Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_D20
(342 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC017876-1|AAH17876.1| 416|Homo sapiens asparagine-linked glyco... 34 0.13
AL137067-1|CAC07999.1| 416|Homo sapiens asparagine-linked glyco... 34 0.13
AK075172-1|BAC11449.1| 416|Homo sapiens protein ( Homo sapiens ... 34 0.13
AK074704-1|BAC11150.1| 416|Homo sapiens protein ( Homo sapiens ... 34 0.13
AK027417-1|BAB55099.1| 416|Homo sapiens protein ( Homo sapiens ... 34 0.13
AB161356-1|BAD11905.1| 416|Homo sapiens asparagine-linked glyco... 34 0.13
BC081538-1|AAH81538.1| 202|Homo sapiens Unknown (protein for IM... 30 2.2
BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific pept... 29 2.9
BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein. 29 2.9
AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific prot... 29 2.9
AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens ... 29 2.9
AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific prot... 29 2.9
>BC017876-1|AAH17876.1| 416|Homo sapiens asparagine-linked
glycosylation 2 homolog (S. cerevisiae,
alpha-1,3-mannosyltra protein.
Length = 416
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -3
Query: 142 HCRGRRQRVVMRCGAVW--RGAGW-GRPLAKSALIRALNLHLYTLHI 11
HC + + +RC W RG GW GR A A +R + L LY L +
Sbjct: 58 HCFAESRELPVRCAGDWLPRGLGWGGRGAAVCAYVRMVFLALYVLFL 104
>AL137067-1|CAC07999.1| 416|Homo sapiens asparagine-linked
glycosylation 2 homolog (S. cerevisiae,
alpha-1,3-mannosyltra protein.
Length = 416
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -3
Query: 142 HCRGRRQRVVMRCGAVW--RGAGW-GRPLAKSALIRALNLHLYTLHI 11
HC + + +RC W RG GW GR A A +R + L LY L +
Sbjct: 58 HCFAESRELPVRCAGDWLPRGLGWGGRGAAVCAYVRMVFLALYVLFL 104
>AK075172-1|BAC11449.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ90691 fis, clone PLACE1006290, weakly similar to
GLYCOSYLTRANSFERASE ALG2 (EC 2.4.1.-). ).
Length = 416
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -3
Query: 142 HCRGRRQRVVMRCGAVW--RGAGW-GRPLAKSALIRALNLHLYTLHI 11
HC + + +RC W RG GW GR A A +R + L LY L +
Sbjct: 58 HCFAESRELPVRCAGDWLPRGLGWGGRGAAVCAYVRMVFLALYVLFL 104
>AK074704-1|BAC11150.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ90223 fis, clone NT2RM1000580, weakly similar to
GLYCOSYLTRANSFERASE ALG2 (EC 2.4.1.-). ).
Length = 416
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -3
Query: 142 HCRGRRQRVVMRCGAVW--RGAGW-GRPLAKSALIRALNLHLYTLHI 11
HC + + +RC W RG GW GR A A +R + L LY L +
Sbjct: 58 HCFAESRELPVRCAGDWLPRGLGWGGRGAAVCAYVRMVFLALYVLFL 104
>AK027417-1|BAB55099.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ14511 fis, clone NT2RM1000648, weakly similar to
GLYCOSYLTRANSFERASE ALG2 (EC 2.4.1.-). ).
Length = 416
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -3
Query: 142 HCRGRRQRVVMRCGAVW--RGAGW-GRPLAKSALIRALNLHLYTLHI 11
HC + + +RC W RG GW GR A A +R + L LY L +
Sbjct: 58 HCFAESRELPVRCAGDWLPRGLGWGGRGAAVCAYVRMVFLALYVLFL 104
>AB161356-1|BAD11905.1| 416|Homo sapiens asparagine-linked
glycosylation 2 protein.
Length = 416
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -3
Query: 142 HCRGRRQRVVMRCGAVW--RGAGW-GRPLAKSALIRALNLHLYTLHI 11
HC + + +RC W RG GW GR A A +R + L LY L +
Sbjct: 58 HCFAESRELPVRCAGDWLPRGLGWGGRGAAVCAYVRMVFLALYVLFL 104
>BC081538-1|AAH81538.1| 202|Homo sapiens Unknown (protein for
IMAGE:30530665) protein.
Length = 202
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 27 RCRLSARMSADLASGRPQPAPRHTAPH 107
RC +S +S + PQPAPR + PH
Sbjct: 158 RCSVSRAISGSRPTVMPQPAPRASTPH 184
>BC132862-1|AAI32863.1| 1316|Homo sapiens ubiquitin specific peptidase
42 protein.
Length = 1316
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 44 ADERRLSERPSPACAAPHRTAPHHDTLSSPSTVM 145
A ER SP APH APH D S T +
Sbjct: 1106 ARERERHRPSSPRAGAPHALAPHPDRFSHDRTAL 1139
>BC060846-1|AAH60846.2| 1202|Homo sapiens USP42 protein protein.
Length = 1202
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 44 ADERRLSERPSPACAAPHRTAPHHDTLSSPSTVM 145
A ER SP APH APH D S T +
Sbjct: 1106 ARERERHRPSSPRAGAPHALAPHPDRFSHDRTAL 1139
>AY618868-1|AAT67238.1| 1324|Homo sapiens ubiquitin specific protease
42 protein.
Length = 1324
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 44 ADERRLSERPSPACAAPHRTAPHHDTLSSPSTVM 145
A ER SP APH APH D S T +
Sbjct: 1106 ARERERHRPSSPRAGAPHALAPHPDRFSHDRTAL 1139
>AK022759-1|BAB14232.1| 1198|Homo sapiens protein ( Homo sapiens cDNA
FLJ12697 fis, clone NT2RP1000522, weakly similar to
UBIQUITIN CARBOXYL-TERMINAL HYDROLASE DUB-1 (EC
3.1.2.15). ).
Length = 1198
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 44 ADERRLSERPSPACAAPHRTAPHHDTLSSPSTVM 145
A ER SP APH APH D S T +
Sbjct: 1106 ARERERHRPSSPRAGAPHALAPHPDRFSHDRTAL 1139
>AJ601395-1|CAE53097.1| 1325|Homo sapiens ubiquitin-specific protease
42 protein.
Length = 1325
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 44 ADERRLSERPSPACAAPHRTAPHHDTLSSPSTVM 145
A ER SP APH APH D S T +
Sbjct: 1106 ARERERHRPSSPRAGAPHALAPHPDRFSHDRTAL 1139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,286,549
Number of Sequences: 237096
Number of extensions: 840485
Number of successful extensions: 6494
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6480
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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