Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_D11
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-9|AAN63393.1| 683|Caenorhabditis elegans Aconitase prote... 334 2e-92
L25599-8|AAL65788.1| 665|Caenorhabditis elegans Aconitase prote... 334 2e-92
L25599-7|AAA28050.2| 777|Caenorhabditis elegans Aconitase prote... 334 2e-92
Z66567-1|CAA91491.1| 887|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 31 0.70
AL032657-2|CAA21738.1| 368|Caenorhabditis elegans Hypothetical ... 30 1.6
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 30 1.6
Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical pr... 29 2.1
U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor... 29 2.1
U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein. 29 2.1
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 29 2.8
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 29 2.8
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 3.7
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 3.7
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF038623-3|AAB94153.2| 96|Caenorhabditis elegans Hypothetical ... 28 4.9
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 27 8.6
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 27 8.6
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 27 8.6
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 27 8.6
AC199241-2|ABO33280.1| 221|Caenorhabditis elegans Hypothetical ... 27 8.6
>L25599-9|AAN63393.1| 683|Caenorhabditis elegans Aconitase protein
2, isoform c protein.
Length = 683
Score = 334 bits (822), Expect = 2e-92
Identities = 153/211 (72%), Positives = 177/211 (83%)
Frame = +1
Query: 10 DIRVGLIGSCTNSSYEDMGRCASIVKEALNHGLKSKIPFNVTPGSEQIRATIERDGIAQT 189
D++V LIGSCTNSSYEDM R ASI K+AL+ GLK+K F +TPGSEQ+RATIERDG+++
Sbjct: 279 DVKVSLIGSCTNSSYEDMTRAASIAKQALDKGLKAKTIFTITPGSEQVRATIERDGLSKI 338
Query: 190 LRDFGGTVLANACGPCIGQWDRRDVKKGEKNTIVTSYNRNFTGRNDANPATHCFVTSPEL 369
DFGG VLANACGPCIGQWDR+DVKKGEKNTIVTSYNRNFTGRNDANPATH FVTSP++
Sbjct: 339 FADFGGMVLANACGPCIGQWDRQDVKKGEKNTIVTSYNRNFTGRNDANPATHGFVTSPDI 398
Query: 370 VTALSIAGRLDFNPLSDELTGTDGKKFKLSDPFADELPSKGFDPGQDTYEHPPADGSKVQ 549
TA++I+GRLDFNPL+DELT DG KFKL P +LP KG+DPG+DT++ P G Q
Sbjct: 399 TTAMAISGRLDFNPLTDELTAADGSKFKLQAPTGLDLPPKGYDPGEDTFQAPSGSG---Q 455
Query: 550 VDVSPKSDRLQLLAPFDKWDGNDLTEMTILI 642
VDVSP SDRLQLL+PFDKWDG DL +M ILI
Sbjct: 456 VDVSPSSDRLQLLSPFDKWDGKDLEDMKILI 486
>L25599-8|AAL65788.1| 665|Caenorhabditis elegans Aconitase protein
2, isoform b protein.
Length = 665
Score = 334 bits (822), Expect = 2e-92
Identities = 153/211 (72%), Positives = 177/211 (83%)
Frame = +1
Query: 10 DIRVGLIGSCTNSSYEDMGRCASIVKEALNHGLKSKIPFNVTPGSEQIRATIERDGIAQT 189
D++V LIGSCTNSSYEDM R ASI K+AL+ GLK+K F +TPGSEQ+RATIERDG+++
Sbjct: 261 DVKVSLIGSCTNSSYEDMTRAASIAKQALDKGLKAKTIFTITPGSEQVRATIERDGLSKI 320
Query: 190 LRDFGGTVLANACGPCIGQWDRRDVKKGEKNTIVTSYNRNFTGRNDANPATHCFVTSPEL 369
DFGG VLANACGPCIGQWDR+DVKKGEKNTIVTSYNRNFTGRNDANPATH FVTSP++
Sbjct: 321 FADFGGMVLANACGPCIGQWDRQDVKKGEKNTIVTSYNRNFTGRNDANPATHGFVTSPDI 380
Query: 370 VTALSIAGRLDFNPLSDELTGTDGKKFKLSDPFADELPSKGFDPGQDTYEHPPADGSKVQ 549
TA++I+GRLDFNPL+DELT DG KFKL P +LP KG+DPG+DT++ P G Q
Sbjct: 381 TTAMAISGRLDFNPLTDELTAADGSKFKLQAPTGLDLPPKGYDPGEDTFQAPSGSG---Q 437
Query: 550 VDVSPKSDRLQLLAPFDKWDGNDLTEMTILI 642
VDVSP SDRLQLL+PFDKWDG DL +M ILI
Sbjct: 438 VDVSPSSDRLQLLSPFDKWDGKDLEDMKILI 468
>L25599-7|AAA28050.2| 777|Caenorhabditis elegans Aconitase protein
2, isoform a protein.
