Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_D11
(645 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|ch... 283 2e-77
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 225 4e-60
SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyc... 65 9e-12
SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2 |Schizosacc... 58 1e-09
SPBC428.17c |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.76
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.0
SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3 |Schizos... 28 1.0
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 28 1.3
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 1.8
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 27 3.1
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 4.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.3
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 26 5.3
SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces p... 26 5.3
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 26 5.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 7.1
SPBC354.02c |sec61||translocon alpha subunit Sec61|Schizosacchar... 25 7.1
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 25 9.3
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 9.3
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 25 9.3
>SPAC24C9.06c |||aconitate hydratase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 283 bits (694), Expect = 2e-77
Identities = 131/211 (62%), Positives = 158/211 (74%)
Frame = +1
Query: 10 DIRVGLIGSCTNSSYEDMGRCASIVKEALNHGLKSKIPFNVTPGSEQIRATIERDGIAQT 189
+++VGLIGSCTNSSYEDM R ASI ++A++ G+K+K F +TPGSEQ+RAT+ RDG T
Sbjct: 372 ELKVGLIGSCTNSSYEDMSRAASICQQAIDKGIKTKSLFTITPGSEQVRATLTRDGQLDT 431
Query: 190 LRDFGGTVLANACGPCIGQWDRRDVKKGEKNTIVTSYNRNFTGRNDANPATHCFVTSPEL 369
+R GG VLANACGPCIGQW R DVKKGEKN+IVTSYNRNFTGRNDANPATH FVTSP++
Sbjct: 432 MRKAGGIVLANACGPCIGQWKRTDVKKGEKNSIVTSYNRNFTGRNDANPATHAFVTSPDI 491
Query: 370 VTALSIAGRLDFNPLSDELTGTDGKKFKLSDPFADELPSKGFDPGQDTYEHPPADGSKVQ 549
VTA+ +G ++FNPL+D L DG FK P LPSKG+DPG +TY P + K
Sbjct: 492 VTAMVFSGDMNFNPLTDTLKDKDGNDFKFEPPTGAGLPSKGYDPGSNTYVAPSSVNVK-D 550
Query: 550 VDVSPKSDRLQLLAPFDKWDGNDLTEMTILI 642
V + P S RLQ L PF KWDG D+ + ILI
Sbjct: 551 VAIDPHSKRLQRLTPFKKWDGKDMKGLKILI 581
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 225 bits (550), Expect = 4e-60
Identities = 109/213 (51%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Frame = +1
Query: 13 IRVGLIGSCTNSSYEDMGRCASIVKEALNHGLKSKIPFNVTPGSEQIRATIERDGIAQTL 192
+ GLIGSCTNSSY+DM +V++A++ GLK K+PF VTPGSEQIRATIERDGI + L
Sbjct: 380 LSAGLIGSCTNSSYQDMTCVVDVVEQAISAGLKPKVPFLVTPGSEQIRATIERDGITERL 439
Query: 193 RDFGGTVLANACGPCIGQWDRR-DVKKGEKNTIVTSYNRNFTGRNDANPATHCFVTSPEL 369
+ G TVLANACGPCIG W R D+ GE N I+TS+NRNF RND NP+T F+TSP +
Sbjct: 440 EEAGATVLANACGPCIGMWKRTDDIASGEPNAILTSFNRNFRSRNDGNPSTMNFLTSPVI 499
Query: 370 VTALSIAGRLDFNPLSDELTGTDGKKFKLSDPFADELPSKGFDPGQDTY--EHPPADGSK 543
V A + L F+P D L DGK FK P ELPS GF G +Y E P +
Sbjct: 500 VAAKIFSSDLAFDPTHDTLQTPDGKAFKFRPPQGVELPSAGFIAGDSSYIPEPNPQPVPE 559
Query: 544 VQVDVSPKSDRLQLLAPFDKWDGNDLTEMTILI 642
+V + PKSDRL+ L PF+ + G ++ + + +
Sbjct: 560 TEVTIDPKSDRLEALEPFEPYQGGEMENLKVAV 592
>SPAC343.16 |lys2||homoaconitate hydratase Lys2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 721
Score = 64.9 bits (151), Expect = 9e-12
Identities = 43/129 (33%), Positives = 64/129 (49%)
Frame = +1
Query: 13 IRVGLIGSCTNSSYEDMGRCASIVKEALNHGLKSKIPFNVTPGSEQIRATIERDGIAQTL 192
I+ + SCTN D+ A VK + + F V S ++ A +++G QTL
Sbjct: 369 IKKAYLVSCTNGRLSDIHDAAETVK---GKKVADGVEFYVGAASSEVEAAAQKNGDWQTL 425
Query: 193 RDFGGTVLANACGPCIGQWDRRDVKKGEKNTIVTSYNRNFTGRNDANPATHCFVTSPELV 372
D G L CGPCIG +K GE +++ NRNF GR + A ++ SP +V
