Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_C13
(569 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 265 2e-71
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 265 2e-71
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 263 5e-71
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 254 2e-68
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 252 1e-67
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 252 1e-67
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 36 0.015
Z73911-4|CAA98141.2| 625|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical p... 29 2.4
AF067211-14|AAC16992.2| 412|Caenorhabditis elegans Hypothetical... 28 4.1
Z36753-4|CAA85333.1| 163|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF045645-2|AAC02609.1| 299|Caenorhabditis elegans Hypothetical ... 28 5.4
U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical pr... 27 7.2
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 27 9.5
AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical... 27 9.5
AC006777-4|AAK72310.1| 333|Caenorhabditis elegans Hypothetical ... 27 9.5
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 27 9.5
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 265 bits (649), Expect = 2e-71
Identities = 119/186 (63%), Positives = 147/186 (79%), Gaps = 3/186 (1%)
Frame = +1
Query: 19 KHPAKNWGDVET--LGNLDPAGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSST 192
K P + G+ +T L +LDP G+F+ STR+RCGRS++GYPFNPCL+EA Y EME KV +
Sbjct: 99 KQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSLQGYPFNPCLSEANYLEMESKVKAI 158
Query: 193 LSGL-EGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNE 369
+ + EL G ++PL GM+KE Q QLI DHFLFKEGDRFLQAANACR+WP GRGI+HN
Sbjct: 159 FDNITDPELAGKYFPLDGMTKEIQDQLIKDHFLFKEGDRFLQAANACRYWPKGRGIFHNN 218
Query: 370 NKTFLVWCNEEDHLRLISMQMGGDLKEVYKRLVTAVNDIEKRIPFSHHDRLGFLTFCPTN 549
KTFL+WCNEEDHLR+ISMQ GG++ +V +RL+ V IEK+ PFS DRLG+LTFCP+N
Sbjct: 219 QKTFLIWCNEEDHLRIISMQEGGNVGQVLERLIKGVKTIEKQAPFSRDDRLGWLTFCPSN 278
Query: 550 LGTTVR 567
LGTTVR
Sbjct: 279 LGTTVR 284
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 265 bits (649), Expect = 2e-71
Identities = 119/186 (63%), Positives = 147/186 (79%), Gaps = 3/186 (1%)
Frame = +1
Query: 19 KHPAKNWGDVET--LGNLDPAGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSST 192
K P + G+ +T L +LDP G+F+ STR+RCGRS++GYPFNPCL+EA Y EME KV +
Sbjct: 136 KQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSLQGYPFNPCLSEANYLEMESKVKAI 195
Query: 193 LSGL-EGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNE 369
+ + EL G ++PL GM+KE Q QLI DHFLFKEGDRFLQAANACR+WP GRGI+HN
Sbjct: 196 FDNITDPELAGKYFPLDGMTKEIQDQLIKDHFLFKEGDRFLQAANACRYWPKGRGIFHNN 255
Query: 370 NKTFLVWCNEEDHLRLISMQMGGDLKEVYKRLVTAVNDIEKRIPFSHHDRLGFLTFCPTN 549
KTFL+WCNEEDHLR+ISMQ GG++ +V +RL+ V IEK+ PFS DRLG+LTFCP+N
Sbjct: 256 QKTFLIWCNEEDHLRIISMQEGGNVGQVLERLIKGVKTIEKQAPFSRDDRLGWLTFCPSN 315
Query: 550 LGTTVR 567
LGTTVR
Sbjct: 316 LGTTVR 321
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 263 bits (645), Expect = 5e-71
Identities = 118/188 (62%), Positives = 149/188 (79%), Gaps = 3/188 (1%)
Frame = +1
Query: 13 TDKHPAKNWGD--VETLGNLDPAGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVS 186
TD PA + G+ V L +LDP G+F+VSTR+RCGRS++GYPFNPCL+E YK ME ++
Sbjct: 97 TDTQPAMDLGEKNVGELADLDPEGKFIVSTRIRCGRSLQGYPFNPCLSETNYKMMETRMK 156
Query: 187 STLSGL-EGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYH 363
