Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_C22
         (194 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholi...    19   5.4  
EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholi...    19   5.4  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    19   5.4  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    19   5.4  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    19   5.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    19   5.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    19   5.4  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    19   7.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    18   9.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    18   9.4  

>EF127803-1|ABL67940.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 4 protein.
          Length = 461

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 166 YCPPNVPDTDSRIQLTLTAEYN*HCQPKW 80
           Y PP +  +  +I +T     + HC  K+
Sbjct: 101 YVPPGIFKSTCKIDITWFPFDDQHCDMKF 129


>EF127800-1|ABL67937.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 1 protein.
          Length = 461

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 166 YCPPNVPDTDSRIQLTLTAEYN*HCQPKW 80
           Y PP +  +  +I +T     + HC  K+
Sbjct: 101 YVPPGIFKSTCKIDITWFPFDDQHCDMKF 129


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 166 YCPPNVPDTDSRIQLTLTAEYN*HCQPKW 80
           Y PP +  +  +I +T     + HC  K+
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKF 197


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 166 YCPPNVPDTDSRIQLTLTAEYN*HCQPKW 80
           Y PP +  +  +I +T     + HC  K+
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKF 197


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 83  FGLTVSVIFG 112
           FGL +S +FG
Sbjct: 183 FGLAISFVFG 192


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 166 YCPPNVPDTDSR 131
           +CPPN+  T  R
Sbjct: 311 FCPPNLRLTSER 322


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 166 YCPPNVPDTDSR 131
           +CPPN+  T  R
Sbjct: 401 FCPPNLRLTSER 412


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
          protein.
          Length = 129

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 48 VPVRFRRQ 71
          +P RFRRQ
Sbjct: 30 IPTRFRRQ 37


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 27  YHLFLLTVPVRFR 65
           YHLFL  + ++ R
Sbjct: 917 YHLFLTNLYIQMR 929


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 27  YHLFLLTVPVRFR 65
           YHLFL  + ++ R
Sbjct: 955 YHLFLTNLYIQMR 967


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,215
Number of Sequences: 438
Number of extensions: 621
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used:  2541420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)