Sbjct: 426 IDSGARTLPAGCGPCIGLGTGL-LKDGEVG--ISATNRNFKGRMGSREAL-AYLASPAVV 481
Query: 373 TALSIAGRL 399
A +IAG++
Sbjct: 482 AASAIAGKI 490
>SPAC9E9.03 |leu2||3-isopropylmalate dehydratase Leu2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 57.6 bits (133), Expect = 1e-09
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = +1
Query: 28 IGSCTNSSYEDMGRCASIVK-EALNHGLKSKIPFNVTPGSEQIRATIERDGIAQTLRDFG 204
IGSCTNS ED+ A++VK + +K + + PGS ++ E +G+ Q + G
Sbjct: 356 IGSCTNSRIEDLRLAAAVVKGRKVAANVKDAM---IVPGSGLVKKMAEAEGLDQIFIEAG 412
Query: 205 GTVLANACGPCIGQWDRRDVKKGEKNTIVTSYNRNFTGRNDANPATHCFVTSPELVTALS 384
C C+G D K + TS NRNF GR A TH + SP + A +
Sbjct: 413 FDWREAGCSMCLGM--NPDQLKPYERCASTS-NRNFEGRQGAKGRTH--LVSPAMAAAAA 467
Query: 385 IAGRL 399
I G L
Sbjct: 468 IKGHL 472
>SPBC428.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 602
Score = 28.7 bits (61), Expect = 0.76
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 329 ASFLPVKLRLY--DVTIVFFSPFLTSRLSHCPMQGPQAFANTVP 204
AS L V + Y + +IV S ++ LSHC + P+AFA P
Sbjct: 505 ASALDVLISFYQKNESIVEISGYVVMILSHCFLNDPKAFAQLKP 548
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 28.3 bits (60), Expect = 1.0
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 14/208 (6%)
Frame = -2
Query: 599 SKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANG--SDNLNFFPSVPV 426
S A+ S S TS+ + P++ S+ S SSS++G S +L+ SVP
Sbjct: 93 SSSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSSSVPS 152
Query: 425 SSSDNGLKSRRPAIDRAVTSSGLVTKQCVAGFASFLPVKLRLYDVTIVF--------FSP 270
SSS S + ++SS + S + + Y +V S
Sbjct: 153 SSSSYHSSSMTTS---GLSSSASIVSSTYRDGPSIITLVSTSYVSEVVTPTTTNNWNSSS 209
Query: 269 FLTSRLSHCPMQGPQAFANTVPPKSLRVWAIPSLSMVARICSEPGVTL----NGIFDFRP 102
TS S P+ + + T+P KS + + + + GV L GIF ++
Sbjct: 210 SFTSSTSSTPISSSYSSSGTLPSKSNKSSNHVGVVVGCSVAIPVGVVLILIGLGIFLWKR 269
Query: 101 WFKASLTILAQRPMSSYEEFVQEPMRPT 18
+ S I A+R M EE+ P +P+
Sbjct: 270 -HQRSKRIKAER-MQEVEEYGFNPNQPS 295
>SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 732
Score = 28.3 bits (60), Expect = 1.0
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -2
Query: 479 SSSANGSDNLNFFPSVPVSSSD-NGLKSRRPAI 384
S S +G+ NF PS PVSS D N RRP++
Sbjct: 12 SESISGNSAFNF-PSAPVSSLDTNNYGQRRPSL 43
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 27.9 bits (59), Expect = 1.3
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -2
Query: 170 LSMVARICSEPGVT-----LNGIFD-FRPWFKASLTILAQRPMSSYEEFVQEPMRPTRIS 9
L+MV R+ S P + L IFD F F L Q YEE ++E PTR S
Sbjct: 421 LNMVDRMISLPSIPDAIFLLLSIFDSFVNKFSELNDSLDQFFKKKYEEEIKETKSPTRSS 480
Query: 8 PR 3
PR
Sbjct: 481 PR 482
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.5 bits (58), Expect = 1.8
Identities = 20/76 (26%), Positives = 36/76 (47%)
Frame = -2
Query: 590 ANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLNFFPSVPVSSSDN 411
++S S S +S+ + S+ S S S SSS++ S + + SVP++SS +
Sbjct: 156 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTS 215
Query: 410 GLKSRRPAIDRAVTSS 363
S + + +SS
Sbjct: 216 SSHSSSSSSSSSSSSS 231
Score = 26.2 bits (55), Expect = 4.0
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -2
Query: 599 SKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLNFFPSVPVSS 420
S ++S S S ++T T PS+ S S S SSS++ S + + S SS
Sbjct: 134 STTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 193
Query: 419 SDNGLKS 399
S + S
Sbjct: 194 SSSSSSS 200
Score = 25.8 bits (54), Expect = 5.3
Identities = 25/93 (26%), Positives = 39/93 (41%)
Frame = -2
Query: 641 IRIVISVRSFPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANG 462
++ +S S S S ++S S T+T T S+ S S S SSS++
Sbjct: 123 LQTTVSSSSVSSTTSSSSSSSPSSS--STTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSS 180
Query: 461 SDNLNFFPSVPVSSSDNGLKSRRPAIDRAVTSS 363
S + + S SSS + S + +TSS
Sbjct: 181 SSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSS 213
