Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_D17
(508 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 25 0.60
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 23 1.8
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 3.2
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 3.2
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 3.2
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 3.2
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 3.2
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 3.2
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 3.2
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 3.2
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 4.2
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 5.6
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 21 7.3
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 21 7.3
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 21 7.3
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 24.6 bits (51), Expect = 0.60
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 215 LQNRQEQRNETLAARSEAGAQKIEAQGLLQDPGR 316
L +R RN L ++E+QG DPGR
Sbjct: 109 LHSRLPGRNFNLLRADANSVNELESQGFNYDPGR 142
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 432 RFKEVGEAYGILSD 473
RF+EV E YGIL +
Sbjct: 60 RFEEVSEKYGILQN 73
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 15 NNRTVNAKLYYN 50
NN N KLYYN
Sbjct: 98 NNNNYNKKLYYN 109
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 15 NNRTVNAKLYYN 50
NN N KLYYN
Sbjct: 104 NNNNYNKKLYYN 115
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 15 NNRTVNAKLYYN 50
NN N KLYYN
Sbjct: 104 NNNNYNKKLYYN 115
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 15 NNRTVNAKLYYN 50
NN N KLYYN
Sbjct: 100 NNNNYNKKLYYN 111
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 15 NNRTVNAKLYYN 50
NN N KLYYN
Sbjct: 100 NNNNYNKKLYYN 111
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 15 NNRTVNAKLYYN 50
NN N KLYYN
Sbjct: 100 NNNNYNKKLYYN 111
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 15 NNRTVNAKLYYN 50
NN N KLYYN
Sbjct: 100 NNNNYNKKLYYN 111
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 15 NNRTVNAKLYYN 50
NN N KLYYN
Sbjct: 336 NNNNYNKKLYYN 347
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.2
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 503 SVIVTGTFLGITEDAVSLT-HFLEPALLFASLGVRSTCVPVRVVDQSPLP 357
+V++ +G E +S E ALL +LGV+ V V +D + P
Sbjct: 112 AVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPP 161
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 5.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 268 WRSKNRSARTITRSWA 315
W +RSAR + + WA
Sbjct: 573 WHPSDRSARLMLQPWA 588
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 21.0 bits (42), Expect = 7.3
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 491 TGTF-LGITEDAVSLTHFLEPALLFASLGVRSTCVPVRVVDQSPLP 357
TG F GI+++ + H ALL +LGV+ V V +D + P
Sbjct: 47 TGEFEAGISKNGQTREH----ALLAFTLGVKQLIVGVNKMDSTEPP 88
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 21.0 bits (42), Expect = 7.3
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 491 TGTF-LGITEDAVSLTHFLEPALLFASLGVRSTCVPVRVVDQSPLP 357
TG F GI+++ + H ALL +LGV+ V V +D + P
Sbjct: 63 TGEFEAGISKNGQTREH----ALLAFTLGVKQLIVGVNKMDSTEPP 104
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.3
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 491 TGTF-LGITEDAVSLTHFLEPALLFASLGVRSTCVPVRVVDQSPLP 357
TG F GI+++ + H ALL +LGV+ V V +D + P
Sbjct: 120 TGEFEAGISKNGQTREH----ALLAFTLGVKQLIVGVNKMDSTEPP 161
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,622
Number of Sequences: 438
Number of extensions: 2790
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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