Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_D21
(660 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 32 0.47
03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-76... 32 0.47
10_06_0020 - 9693126-9693437,9694940-9695368 31 0.61
03_05_0882 + 28467691-28467730,28468386-28468675,28469262-284694... 31 0.81
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 30 1.4
04_04_1287 - 32390422-32391588,32392472-32392645 30 1.9
06_01_0410 + 2928382-2930973 29 2.5
07_03_1287 + 25510813-25510862,25511326-25511504,25511715-255120... 29 3.3
02_01_0264 - 1748883-1748888,1748943-1749017,1749453-1749868,175... 29 3.3
01_06_0014 + 25583997-25584372,25584411-25584445 29 3.3
11_06_0087 - 19919224-19922304 29 4.3
09_06_0261 - 21919017-21920594 29 4.3
05_06_0060 - 25266735-25267210,25267323-25267569,25267650-252683... 29 4.3
04_03_0938 + 20933008-20933288,20933408-20933473,20933568-20934099 29 4.3
02_05_0806 - 31867656-31867724,31867872-31867929,31868038-318682... 29 4.3
02_02_0308 - 8828217-8828385,8828676-8828731 29 4.3
10_06_0180 + 11526139-11526172,11526365-11527218 28 5.7
09_06_0067 - 20645012-20645095,20645365-20645466,20645583-206458... 28 5.7
07_03_1791 - 29552218-29552427,29552858-29553358,29560369-295604... 28 5.7
06_01_1178 + 10131844-10131993,10132103-10132171,10132446-101324... 28 5.7
03_06_0400 + 33673429-33673560,33674611-33674788,33674933-336751... 28 5.7
02_01_0642 - 4803464-4805665,4806231-4806320 28 5.7
01_06_1763 + 39723596-39723691,39724030-39724672,39724773-397252... 28 5.7
01_05_0801 + 25353708-25353914,25354307-25354429,25355035-253552... 28 5.7
08_02_1545 - 27790328-27790358,27790512-27791110,27791428-277916... 28 7.6
04_04_0549 - 26179668-26181176 28 7.6
01_03_0130 + 12853325-12853948,12854657-12854822,12854907-128551... 28 7.6
>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/74 (24%), Positives = 37/74 (50%)
Frame = +1
Query: 220 ETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVNIYKRQLTEQEGVSQQSVT 399
E K+L + E + +E++I+ EE+ K + LQD++ + + + L + +Q
Sbjct: 1528 ELKKVLSETEYRNEELVIKIEEENKKVEHLQDTITMLKENIAVQAANLEAE----RQEND 1583
Query: 400 RVRRFQRELEAAED 441
R+R+ E + D
Sbjct: 1584 RIRKSLVEAQERND 1597
>03_01_0096 +
763850-764027,764873-765189,765262-765433,765513-765586,
765658-765835,765917-766026,766122-766221,766305-766391,
766505-766681,766847-767120,767201-767362,767450-767665,
767744-767781,768044-768102,768214-768339,768415-768540,
768642-768695,768789-768851,768924-768986,769079-769141,
769232-769732
Length = 1045
Score = 31.9 bits (69), Expect = 0.47
Identities = 19/79 (24%), Positives = 38/79 (48%)
Frame = +1
Query: 223 TIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVNIYKRQLTEQEGVSQQSVTR 402
T K++ K E+Q++E+ QC + S+E T+Q++ K +L ++ S
Sbjct: 250 TSKLISKYEKQIEELTNQCNMKSDECYMAWSSVESTNQELERLKIELHQKVMQSDNIEQV 309
Query: 403 VRRFQRELEAAEDRADTAE 459
V R +L + + + A+
Sbjct: 310 VDRQADQLRSVSQKYENAK 328
>10_06_0020 - 9693126-9693437,9694940-9695368
Length = 246
Score = 31.5 bits (68), Expect = 0.61
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -3
Query: 541 GPGRPGSQGRWRW*RKCGAWHVSKRGCSQQY 449
GP R G++G WR R+ +W S++ CS+++
Sbjct: 102 GPTRGGARGSWRRRRRSCSWWSSQQWCSRRH 132
>03_05_0882 +
28467691-28467730,28468386-28468675,28469262-28469411,