Score = 25.4 bits (53), Expect = 7.1
Identities = 28/105 (26%), Positives = 43/105 (40%)
Frame = -2
Query: 626 SVRSFPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLN 447
S S S S ++S S S +S+ + S+ S S S SSS + + +
Sbjct: 156 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTS 215
Query: 446 FFPSVPVSSSDNGLKSRRPAIDRAVTSSGLVTKQCVAGFASFLPV 312
S SSS + S RP+ +SS +T + F S + V
Sbjct: 216 SSHSSSSSSSSSSSSSSRPS-----SSSSFITTMSSSTFISTVTV 255
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 445 KFKLSDPFADELPSKGFDPGQDTYEHPPADGSKVQVDVSPKSDR 576
K++ +D F PS+ P D+Y P G K+ +S KS +
Sbjct: 118 KYESTDSFPSSQPSRANSPQSDSYSSPYEKG-KLFPKISLKSSK 160
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 4.0
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +1
Query: 382 SIAGRLDFNPLSDELTGTDGKKFKLSDPFADELPSKGFDPGQDTYE 519
S +G D + S+ + ++ +K + ++P ++E P+K P QD+ E
Sbjct: 216 SESGDSDSSSDSESESSSEDEKKRKAEPASEERPAKITKPSQDSNE 261
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 5.3
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Frame = -2
Query: 632 VISVRSFPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDN 453
+ S S S S +S S+S S+ S+ S S P S F ++S++ S +
Sbjct: 307 ISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSS 366
Query: 452 LNFFPSVPVSSS-------DNGLKSRRPAIDRAVTSSGLVTKQCVAGFASFLPVKLRLY 297
+F +V SSS + S RPA + +SS K + +S PV Y
Sbjct: 367 -SFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSSSAPVSSAFY 424
>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 25.8 bits (54), Expect = 5.3
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 288 YSVLLAFLNVAPVPLPDAGAASVRQH 211
Y+ L++ NV + LPD+ AA++R H
Sbjct: 105 YADLISSDNVHEIFLPDSNAANIRYH 130
>SPCC338.11c |rrg1|uvi22|methyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 303
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 438 WEEIQVIRSVRGRTALERFRPRSGYVRTPPRRRQQGTSGRVTEIGQAATV 587
W ++ R T ER RSG + P R+R+ S V+ + + T+
Sbjct: 58 WITVEEERDYLVSTICERIAERSGRLAAPTRKREFSLSNGVSVVLREPTM 107
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 500 GSKPFEGSSSANGS-DNLNFFPSVPVSSSDNGLKSRRP 390
G+ F+ S G+ D + F PS+P SS G R P
Sbjct: 407 GAAYFDPSKMNQGTGDGVPFSPSMPSGSSRGGYHGRNP 444
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 258 APVPLPDAGAASVRQHSTAEISKGLGDSVPLDGCADLLRAR 136
AP P P A AS+ + + L S+ G DLL++R
Sbjct: 479 APAPAPAAPVASIAELPQQDGRANLMASIRASGGMDLLKSR 519
>SPBC354.02c |sec61||translocon alpha subunit
Sec61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 479
Score = 25.4 bits (53), Expect = 7.1
Identities = 20/82 (24%), Positives = 31/82 (37%)
Frame = -2
Query: 356 VTKQCVAGFASFLPVKLRLYDVTIVFFSPFLTSRLSHCPMQGPQAFANTVPPKSLRVWAI 177
+ Q G+ S PVKL T + LTS L F++ + L VW
Sbjct: 276 IRSQKFRGYRSTFPVKLLYTSNTPIMLQSALTSNLFFASRLLFNRFSSNFLVRFLGVWEQ 335
Query: 176 PSLSMVARICSEPGVTLNGIFD 111
+ S ++ S P + + D
Sbjct: 336 TATSGLSYYLSPPASFQDALID 357
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 25.0 bits (52), Expect = 9.3
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 416 RMN*PVLMGRNSSYQIRSRTN---CPRKVSTPVRIRTNTPPQT 535
R++ P L N+S S T P TPVR +N PP T
Sbjct: 63 RLSKPSLSSINNSNNSSSNTGGNVLPNPALTPVRNMSNKPPLT 105
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 114 RLQTMVQSLFNNTGAAT 64
RL+TM S+FNN+G T
Sbjct: 910 RLRTMTLSVFNNSGTLT 926
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 424 LTGTDGKKFKLSDPFADELPSKGFDPGQDTYEH 522
L+ + ++FK S+ F D + G+ P T+ H
Sbjct: 861 LSSSFARQFKSSNLFCDNMKMLGYIPRASTFAH 893
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.136 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,726,782
Number of Sequences: 5004
Number of extensions: 58491
Number of successful extensions: 219
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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