CRDTSSVNTGAPPSADGIGIAPPYAYILL*VCD-GLTLDKRNRACEPPCSVSIYLGTGKR 388
C D + TG + + + P +Y +CD G L CE SI+ G+G
Sbjct: 472 CEDVNECTTGIA-ACEQKCVNIPGSYQC--ICDRGFALGPDGTKCEDIDECSIWAGSGND 528
Query: 387 LCNISCASSMGA 352
LC C ++ G+
Sbjct: 529 LCMGGCINTKGS 540
>Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 564 CRDTSSVNTGAPPSADGIGIAPPYAYILL*VCD-GLTLDKRNRACEPPCSVSIYLGTGKR 388
C D + TG + + + P +Y +CD G L CE SI+ G+G
Sbjct: 433 CEDVNECTTGIA-ACEQKCVNIPGSYQC--ICDRGFALGPDGTKCEDIDECSIWAGSGND 489
Query: 387 LCNISCASSMGA 352
LC C ++ G+
Sbjct: 490 LCMGGCINTKGS 501
>Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 564 CRDTSSVNTGAPPSADGIGIAPPYAYILL*VCD-GLTLDKRNRACEPPCSVSIYLGTGKR 388
C D + TG + + + P +Y +CD G L CE SI+ G+G
Sbjct: 433 CEDVNECTTGIA-ACEQKCVNIPGSYQC--ICDRGFALGPDGTKCEDIDECSIWAGSGND 489
Query: 387 LCNISCASSMGA 352
LC C ++ G+
Sbjct: 490 LCMGGCINTKGS 501
>AY851363-1|AAW34127.1| 728|Caenorhabditis elegans fibulin-1D
splice variant protein.
Length = 728
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 564 CRDTSSVNTGAPPSADGIGIAPPYAYILL*VCD-GLTLDKRNRACEPPCSVSIYLGTGKR 388
C D + TG + + + P +Y +CD G L CE SI+ G+G
Sbjct: 472 CEDVNECTTGIA-ACEQKCVNIPGSYQC--ICDRGFALGPDGTKCEDIDECSIWAGSGND 528
Query: 387 LCNISCASSMGA 352
LC C ++ G+
Sbjct: 529 LCMGGCINTKGS 540
>AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D
precursor protein.
Length = 589
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 564 CRDTSSVNTGAPPSADGIGIAPPYAYILL*VCD-GLTLDKRNRACEPPCSVSIYLGTGKR 388
C D + TG + + + P +Y +CD G L CE SI+ G+G
Sbjct: 333 CEDVNECTTGIA-ACEQKCVNIPGSYQC--ICDRGFALGPDGTKCEDIDECSIWAGSGND 389
Query: 387 LCNISCASSMGA 352
LC C ++ G+
Sbjct: 390 LCMGGCINTKGS 401
>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
protein B0511.12 protein.
