Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_D06
(341 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 153 3e-38
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 153 3e-38
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 151 1e-37
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 151 1e-37
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 151 1e-37
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 151 1e-37
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 151 1e-37
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 151 1e-37
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 151 1e-37
12_02_1282 + 27528159-27529148,27529549-27529614 150 3e-37
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 63 5e-11
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 52 1e-07
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 48 3e-06
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 44 4e-05
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 42 2e-04
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 41 2e-04
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 29 1.3
06_03_0013 - 15393830-15394060,15394238-15394672 28 1.7
12_01_0843 + 7891622-7892524 27 2.9
02_05_0477 - 29339649-29340253,29340880-29341492 27 2.9
12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702 27 3.9
04_04_0692 - 27307349-27307728,27308381-27308546 27 5.1
09_04_0237 - 15936630-15937250,15937457-15937534,15938874-159389... 26 6.7
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 26 6.7
02_02_0088 - 6655493-6655601,6656057-6656259,6656382-6656594,665... 26 6.7
10_02_0126 - 5543658-5543670,5543748-5543840,5544344-5544529,554... 26 8.9
08_02_1040 - 23873354-23874509,23875645-23875796 26 8.9
04_04_1358 + 32869222-32869306,32869947-32870008,32870301-328703... 26 8.9
03_06_0549 - 34664552-34664901,34665013-34665109 26 8.9
03_01_0470 + 3619417-3619572,3619681-3619759,3620017-3620258,362... 26 8.9
01_06_0624 - 30683249-30684631 26 8.9
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 153 bits (372), Expect = 3e-38
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
M DE++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWD 340
+KRGILTLKYPIEHGIV NWD
Sbjct: 61 AKRGILTLKYPIEHGIVNNWD 81
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 153 bits (371), Expect = 3e-38
Identities = 68/81 (83%), Positives = 74/81 (91%)
Frame = +2
Query: 98 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 277
M +E++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 278 SKRGILTLKYPIEHGIVTNWD 340
SKRGILTLKYPIEHGIV NWD
Sbjct: 61 SKRGILTLKYPIEHGIVNNWD 81
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 151 bits (367), Expect = 1e-37
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWD 340
GILTLKYPIEHGIV+NWD
Sbjct: 65 GILTLKYPIEHGIVSNWD 82
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 151 bits (367), Expect = 1e-37
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWD 340
GILTLKYPIEHGIV+NWD
Sbjct: 65 GILTLKYPIEHGIVSNWD 82
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 151 bits (367), Expect = 1e-37
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWD 340
GILTLKYPIEHGIV+NWD
Sbjct: 65 GILTLKYPIEHGIVSNWD 82
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 151 bits (367), Expect = 1e-37
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWD 340
GILTLKYPIEHGIV+NWD
Sbjct: 65 GILTLKYPIEHGIVSNWD 82
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 151 bits (367), Expect = 1e-37
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWD 340
GILTLKYPIEHGIV+NWD
Sbjct: 65 GILTLKYPIEHGIVSNWD 82
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 151 bits (367), Expect = 1e-37
Identities = 68/78 (87%), Positives = 73/78 (93%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWD 340
GILTLKYPIEHGIV+NWD
Sbjct: 65 GILTLKYPIEHGIVSNWD 82
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 151 bits (366), Expect = 1e-37