28470126-28470214,28470331-28470440,28470545-28470639,
28471110-28471162,28471374-28471539,28471909-28472001,
28472304-28472432,28472549-28472668,28472862-28472942,
28473495-28473602,28473895-28474038,28474120-28474218,
28474300-28474379,28474830-28474922,28475197-28475320
Length = 687
Score = 31.1 bits (67), Expect = 0.81
Identities = 24/92 (26%), Positives = 49/92 (53%)
Frame = +1
Query: 220 ETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVNIYKRQLTEQEGVSQQSVT 399
+T++ L+ +ER L++ + Q E KN+ L +S + SQ + R +E++ +++ T
Sbjct: 182 KTLEALKDRERALQDQLRQATESVKNMQKLHESAQ--SQLFEL--RTQSEEDRAAKE--T 235
Query: 400 RVRRFQRELEAAEDRADTAESNLSLIRAKHRT 495
V E+E A+ R + E +R++ +T
Sbjct: 236 EVNLLLDEVERAQARLVSLEREKGDLRSQLQT 267
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +1
Query: 235 LRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVN--IYKRQLTEQEGVS--QQSVTR 402
L +K+ Q+ + EE ++ IS L+ LE+ K+ I K Q ++ + QQS T
Sbjct: 854 LEQKQSQVSALEQANEELREKISSLERQLEEARSKLQDEIIKLQGEKERALDNLQQSNTS 913
Query: 403 VRRFQRELE 429
++ F+ ELE
Sbjct: 914 IKTFEEELE 922
>04_04_1287 - 32390422-32391588,32392472-32392645
Length = 446
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/71 (26%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +1
Query: 232 ILRKKERQL--KEVIIQCEED-QKNISLLQDSLEKTSQKVNIYKRQLTEQEGVSQQSVTR 402
+L+++++QL + ++Q E++ K + D LE + ++I + +L + S+ + T
Sbjct: 42 LLQERDQQLISLQALLQKEQEISKEMRRKMDELEAKTSVLSIERTELKNKLMDSETTTTY 101
Query: 403 VRRFQRELEAA 435
+ Q+ELEAA
Sbjct: 102 LTNTQKELEAA 112
>06_01_0410 + 2928382-2930973
Length = 863
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +3
Query: 495 FRHHLHRPWLPGLPGPG----VSCSQQ*TSVNTLRLSIPTSERSNLRPITSISL*QLKL 659
F +HLH PW PG V +Q + L+ + P S R++++P+ I KL
Sbjct: 634 FANHLHAPWDPGGSNLDTLLHVRKDRQQPQLQPLQNAFPDSVRADMKPLLQIMALMTKL 692
>07_03_1287 +
25510813-25510862,25511326-25511504,25511715-25512037,
25512160-25513950
Length = 780
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Frame = +1
Query: 307 LQDSLEKTSQKVNIYKRQLTEQEGVSQQSVTRV---RRFQRELEAAEDRADTAE------ 459
+Q LEK +++ +YK +L E V Q V + RR EL+ ++A E
Sbjct: 189 IQLELEKVQKEIPLYKEELEAAEMVKSQVVNELEDTRRIIEELKHNLEKAQVEEVQAKQD 248
Query: 460 SNLSLIRAK 486
S L+L+RA+
Sbjct: 249 SELALLRAQ 257
>02_01_0264 -
1748883-1748888,1748943-1749017,1749453-1749868,
1750095-1750215,1750423-1750533,1750636-1750737,
1750896-1750989,1751145-1751194,1751323-1751424,
1751794-1751871,1751999-1752028,1752322-1753050
Length = 637
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +1
Query: 217 AETIKILRKKERQLKE------VIIQCEEDQKNISLLQDSLEKTSQKVNIYKRQLTEQEG 378
A+ K++++++RQL++ V + + + I L D EK + + ++E
Sbjct: 531 AKNRKLMQQQQRQLEQLPGPDTVTVSTAQYEALIKRLGDLEEKVAALTSRPPEMPADKED 590
Query: 379 VSQQSVTRVRRFQRELEAAEDRADTA 456
+ + +VTRV + ELE+ + +T+
Sbjct: 591 LLKAAVTRVEALETELESTKKLLETS 616
>01_06_0014 + 25583997-25584372,25584411-25584445
Length = 136
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -3
Query: 511 WRW*R-KCGAWHVSKRGCSQQYRRGLPQLPVRVGIVELLSHSAGIH 377
WRW KC H + R Y +P P G VEL H AG+H
Sbjct: 60 WRWRHMKCRMVHGANRRRDAIYAIQIPVTPN--GNVELTCHDAGLH 103
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = -1
Query: 594 WRVVMCSQTFTAESTRLLDQVDLGARDGGGGDESAVLGTYQREVALSSIGAV 439
