Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_C18
(487 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042195-1|AAH42195.2| 390|Homo sapiens malonyl CoA:ACP acyltra... 69 7e-12
BC030985-1|AAH30985.1| 180|Homo sapiens malonyl CoA:ACP acyltra... 69 7e-12
AL359403-1|CAB94790.1| 180|Homo sapiens hypothetical protein pr... 69 7e-12
AL359401-1|CAB94789.1| 390|Homo sapiens hypothetical protein pr... 69 7e-12
AL022237-3|CAA18261.1| 390|Homo sapiens protein ( Human DNA seq... 69 7e-12
AB107036-1|BAC92750.1| 5061|Homo sapiens epiplakin protein. 31 2.2
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 29 8.7
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 29 8.7
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 29 8.7
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 29 8.7
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 29 8.7
>BC042195-1|AAH42195.2| 390|Homo sapiens malonyl CoA:ACP
acyltransferase (mitochondrial) protein.
Length = 390
Score = 69.3 bits (162), Expect = 7e-12
Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +1
Query: 295 PRDTTVLLFPGQGSQYVGMGRDLLRIPTVRDLYLLASDVVGWDVARVCTEGPTEELAR-- 468
P +VLLFPGQGSQ VGMGR LL P VR+LY A V+G+D+ + GP E L R
Sbjct: 59 PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118
Query: 469 RCQTAV 486
CQ A+
Sbjct: 119 HCQPAI 124
>BC030985-1|AAH30985.1| 180|Homo sapiens malonyl CoA:ACP
acyltransferase (mitochondrial) protein.
Length = 180
Score = 69.3 bits (162), Expect = 7e-12
Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +1
Query: 295 PRDTTVLLFPGQGSQYVGMGRDLLRIPTVRDLYLLASDVVGWDVARVCTEGPTEELAR-- 468
P +VLLFPGQGSQ VGMGR LL P VR+LY A V+G+D+ + GP E L R
Sbjct: 59 PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118
Query: 469 RCQTAV 486
CQ A+
Sbjct: 119 HCQPAI 124
>AL359403-1|CAB94790.1| 180|Homo sapiens hypothetical protein
protein.
Length = 180
Score = 69.3 bits (162), Expect = 7e-12
Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +1
Query: 295 PRDTTVLLFPGQGSQYVGMGRDLLRIPTVRDLYLLASDVVGWDVARVCTEGPTEELAR-- 468
P +VLLFPGQGSQ VGMGR LL P VR+LY A V+G+D+ + GP E L R
Sbjct: 59 PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118
Query: 469 RCQTAV 486
CQ A+
Sbjct: 119 HCQPAI 124
>AL359401-1|CAB94789.1| 390|Homo sapiens hypothetical protein
protein.
Length = 390
Score = 69.3 bits (162), Expect = 7e-12
Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +1
Query: 295 PRDTTVLLFPGQGSQYVGMGRDLLRIPTVRDLYLLASDVVGWDVARVCTEGPTEELAR-- 468
P +VLLFPGQGSQ VGMGR LL P VR+LY A V+G+D+ + GP E L R
Sbjct: 59 PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118
Query: 469 RCQTAV 486
CQ A+
Sbjct: 119 HCQPAI 124
>AL022237-3|CAA18261.1| 390|Homo sapiens protein ( Human DNA
sequence from clone CTB-1191B2 on chromosome
22q13.2-13.3.Contains the 3' end of a novel gene, the 5'
end of the gene for ).
Length = 390
Score = 69.3 bits (162), Expect = 7e-12
Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +1
Query: 295 PRDTTVLLFPGQGSQYVGMGRDLLRIPTVRDLYLLASDVVGWDVARVCTEGPTEELAR-- 468
P +VLLFPGQGSQ VGMGR LL P VR+LY A V+G+D+ + GP E L R
Sbjct: 59 PGQCSVLLFPGQGSQVVGMGRGLLNYPRVRELYAAARRVLGYDLLELSLHGPQETLDRTV 118
Query: 469 RCQTAV 486
CQ A+
Sbjct: 119 HCQPAI 124
>AB107036-1|BAC92750.1| 5061|Homo sapiens epiplakin protein.
Length = 5061
Score = 31.1 bits (67), Expect = 2.2
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +2
Query: 212 LSTSSCSGRLSRIRGVPTGKPLAATESSRAILQCYCSRGRARSMSVWVVICSGFL 376
L+ + R G P P A S A ++ R R R++ VW V+ SG++
Sbjct: 4067 LAQAQAQARAEAEAGSPRPDPREALRPSAATMEVKVGRLRGRAVPVWDVLASGYV 4121
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 485 TAV*QRRANSSVGPSVHTRATSHPTTSDARRYKSRTVGIRSRSR 354
T+V +RR+ S P R+ S RR +SRT R RSR
Sbjct: 1904 TSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR 1947
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 485 TAV*QRRANSSVGPSVHTRATSHPTTSDARRYKSRTVGIRSRSR 354
T+V +RR+ S P R+ S RR +SRT R RSR
Sbjct: 936 TSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR 979
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 485 TAV*QRRANSSVGPSVHTRATSHPTTSDARRYKSRTVGIRSRSR 354
T+V +RR+ S P R+ S RR +SRT R RSR
Sbjct: 1904 TSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR 1947
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 485 TAV*QRRANSSVGPSVHTRATSHPTTSDARRYKSRTVGIRSRSR 354
T+V +RR+ S P R+ S RR +SRT R RSR
Sbjct: 427 TSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR 470
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 29.1 bits (62), Expect = 8.7
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 485 TAV*QRRANSSVGPSVHTRATSHPTTSDARRYKSRTVGIRSRSR 354
T+V +RR+ S P R+ S RR +SRT R RSR
Sbjct: 1952 TSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR 1995
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,772,478
Number of Sequences: 237096
Number of extensions: 1506318
Number of successful extensions: 3809
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3809
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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