Identities = 68/78 (87%), Positives = 72/78 (92%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWD 340
GILTLKYPIEHGIV NWD
Sbjct: 65 GILTLKYPIEHGIVNNWD 82
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 150 bits (363), Expect = 3e-37
Identities = 67/78 (85%), Positives = 72/78 (92%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 286
+++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 287 GILTLKYPIEHGIVTNWD 340
GILTLKYPIEHGIV NWD
Sbjct: 65 GILTLKYPIEHGIVNNWD 82
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 63.3 bits (147), Expect = 5e-11
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 295
+V DNG+G K GFAG++ P +VFP +VGRP R++ + D VG R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQL 66
Query: 296 TLKYPIEHGIVTNWD 340
+ YP+ +GIV +WD
Sbjct: 67 DVSYPVTNGIVQSWD 81
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 52.0 bits (119), Expect = 1e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 202
+EV+A+V+D GS CKAG+AGDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 257 YVGDEAQSKRGILTLKYPIEHGIVTNWD 340
YVG E + +R + + P++ G VT+WD
Sbjct: 120 YVGQELEFRRDHMEVISPMKDGTVTDWD 147
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 47.6 bits (108), Expect = 3e-06
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 18/92 (19%)
Frame = +2
Query: 119 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH---QGVMVG------------MGQKD 253
A+V+DNG+G K GF+G+ P P++V Q M M D
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADLD 67
Query: 254 SYVGDEAQS---KRGILTLKYPIEHGIVTNWD 340
++GDEA S G+ T K+PI HG V +WD
Sbjct: 68 FFIGDEALSLFKSSGLYTRKHPINHGQVDDWD 99
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 43.6 bits (98), Expect = 4e-05
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR---GI 292
+V+DNG G+ KAGF GD P AV P+ + +P G K V D+ Q++
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKP--------PGSKKWLVADQLQAQDVDVTG 59
Query: 293 LTLKYPIEHGIVTN 334
+TL+ PI+ G + N
Sbjct: 60 MTLRRPIDRGYLIN 73
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 41.5 bits (93), Expect = 2e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +2
Query: 122 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 268
+V+DNG+ + G+AG+ PR F +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHR----SSGETVTVVGD 66
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 41.1 bits (92), Expect = 2e-04
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 19/93 (20%)
Frame = +2
Query: 119 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV-------GRPR---HQGVMVG------MGQK 250
A+V+DNG+G K GFAG+ P + P++V G+ R +G + M
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL 67
Query: 251 DSYVGDEAQSK---RGILTLKYPIEHGIVTNWD 340
D ++G++A ++ L YPI +G V NWD
Sbjct: 68 DFFIGEDALARSRSSNTYNLSYPIHNGQVENWD 100
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 28.7 bits (61), Expect = 1.3
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 119 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 295
A+VVD GS + KAG A D +P V PS + + +D +GD A + +
Sbjct: 3 AVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV- 51
Query: 296 TLKYPIEHGIVTNWD 340
P+ G V +WD
Sbjct: 52 ---QPVVRGFVKDWD 63
>06_03_0013 - 15393830-15394060,15394238-15394672
Length = 221
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 207 GDLVTRASWSAWVRRTPT*VMRHRAR 284
G + R +W+AW RRTP V H R
Sbjct: 163 GTVAKRRAWAAWTRRTPN-VWNHDYR 187
>12_01_0843 + 7891622-7892524
Length = 300
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAV 190
E+V ++ D GSG +AG GD AP V
Sbjct: 170 EDVTSVWRDGGSGAARAGDDGDGAPAFV 197
>02_05_0477 - 29339649-29340253,29340880-29341492
Length = 405
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 107 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 205
+ VAALV N G+ + G+DA A PS++
Sbjct: 44 DAVAALVASNEDGVVEGEGEGEDAAEAPAPSVL 76
>12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702
Length = 501
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 128 VDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 259