WR V CS L + D A GGGG E G Y AL +GA+
Sbjct: 60 WRGVRCSNRTNGHVVALRLRNDAAAAAGGGGAEHDDRGYYAGGAAL--VGAI 109
>09_06_0261 - 21919017-21920594
Length = 525
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 594 WRVVMCSQTFTAESTRLLDQVDLGARDGGGGDESA 490
WR V+ + + + R+ D L DGGGG+ A
Sbjct: 90 WRAVLLQEEWFLDERRIRDAAGLLPADGGGGEVPA 124
>05_06_0060 -
25266735-25267210,25267323-25267569,25267650-25268345,
25268457-25268709,25268786-25269261,25270760-25270909
Length = 765
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 192 FEFHVLQALPVAYDALPPTRRSF 124
+EF VLQ +PV+ D L P SF
Sbjct: 519 YEFSVLQGMPVSRDTLSPNNVSF 541
>04_03_0938 + 20933008-20933288,20933408-20933473,20933568-20934099
Length = 292
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = -1
Query: 543 LDQVDLGARDGGGGDESAVLGTYQREVALSSIGAVFRSFQFALESSNSCHTL 388
L + ARDGGGG VL + A + VF + FAL + H L
Sbjct: 34 LRRAGFAARDGGGGGGVVVLERHAELRATGAALTVFPNGWFALRALGIAHKL 85
>02_05_0806 -
31867656-31867724,31867872-31867929,31868038-31868212,
31868297-31868373,31868434-31868537
Length = 160
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 516 PWLPGLPGPGVSCSQQ*TSVNTLRLSIPTSERSN 617
PW P PGPG+ C + S + ++IP + N
Sbjct: 46 PWFPKPPGPGLPCPDR--SYRGIYITIPCGKPEN 77
>02_02_0308 - 8828217-8828385,8828676-8828731
Length = 74
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 124 PLLPADRDILNFDPRAEFLQPGGSTI 47
PLL +D DIL++ P A+ L+ GG +
Sbjct: 47 PLLVSDEDILHYYPLAKTLKSGGDRV 72
>10_06_0180 + 11526139-11526172,11526365-11527218
Length = 295
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 531 DLGARDGGGGDESAVLGTYQREVALSSIGAVFRSFQ 424
D G GGGG LG +R +A + A+ RSF+
Sbjct: 37 DDGGGGGGGGGGGGGLGEKKRRLAAEQVRALERSFE 72
>09_06_0067 -
20645012-20645095,20645365-20645466,20645583-20645828,
20646042-20646236,20646343-20646636,20646952-20647134,
20647534-20647593,20647796-20648002,20648081-20648282,
20648367-20648494,20648759-20648842,20648955-20649134,
20649281-20649372,20649620-20649789,20650226-20650337,
20650451-20650554,20651262-20651371
Length = 850
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = +1
Query: 232 ILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVNIYKRQLTE 369
+LR++ R +KE + ++D+ +++ L+ ++ NI+K E
Sbjct: 280 LLRQQMRAIKEELGDNDDDEDDVAALERKMQNAGMPANIWKHAQRE 325
>07_03_1791 -
29552218-29552427,29552858-29553358,29560369-29560449,
29563783-29564015,29564976-29565042
Length = 363
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 367 EQEGVSQQSVTRVRRFQRELEAAEDRADTAESNLSLIRAKHRT 495
EQ+ SQ+ R + +R +A E+RA + S + + RT
Sbjct: 131 EQDARSQEQAQRAQELERRAKALEERARLLDQRESTLASHERT 173
>06_01_1178 +
10131844-10131993,10132103-10132171,10132446-10132451,
10132571-10132930,10133983-10134201,10134905-10135054
Length = 317
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +1
Query: 220 ETIKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVNIYKRQLTEQEGV 381
+ I +LR++ +L++ +++ EE K+ L + V+ +RQ+ ++EG+
Sbjct: 130 DEIVLLREQIEELQKTLLEKEEALKSAESLVGEMNTLYSTVDELRRQVADKEGL 183
>03_06_0400 +
33673429-33673560,33674611-33674788,33674933-33675100,
33675207-33675382,33675508-33675666,33676093-33676230,
33676294-33676355,33676509-33676644,33677174-33677268,
33677520-33677635,33677716-33677845,33677938-33677992,
33678065-33678205
Length = 561
