Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_D05
(332 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 24 0.42
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 0.56
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 3.0
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 3.0
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 3.0
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 3.0
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 3.9
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 3.9
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 3.9
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 5.2
AB264332-1|BAF44087.1| 58|Apis mellifera ecdysone-induced prot... 20 9.1
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 20 9.1
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 24.2 bits (50), Expect = 0.42
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 197 HRPERSVHWPRTTEMTVDLKIKMTADQEQKETIADQEE 310
H+P R P TT+ + L+ K ++Q TIA++ E
Sbjct: 6 HKPNRKPRTPFTTQQLLSLEKKFR--EKQYLTIAERAE 41
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.8 bits (49), Expect = 0.56
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +3
Query: 21 RSRCQ--RMPKNRRQHQPRAGA--GRSPRRERQRGIAGEPKGNQTPKEIRAVAS 170
R+RCQ R+ K R GR P+RE+ R +A + + + + +AVA+
Sbjct: 117 RNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARILAAMQQSSHSRSQEKAVAA 170
Score = 21.0 bits (42), Expect = 3.9
Identities = 7/33 (21%), Positives = 16/33 (48%)
Frame = +2
Query: 212 SVHWPRTTEMTVDLKIKMTADQEQKETIADQEE 310
+ WP T+ +T + Q+Q++ Q++
Sbjct: 778 TTRWPATSVITTTTGARQQQQQQQQQQQQQQQQ 810
Score = 19.8 bits (39), Expect = 9.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 73 LAPGGAPGEKDKEESLE 123
L+P P + DKE+S +
Sbjct: 23 LSPSSEPLDNDKEQSAQ 39
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 3.0
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +2
Query: 83 AEPPA--RKTKRNRWRTKGESDPERNQSR 163
A PP+ ++T+ + +TK P NQS+
Sbjct: 528 ALPPSSMKETEEEKKKTKQSLSPSENQSK 556
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 3.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 55 GSISQELAPGGAPGEKDKEESLENQ 129
G+ +E PG PG++ K+ L+NQ
Sbjct: 20 GTPKEEPGPG-LPGQEVKQSFLKNQ 43
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 3.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 55 GSISQELAPGGAPGEKDKEESLENQ 129
G+ +E PG PG++ K+ L+NQ
Sbjct: 20 GTPKEEPGPG-LPGQEVKQSFLKNQ 43
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 3.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 55 GSISQELAPGGAPGEKDKEESLENQ 129
G+ +E PG PG++ K+ L+NQ
Sbjct: 20 GTPKEEPGPG-LPGQEVKQSFLKNQ 43
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.0 bits (42), Expect = 3.9
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = +2
Query: 101 KTKRNRWRTKGESDPERNQSRGVYRAKEENATHRPERSVH 220
K N+ ++D +RN +R +N +R + VH
Sbjct: 499 KQNDNKQNGNRQNDNKRNGNRQNDNQNNQNDNNRNDNQVH 538
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.0 bits (42), Expect = 3.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 52 EGSISQELAPGGAPGEKDKEESLENQRGIRPRKKSEPW 165
EG+I+ EL PG D SL R SE W
Sbjct: 248 EGAITVELQSENIPGFDDYMASLTPDTNRRNPWFSEYW 285
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.0 bits (42), Expect = 3.9
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 52 EGSISQELAPGGAPGEKDKEESLENQRGIRPRKKSEPW 165
EG+I+ EL PG D SL R SE W
Sbjct: 338 EGAITVELQSENIPGFDDYMASLTPDTNRRNPWFSEYW 375
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 20.6 bits (41), Expect = 5.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 208 LWPVRRVFFLRTIDATAL 155
++PVR +FFL + L
Sbjct: 1 MFPVRSIFFLSLVSVVLL 18
>AB264332-1|BAF44087.1| 58|Apis mellifera ecdysone-induced protein
75 protein.
Length = 58
Score = 19.8 bits (39), Expect = 9.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +1
Query: 73 LAPGGAPGEKDKEESLE 123
L+P P + DKE+S +
Sbjct: 23 LSPSSEPLDNDKEQSAQ 39
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 19.8 bits (39), Expect = 9.1
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +2
Query: 122 RTKGESDPERNQSRGVYRAKEEN 190
++K E DP + G Y + +N
Sbjct: 82 KSKMEIDPATQKDAGYYECQADN 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.308 0.128 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,257
Number of Sequences: 438
Number of extensions: 1427
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7466580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.3 bits)
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