++N S K GF + V +++G P H G + G+ K S+
Sbjct: 322 IENLSSSQKKGFFKPKREKDVLSTVLGTPEHGGRVRGVSSKMSW 365
>04_04_0692 - 27307349-27307728,27308381-27308546
Length = 181
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 204 TIEGNTARGASSPAKPALHIPDPLSTTNAATSSS 103
T+ G+ A G + AKP+ DP +TT TSS+
Sbjct: 123 TLSGSAA-GGTRLAKPSSSDADPTTTTTTRTSSA 155
>09_04_0237 -
15936630-15937250,15937457-15937534,15938874-15938973,
15940414-15942278
Length = 887
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/53 (26%), Positives = 19/53 (35%)
Frame = +2
Query: 179 PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNW 337
P AV + RH+GV +A S + + P EH T W
Sbjct: 723 PIAVSATNTASCRHEGVATATAHTHPRTSTQAVSPLPSVAIAMPCEHSSTTRW 775
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 119 ALVVDNGSGMCKAGFAGDDAP 181
+++VD GSG CK G++ AP
Sbjct: 141 SIIVDGGSGYCKYGWSKYAAP 161
>02_02_0088 -
6655493-6655601,6656057-6656259,6656382-6656594,
6656683-6656792,6656878-6656981,6657076-6657245,
6657337-6657501,6657584-6657702,6657853-6657940,
6658035-6658140,6658235-6658323,6658461-6658604,
6658715-6658807,6658906-6658972,6659116-6659228,
6659306-6659401,6659524-6659724
Length = 729
Score = 26.2 bits (55), Expect = 6.7
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +3
Query: 57 YLFNRTI*LKTNSQCATRKLPRWS*TMGPECAKPVSRETTLPAPYFPRSWGDLVTRASWS 236
Y N + ++ N Q LP WS ++ P+C V T+ P +V R +W
Sbjct: 390 YHMNTAVKVRFNGQ--QYNLPAWSISILPDCKTAVFNTATVKEPTLMPKMNPVV-RFAWQ 446
Query: 237 AWVRRT 254
++ T
Sbjct: 447 SYSEDT 452
>10_02_0126 -
5543658-5543670,5543748-5543840,5544344-5544529,
5544613-5545310,5545323-5546237,5546842-5547081
Length = 714
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 128 VDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 259
++N S K GF + V + +G P H G + G+ K S+
Sbjct: 171 IENLSSSQKKGFFKPKREKDVLSTALGTPEHGGRVQGVSSKMSW 214
>08_02_1040 - 23873354-23874509,23875645-23875796
Length = 435
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 234 TMTPW*RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSSSHI 97
T W R + GN++ A++ A A P P S ++ TSS+ +
Sbjct: 320 TALRWVRSSTALRGNSSDAAAAAAAAA--APSPSSASSTPTSSTFL 363
>04_04_1358 + 32869222-32869306,32869947-32870008,32870301-32870393,
32870640-32870761,32873139-32873167,32873586-32873891,
32873977-32874035,32874148-32874279,32874414-32874455,
32874560-32875093,32875189-32875379,32875538-32876027,
32876273-32876335,32876704-32876805,32876895-32877215,
32877294-32877386,32877484-32877585,32877718-32877822,
32877933-32878066,32878429-32878612,32879226-32879357,
32879447-32879559,32879628-32879709,32880328-32881992
Length = 1746
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 250 LLTHADHDALVTRSPHDRGKYGAGSVVSRETGFAHS 143
+L HA D V R P Y G R+ G+AHS
Sbjct: 1512 ILPHAI-DTRVPRGPRSTLYYRTGHTFQRKQGYAHS 1546
>03_06_0549 - 34664552-34664901,34665013-34665109
Length = 148
Score = 25.8 bits (54), Expect = 8.9
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = -2
Query: 340 VPVGDDAVFDGVFECEDTPLALCLITYVGVLLTHADHDALVTRSPHDRGKYGA 182
VPVG A G+F+C D LC +T +T +V R G GA
Sbjct: 12 VPVGSAAWSSGLFDCFD-DCGLCCMTCWCPCITFGRVAEIVDRGSTSCGASGA 63
>03_01_0470 +
3619417-3619572,3619681-3619759,3620017-3620258,
3620804-3621148,3623592-3624116
Length = 448
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 216 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSSSH 100
R P + + ARG S P + AL DP++ +++ H
Sbjct: 252 RRTPWVGAHAARGGSRPLRRALQGLDPVTIAAIFSTAEH 290
>01_06_0624 - 30683249-30684631
Length = 460
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 168 ETTLPAPYFPRSWGDLVTRASWSAWVRRTPT*VMRHRARG 287
E+ LP + R+WG + SW+ V V+RH A G
Sbjct: 309 ESLLPEGFLDRTWGRGLVLPSWAPQVE-----VLRHPATG 343
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,669,650
Number of Sequences: 37544
Number of extensions: 207079
Number of successful extensions: 664
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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