+ + + ELKGT+YPLTGM +ET+++LI DHFLFKEGDRFL+AANA R+WP GRGI+H
Sbjct: 157 EIFNSITDPELKGTYYPLTGMDEETKKKLIADHFLFKEGDRFLKAANANRYWPNGRGIFH 216
Query: 364 NENKTFLVWCNEEDHLRLISMQMGGDLKEVYKRLVTAVNDIEKRIPFSHHDRLGFLTFCP 543
NE KTFLVW NEEDHLR+ISMQ GG++ EV RL+ +N + + PF+ H RLG+LTFCP
Sbjct: 217 NEKKTFLVWVNEEDHLRIISMQNGGNVGEVLARLIKGLNLVAAKAPFARHPRLGWLTFCP 276
Query: 544 TNLGTTVR 567
TNLGTTVR
Sbjct: 277 TNLGTTVR 284
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 254 bits (623), Expect = 2e-68
Identities = 118/190 (62%), Positives = 140/190 (73%), Gaps = 3/190 (1%)
Frame = +1
Query: 7 GKTDKHPAKNWGDVET--LGNLDPAGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDK 180
G K P + G+ +T LDP G+++ STR+RCGRS+ GY FNPCLTE Y EME+K
Sbjct: 107 GPDQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLNGYQFNPCLTEDNYLEMEEK 166
Query: 181 VSSTLSGL-EGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGI 357
V S + ELKGT+YPL GMSK+TQ QLI DHFLFKEGDR LQ ANAC FWP GRGI
Sbjct: 167 VKKAFSEFSDEELKGTYYPLDGMSKDTQNQLIADHFLFKEGDRHLQYANACNFWPKGRGI 226
Query: 358 YHNENKTFLVWCNEEDHLRLISMQMGGDLKEVYKRLVTAVNDIEKRIPFSHHDRLGFLTF 537
+HN KTFL+W NEEDHLR+ISMQ G D+ V +RL+ V IEK++ FS DRLG+LTF
Sbjct: 227 FHNNKKTFLIWVNEEDHLRIISMQEGSDVGAVLERLIKGVRGIEKQVQFSRDDRLGWLTF 286
Query: 538 CPTNLGTTVR 567
CPTNLG+TVR
Sbjct: 287 CPTNLGSTVR 296
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 252 bits (617), Expect = 1e-67
Identities = 115/186 (61%), Positives = 140/186 (75%), Gaps = 3/186 (1%)
Frame = +1
Query: 19 KHPAKNWGDVET--LGNLDPAGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSST 192
K P + G+ +T LDP G+++ STR+RCGRS++GYPFNPCLT+ Y EME KV
Sbjct: 138 KQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLKGYPFNPCLTQDNYLEMEGKVKKA 197
Query: 193 LSGL-EGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNE 369
S + ELKG +YPL GM K+TQ+QLI DHFLFKEGDR LQ ANAC FWP GRGI+HN
Sbjct: 198 FSEYSDKELKGKYYPLDGMGKDTQKQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNN 257
Query: 370 NKTFLVWCNEEDHLRLISMQMGGDLKEVYKRLVTAVNDIEKRIPFSHHDRLGFLTFCPTN 549
+KTFL+W NEEDH+R+ISMQ G D+ V RL+ V IEK++PFS DRLG+LTFCPTN
Sbjct: 258 DKTFLIWVNEEDHMRIISMQEGSDVGAVLDRLIKGVRGIEKQVPFSRDDRLGWLTFCPTN 317
Query: 550 LGTTVR 567
LG+TVR
Sbjct: 318 LGSTVR 323
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 252 bits (617), Expect = 1e-67
Identities = 115/186 (61%), Positives = 140/186 (75%), Gaps = 3/186 (1%)
Frame = +1
Query: 19 KHPAKNWGDVET--LGNLDPAGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSST 192
K P + G+ +T LDP G+++ STR+RCGRS++GYPFNPCLT+ Y EME KV
Sbjct: 166 KQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLKGYPFNPCLTQDNYLEMEGKVKKA 225
Query: 193 LSGL-EGELKGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWPTGRGIYHNE 369
S + ELKG +YPL GM K+TQ+QLI DHFLFKEGDR LQ ANAC FWP GRGI+HN
Sbjct: 226 FSEYSDKELKGKYYPLDGMGKDTQKQLIADHFLFKEGDRHLQYANACNFWPKGRGIFHNN 285
Query: 370 NKTFLVWCNEEDHLRLISMQMGGDLKEVYKRLVTAVNDIEKRIPFSHHDRLGFLTFCPTN 549
+KTFL+W NEEDH+R+ISMQ G D+ V RL+ V IEK++PFS DRLG+LTFCPTN
Sbjct: 286 DKTFLIWVNEEDHMRIISMQEGSDVGAVLDRLIKGVRGIEKQVPFSRDDRLGWLTFCPTN 345
Query: 550 LGTTVR 567
LG+TVR
Sbjct: 346 LGSTVR 351
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 36.3 bits (80), Expect = 0.015
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3
Query: 429 DGRRPEGGVQEARDRRQRHREEDPVLAPRQARFPDIL 539
D R G +E RDRRQR+R E P RQARF + L
Sbjct: 391 DNERGGGEAEEDRDRRQRNRIEFPDEPMRQARFKEFL 427
>Z73911-4|CAA98141.2| 625|Caenorhabditis elegans Hypothetical
protein T12A7.1 protein.