Length = 777
Score = 334 bits (822), Expect = 2e-92
Identities = 153/211 (72%), Positives = 177/211 (83%)
Frame = +1
Query: 10 DIRVGLIGSCTNSSYEDMGRCASIVKEALNHGLKSKIPFNVTPGSEQIRATIERDGIAQT 189
D++V LIGSCTNSSYEDM R ASI K+AL+ GLK+K F +TPGSEQ+RATIERDG+++
Sbjct: 373 DVKVSLIGSCTNSSYEDMTRAASIAKQALDKGLKAKTIFTITPGSEQVRATIERDGLSKI 432
Query: 190 LRDFGGTVLANACGPCIGQWDRRDVKKGEKNTIVTSYNRNFTGRNDANPATHCFVTSPEL 369
DFGG VLANACGPCIGQWDR+DVKKGEKNTIVTSYNRNFTGRNDANPATH FVTSP++
Sbjct: 433 FADFGGMVLANACGPCIGQWDRQDVKKGEKNTIVTSYNRNFTGRNDANPATHGFVTSPDI 492
Query: 370 VTALSIAGRLDFNPLSDELTGTDGKKFKLSDPFADELPSKGFDPGQDTYEHPPADGSKVQ 549
TA++I+GRLDFNPL+DELT DG KFKL P +LP KG+DPG+DT++ P G Q
Sbjct: 493 TTAMAISGRLDFNPLTDELTAADGSKFKLQAPTGLDLPPKGYDPGEDTFQAPSGSG---Q 549
Query: 550 VDVSPKSDRLQLLAPFDKWDGNDLTEMTILI 642
VDVSP SDRLQLL+PFDKWDG DL +M ILI
Sbjct: 550 VDVSPSSDRLQLLSPFDKWDGKDLEDMKILI 580
>Z66567-1|CAA91491.1| 887|Caenorhabditis elegans Hypothetical
protein ZK455.1 protein.
Length = 887
Score = 59.7 bits (138), Expect = 2e-09
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Frame = +1
Query: 7 GDIRVGLIGSCTNSSYEDMGRCASIV-KEALNHGLKSK--IPFNVTPGSEQIRATIERDG 177
G + + I SCTN+S + A +V K+A+ GL + + +++PGS + +E G
Sbjct: 426 GSVVIAAITSCTNTSNPSVMLAAGLVAKKAVELGLNVQPYVKTSLSPGSGVVTKYLEASG 485
Query: 178 IAQTLRDFGGTVLANACGPCIGQ---WDRRDVKKGEKNTIVT----SYNRNFTGRNDANP 336
+ L G + C CIG D K E+N +V S NRNF GR +
Sbjct: 486 LLPYLEKIGFNIAGYGCMTCIGNSGPLDEPVTKAIEENNLVVAGVLSGNRNFEGRIHPHV 545
Query: 337 ATHCFVTSPELVTALSIAGRLDFNPLSDELTGTDGKKFKLSD 462
+ ++ SP L SI G ++ + DGK+ +L+D
Sbjct: 546 RAN-YLASPPLAVLYSIIGNVNVDINGVLAVTPDGKEIRLAD 586
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
protein C11E4.6 protein.
Length = 1170
Score = 31.1 bits (67), Expect = 0.70
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -2
Query: 266 LTSRLSHCPMQGPQAFANTVPPKSLRVWAIPSLSMVARICSEPGVTLNGIFDFRPWFKAS 87
LTS H Q ++T+P + V P+ +A + N F W K+
Sbjct: 418 LTSPSYHSKHYSCQRSSDTLPTRLKNVRTRPTEKQIASVLPGDNCAYNSPSKFNEWQKSQ 477
Query: 86 LTILAQRPMSSYE 48
LTI + RP + Y+
Sbjct: 478 LTI-SNRPPAPYD 489
>AL032657-2|CAA21738.1| 368|Caenorhabditis elegans Hypothetical
protein Y47H9C.2 protein.
Length = 368
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 446 NSSYQIRSRTNCPRKVSTPVRIRTNTPPQTAARYKWTCH--RNRTGC 580
+S+YQ+ + PR +TP PP R KW H RNR GC
Sbjct: 13 SSAYQLEEHISAPR--ATP-----ELPPSDPKRRKWQSHPGRNRFGC 52
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 438 WEEIQVIRSVRGRTALERFRPRSGYVRTPPRRRQQGTSGRVTE 566
WE IRS R R+ L R R+PPRRR++ S R E
Sbjct: 557 WENTSPIRSPR-RSPLRRDNRDRSRSRSPPRRRRRSRSPRRRE 598
>Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical
protein E03G2.3 protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/73 (30%), Positives = 29/73 (39%)
Frame = -2
Query: 614 FPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLNFFPS 435
FP +G NS GDT + G PGSK +G G++ L P
Sbjct: 116 FPGQKGEGGNSGIPGLKGDTGIPGKVGEPGSTGQ---PGSKGEKGMEGLPGTNGLPGAPG 172
Query: 434 VPVSSSDNGLKSR 396
P S ++GL R
Sbjct: 173 WPGSKGEDGLPGR 185
>U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor
protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/73 (30%), Positives = 29/73 (39%)
Frame = -2
Query: 614 FPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLNFFPS 435
FP +G NS GDT + G PGSK +G G++ L P
Sbjct: 116 FPGQKGEGGNSGIPGLKGDTGIPGKVGEPGSTGQ---PGSKGEKGMEGLPGTNGLPGAPG 172
Query: 434 VPVSSSDNGLKSR 396
P S ++GL R
Sbjct: 173 WPGSKGEDGLPGR 185
>U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein.