Length = 1634
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -3
Query: 229 VRLDRGCVQQYWLGRTTEAVRVQNR 155
++L+R CV+ +W G+ E + ++NR
Sbjct: 1159 IKLNRECVRAFWAGQQQELIFLRNR 1183
>AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 564 CRDTSSVNTGAPPSADGIGIAPPYAYILL*VCD-GLTLDKRNRACEPPCSVSIYLGTGKR 388
C D + TG + + + P +Y +CD G L CE SI+ G+G
Sbjct: 433 CEDVNECTTGIA-ACEQKCVNIPGSYQC--ICDRGFALGPDGTKCEDIDECSIWAGSGND 489
Query: 387 LCNISCASSMGA 352
LC C ++ G+
Sbjct: 490 LCMGGCINTKGS 501
>AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 564 CRDTSSVNTGAPPSADGIGIAPPYAYILL*VCD-GLTLDKRNRACEPPCSVSIYLGTGKR 388
C D + TG + + + P +Y +CD G L CE SI+ G+G
Sbjct: 433 CEDVNECTTGIA-ACEQKCVNIPGSYQC--ICDRGFALGPDGTKCEDIDECSIWAGSGND 489
Query: 387 LCNISCASSMGA 352
LC C ++ G+
Sbjct: 490 LCMGGCINTKGS 501
>AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 564 CRDTSSVNTGAPPSADGIGIAPPYAYILL*VCD-GLTLDKRNRACEPPCSVSIYLGTGKR 388
C D + TG + + + P +Y +CD G L CE SI+ G+G
Sbjct: 433 CEDVNECTTGIA-ACEQKCVNIPGSYQC--ICDRGFALGPDGTKCEDIDECSIWAGSGND 489
Query: 387 LCNISCASSMGA 352
LC C ++ G+
Sbjct: 490 LCMGGCINTKGS 501
>AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 564 CRDTSSVNTGAPPSADGIGIAPPYAYILL*VCD-GLTLDKRNRACEPPCSVSIYLGTGKR 388
C D + TG + + + P +Y +CD G L CE SI+ G+G
Sbjct: 433 CEDVNECTTGIA-ACEQKCVNIPGSYQC--ICDRGFALGPDGTKCEDIDECSIWAGSGND 489
Query: 387 LCNISCASSMGA 352
LC C ++ G+
Sbjct: 490 LCMGGCINTKGS 501
>AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C
protein.
Length = 712
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -1
Query: 564 CRDTSSVNTGAPPSADGIGIAPPYAYILL*VCD-GLTLDKRNRACEPPCSVSIYLGTGKR 388
C D + TG + + + P +Y +CD G L CE SI+ G+G
Sbjct: 433 CEDVNECTTGIA-ACEQKCVNIPGSYQC--ICDRGFALGPDGTKCEDIDECSIWAGSGND 489
Query: 387 LCNISCASSMGA 352
LC C ++ G+
Sbjct: 490 LCMGGCINTKGS 501
>U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily
assigned gene nameprotein 117 protein.
Length = 668
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 387 AVSLYLDILTPNMVVHRLGSFYPRSTHRKLIIIC 488
A+ +Y D LT VV L P++THR+ I++C
Sbjct: 447 AIGVYSDFLTYEEVVLEL----PKATHRRPIVLC 476
>AF067618-2|AAC19195.1| 920|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 266 protein.
Length = 920
Score = 27.9 bits (59), Expect = 6.4
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Frame = +2
Query: 311 QDMAEYESFAQLLRAPIDDAQEILQSRFPVPRYI---DTEHGGSQ-----ARFLLSKVNP 466
+D+ E +L+ D +E+L+ ++ P I D H + A+ +L+K+N
Sbjct: 81 RDLDEMAEKFTILKKITQDDRELLEMKYSSPEIISNCDYFHTFNALKENLAKNVLNKLNI 140
Query: 467 SQTHNNMYAYGGAMPIPSADGGAPVLTDDVSLQGVYGT-SEEAGSLLDCLNMSQ 625
+++ N + P+AD G +L L G+Y T S S + LN S+
Sbjct: 141 TESINTTGKPWAEIEQPAADLGRAILAARDVLPGIYITDSSITESRFNSLNFSE 194
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 16 QPVPAVHVSPASLAVPAG-LQ*FTRRDNLLQAHADA 120
+P+ AVHV A PA + T+ D+ + HADA
Sbjct: 450 EPITAVHVEATESAAPADKVHEETKIDSAAETHADA 485
>U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 7 protein.
Length = 357
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 258 WKNVSISRIRSGWIEDVSSSTGSGGPPKLY 169
WKN+ + I SG +ED + G+ PP+++
Sbjct: 9 WKNIHVFVI-SGKLEDANPEDGNAKPPEIH 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,002,701
Number of Sequences: 27780
Number of extensions: 368914
Number of successful extensions: 1068
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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