Length = 625
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +1
Query: 85 VVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSSTLSGLEGELKGTFYPLTGMSKETQQ 264
++ST+ CG++M+ C ++K+ +D + + + L T G + TQ
Sbjct: 231 LISTQALCGKNMDRPIIIECYDHEKFKKQDDIIGTAQTTL-----NTLIEQAGGGESTQI 285
Query: 265 QLIDDHFLFKEGDRF 309
LI++ K+G ++
Sbjct: 286 PLINEKKKLKKGAKY 300
>Z69361-3|CAA93289.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 221 PLSSPSSPERVLETLSSISLYWASVRQGLKGYPSMERPQRTRVETTNSPA 72
P++ P PER +T S +G+K RP RTR+ NSP+
Sbjct: 421 PVAPPFEPERQEKTQEMRKSMSNSAEEGVK---KNRRPVRTRIRNGNSPS 467
>Z68882-20|CAA93112.1| 533|Caenorhabditis elegans Hypothetical
protein T13H10.1 protein.
Length = 533
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -1
Query: 221 PLSSPSSPERVLETLSSISLYWASVRQGLKGYPSMERPQRTRVETTNSPA 72
P++ P PER +T S +G+K RP RTR+ NSP+
Sbjct: 421 PVAPPFEPERQEKTQEMRKSMSNSAEEGVK---KNRRPVRTRIRNGNSPS 467
>AF067211-14|AAC16992.2| 412|Caenorhabditis elegans Hypothetical
protein B0205.6 protein.
Length = 412
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 378 LPRVVQRGGPPPSHFHADGRRPEGGVQEARDRRQRHREEDP 500
LP ++ G P S H+ G + E GV++AR+ + DP
Sbjct: 32 LPYMINDFGNPHSRTHSYGWKAEEGVEQAREHVANLIKADP 72
>Z36753-4|CAA85333.1| 163|Caenorhabditis elegans Hypothetical
protein T09A5.5 protein.
Length = 163
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 307 FLQAA-NACRFWPTGRGIYHNENKTFLVWCNEEDHLRLIS-MQMGGDLKEVYKR 462
FLQ + C + G + K + W ++E L +I M +GGD +E YKR
Sbjct: 56 FLQRSYTTCDPFVVGEYSWLRHRKKRVNWKSKEQVLSMIEEMSIGGDYREGYKR 109
>AF045645-2|AAC02609.1| 299|Caenorhabditis elegans Hypothetical
protein K02D7.5 protein.
Length = 299
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 497 ILFSMSLTAVTSLLYTSFRSPPICMEMRRR 408
+L +S++A+T+ + F PICM++RR+
Sbjct: 5 VLQVLSISAITTTIALFFCGIPICMQIRRQ 34
>U97007-6|AAB52296.3| 468|Caenorhabditis elegans Hypothetical
protein ZC196.4 protein.
Length = 468
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 364 NENKTFLVWCNE---EDHLRLISMQMGGDLKEVYKRLVTAVNDIEKRIPFSH 510
N+ + F W + H ++G +K+ YK+ +T +DI++ I + H
Sbjct: 253 NQKQCFEAWLSGMRLRQHFNEKEQEVGNWIKKCYKKPITRNDDIQEEIIYFH 304
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical
protein K07E3.1 protein.
Length = 1061
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +1
Query: 73 AGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEMEDKVSSTLSGLEGELKGTFYPLTGMSK 252
A E V R R+ G P + E K + D +SS + L+ L+G GM+K
Sbjct: 19 AREKVDEELYRLIRTTPGLPDQSWMVEDVEKTVRDFMSSRVDHLKSLLEGWEIMEKGMNK 78
Query: 253 ETQQQLIDD 279
E Q+ ++
Sbjct: 79 EIATQIFNE 87
>AC084159-16|AAK39357.1| 205|Caenorhabditis elegans Hypothetical
protein Y73B3A.7 protein.
Length = 205
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -1
Query: 149 VRQGLKGYPSMERPQRTRVETTNSPAGSRLP-RVSTSPQFLAGCLSV 12
VR+ + GY + + ++++TN+P SRLP Q L G L +
Sbjct: 47 VRKSIMGYRGKRKTDQ-QLKSTNNPTSSRLPLNTKNVAQALGGRLHI 92
>AC006777-4|AAK72310.1| 333|Caenorhabditis elegans Hypothetical
protein Y46H3D.7 protein.
Length = 333
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 160 YKEMEDKVSSTLSGLEGELKGTFYPLTGMSKETQQQLIDDHFL 288
++EM+D S LS + L TFY + M ++ QQ+L+ +FL
Sbjct: 122 FEEMDDVCSVDLSLVVETLVRTFYKMAPM-EDDQQRLLVKNFL 163
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +3
Query: 432 GRRP---EGGVQEARDRRQRHREEDPVLAPRQARFPDILPDQLGDDR 563
GR P + G E ++++ + E DP PR P P+Q D+
Sbjct: 271 GRAPNTLKAGDHERKEKKPKKEERDPAAPPRPRGRPPKTPEQKALDK 317
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,358,911
Number of Sequences: 27780
Number of extensions: 232163
Number of successful extensions: 946
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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