Length = 327
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/73 (30%), Positives = 29/73 (39%)
Frame = -2
Query: 614 FPSHLSKGANSCSLSDFGDTSTCTLLPSAGGCSYVS*PGSKPFEGSSSANGSDNLNFFPS 435
FP +G NS GDT + G PGSK +G G++ L P
Sbjct: 116 FPGQKGEGGNSGIPGLKGDTGIPGKVGEPGSTGQ---PGSKGEKGMEGLPGTNGLPGAPG 172
Query: 434 VPVSSSDNGLKSR 396
P S ++GL R
Sbjct: 173 WPGSKGEDGLPGR 185
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 583 VAACPISVTRPLVPCCRLRGGVRTYPDRGRNLSRAVR 473
V+ CPI + + L P L GGV T P + L + ++
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQ 234
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -2
Query: 533 SAGGCSYVS*PGSKPFEGSSSANGSDNLNFFPSVPVSSSDNG 408
SAG PGS+ +GS+ NG D FP P ++ DNG
Sbjct: 246 SAGTPGSPGNPGSQGPQGSAGDNGGDG---FPGQPGANGDNG 284
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -2
Query: 527 GGCSYVS*PGSKPFEGSSSANGSDNLNFFPSVPVSSSDNGL 405
G Y PG + G S G D L FP + DNGL
Sbjct: 674 GDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRGEHGDNGL 714
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -2
Query: 527 GGCSYVS*PGSKPFEGSSSANGSDNLNFFPSVPVSSSDNGL 405
G Y PG + G S G D L FP + DNGL
Sbjct: 931 GDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRGEHGDNGL 971
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -2
Query: 527 GGCSYVS*PGSKPFEGSSSANGSDNLNFFPSVPVSSSDNGL 405
G Y PG + G S G D L FP + DNGL
Sbjct: 930 GDQGYPGSPGQDGYPGPSGIPGEDGLVGFPGLRGEHGDNGL 970
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -1
Query: 399 QTTCNR-QGGDELRTCDEAVCSGVRIVPPSEV 307
Q CN GG + TC EA C + VP E+
Sbjct: 628 QMFCNECMGGGQCETCQEASCYSYKDVPEDEL 659
>AF038623-3|AAB94153.2| 96|Caenorhabditis elegans Hypothetical
protein T08B6.1 protein.
Length = 96
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 235 RGRKRSPTQYRRNL*GFGRFRPSRWLRGSAPSPGSR*TV 119
R RK + T R N GFG+ SR + P PG R T+
Sbjct: 37 RNRKVTVTTKRTNKPGFGKTTASRSQCHAKPRPGQRVTI 75
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 532 DGSKVQVDVSPKSDRLQLLAPFDKWDGND 618
DGSK+ + +PK+D L+L +W D
Sbjct: 179 DGSKLDLSATPKTDNLELYIRNTEWGLTD 207
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 532 DGSKVQVDVSPKSDRLQLLAPFDKWDGND 618
DGSK+ + +PK+D L+L +W D
Sbjct: 179 DGSKLDLSATPKTDNLELYIRNTEWGLTD 207
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 446 NSSYQIRSRTNCPRKVSTPVRIRTNTPPQTAAR 544
+SS S+ P V TP ++TPPQT+ R
Sbjct: 569 SSSSSTSSKYFSPDAVETPTNSGSSTPPQTSVR 601
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 446 NSSYQIRSRTNCPRKVSTPVRIRTNTPPQTAAR 544
+SS S+ P V TP ++TPPQT+ R
Sbjct: 471 SSSSSTSSKYFSPDAVETPTNSGSSTPPQTSVR 503
>AC199241-2|ABO33280.1| 221|Caenorhabditis elegans Hypothetical
protein 2RSSE.2 protein.
Length = 221
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 264 NVAPVPLPDAGAASVRQHSTAEISKGLGDSVP 169
N P PLP A ++ S + IS DSVP
Sbjct: 119 NPKPTPLPKPARAPLQTSSKSNISNASDDSVP 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.136 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,599,784
Number of Sequences: 27780
Number of extensions: 351183
Number of successful extensions: 1254
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1248
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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