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 621 VGWSAQKLVWRVV-MCSQTFTAESTRLLDQVDLGARDGGGGDESA 490
+ W+A KL W +V M S T ++R ++ D+G+R G E A
Sbjct: 213 IDWNANKLKWEIVDMGSLNGTFLNSRSVNHPDVGSRRWGEPAELA 257
>02_01_0642 - 4803464-4805665,4806231-4806320
Length = 763
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = +1
Query: 226 IKILRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVN-IYKRQLTEQEGVSQQS--- 393
+ LRKKER L++ + DQ ++ + L++ + +N Y RQ + + + S
Sbjct: 116 LSTLRKKERDLRDAENRVSVDQVRLNRAKKDLDQRERGINRAYARQQEMERSLGKASRDL 175
Query: 394 VTRVRRFQRELEAAEDRADTAESNLSLIRAK 486
V +VR+ +++ S+ L+ K
Sbjct: 176 VLQVRQIDNLKLLVDEQDKKIASSQDLLSQK 206
>01_06_1763 +
39723596-39723691,39724030-39724672,39724773-39725275,
39725786-39725905,39726356-39726421,39727146-39727256,
39727650-39727726,39727996-39728063,39728384-39728497,
39728593-39728774,39728926-39728994,39729294-39729449,
39729657-39729734
Length = 760
Score = 28.3 bits (60), Expect = 5.7
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Frame = +1
Query: 241 KKERQLKEVIIQCEEDQKNISLLQDSLEKTS--QKVNIYKRQLTEQEGVS---QQSVTRV 405
+KERQ + ++ +++K LL L TS +KVNI ++ ++ S + T
Sbjct: 546 EKERQHLQSTVEALQEEKK--LLHSKLRNTSVTEKVNIIEKPSADKRDASTATEDLDTGE 603
Query: 406 RRFQRELEAAEDRADTAESNLSLI-RAKHRTFV--TTSTVPGSQVYLVQESRALSSE 567
L +A D + E+++S T++ +S++P Q+ ++ +L SE
Sbjct: 604 SSSSETLTSAIDTVEDGETSVSRSNNVADFTYLEEVSSSIPHDQLRMIDNINSLMSE 660
>01_05_0801 + 25353708-25353914,25354307-25354429,25355035-25355205,
25355303-25355392,25355497-25355583,25355664-25355719,
25355812-25355905,25356032-25356144,25356211-25356283,
25356603-25356683,25356865-25356951,25357031-25357135,
25357279-25357385,25357481-25357541,25357931-25358158,
25359720-25360677,25360816-25360997,25361237-25361326,
25361422-25361709,25361844-25362056,25362560-25362784
Length = 1212
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +1
Query: 235 LRKKERQLKEVIIQCEEDQKNISLLQDSLEKTSQKVNIYKRQLTEQEGVSQQSVTRVRRF 414
L + ++L E+ + + D++ ++ +K + K + K EQE + + VR
Sbjct: 914 LNTRSKELDEIAAKSDYDRR---IIDQEKQKNAIKSSHLKLATLEQERADENVLKLVREH 970
Query: 415 QRELEAA 435
+RE EAA
Sbjct: 971 KREKEAA 977
>08_02_1545 -
27790328-27790358,27790512-27791110,27791428-27791648,
27791852-27792071
Length = 356
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 593 GES*CVHRRSLLRARDSWTR*TWEPGTVEVVTKVRC 486
GE C R ++ + + W + TWE VEV+ VRC
Sbjct: 8 GEDKCEMRDTVDKKKQEW-KLTWEEKVVEVLHIVRC 42
>04_04_0549 - 26179668-26181176
Length = 502
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = -1
Query: 513 GGGGDESAVLGTYQREVALSSI 448
GGGG+E+A +GT Q + AL+S+
Sbjct: 438 GGGGEETAEVGTEQVKRALNSL 459
>01_03_0130 +
12853325-12853948,12854657-12854822,12854907-12855118,
12855372-12855865,12856228-12856276,12856367-12856690
Length = 622
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 465 PLFDTCQAPHFRHHLHRPWLPGLPGPGVSCSQQ 563
PLF C PH HHLH LP L QQ
Sbjct: 36 PLFPRCPHPH--HHLHGRRLPFLASAASQQQQQ 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,383,022
Number of Sequences: 37544
Number of extensions: 421257
Number of successful extensions: 1694
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1692
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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