Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_C11
(528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC134417-1|AAI34418.1| 363|Homo sapiens chromosome 20 open read... 30 4.4
AL034548-3|CAB81629.2| 363|Homo sapiens chromosome 20 open read... 30 4.4
AL034548-2|CAI19175.2| 328|Homo sapiens chromosome 20 open read... 30 4.4
AK074694-1|BAC11144.1| 442|Homo sapiens protein ( Homo sapiens ... 30 5.8
AK027706-1|BAB55311.1| 442|Homo sapiens protein ( Homo sapiens ... 30 5.8
AK097394-1|BAC05033.1| 363|Homo sapiens protein ( Homo sapiens ... 29 7.6
AK091924-1|BAC03772.1| 179|Homo sapiens protein ( Homo sapiens ... 29 7.6
AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy cha... 29 7.6
>BC134417-1|AAI34418.1| 363|Homo sapiens chromosome 20 open reading
frame 96 protein.
Length = 363
Score = 30.3 bits (65), Expect = 4.4
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 213 EYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENLLKRATPYFKRIDDDFRAEW 392
EY + LM +++ + D + DLGE + E+L + K+I AE
Sbjct: 218 EYSIKSVQISTLMRQLQQVKDSQQDELDDLGEMRRKVLESLSDKIQKKKKKILSSVVAET 277
Query: 393 DKFYKEISVDKVFKEFSHTLNEVIHYLAKIIDE 491
+ Y+E + K+++ S + + +IID+
Sbjct: 278 QRPYEEALLQKMWE--SQDFLKCMQRFREIIDQ 308
>AL034548-3|CAB81629.2| 363|Homo sapiens chromosome 20 open reading
frame 96 protein.
Length = 363
Score = 30.3 bits (65), Expect = 4.4
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 213 EYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENLLKRATPYFKRIDDDFRAEW 392
EY + LM +++ + D + DLGE + E+L + K+I AE
Sbjct: 218 EYSIKSVQISTLMRQLQQVKDSQQDELDDLGEMRRKVLESLSDKIQKKKKKILSSVVAET 277
Query: 393 DKFYKEISVDKVFKEFSHTLNEVIHYLAKIIDE 491
+ Y+E + K+++ S + + +IID+
Sbjct: 278 QRPYEEALLQKMWE--SQDFLKCMQRFREIIDQ 308
>AL034548-2|CAI19175.2| 328|Homo sapiens chromosome 20 open reading
frame 96 protein.
Length = 328
Score = 30.3 bits (65), Expect = 4.4
Identities = 22/93 (23%), Positives = 42/93 (45%)
Frame = +3
Query: 213 EYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENLLKRATPYFKRIDDDFRAEW 392
EY + LM +++ + D + DLGE + E+L + K+I AE
Sbjct: 183 EYSIKSVQISTLMRQLQQVKDSQQDELDDLGEMRRKVLESLSDKIQKKKKKILSSVVAET 242
Query: 393 DKFYKEISVDKVFKEFSHTLNEVIHYLAKIIDE 491
+ Y+E + K+++ S + + +IID+
Sbjct: 243 QRPYEEALLQKMWE--SQDFLKCMQRFREIIDQ 273
>AK074694-1|BAC11144.1| 442|Homo sapiens protein ( Homo sapiens
cDNA FLJ90213 fis, clone MAMMA1002142, weakly similar to
NON-RECEPTOR TYROSINE KINASE SPORE LYSIS A (EC
2.7.1.112). ).
Length = 442
Score = 29.9 bits (64), Expect = 5.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 9 GNVVQIKTLMKDFQYFEFTTEESGCKFTVVAHLVPE 116
G V + L KD YFE + +SG + T+ LVP+
Sbjct: 66 GCYVASRPLTKDSNYFEVSIVDSGVRGTIAVGLVPQ 101
>AK027706-1|BAB55311.1| 442|Homo sapiens protein ( Homo sapiens
cDNA FLJ14800 fis, clone NT2RP4001375, weakly similar to
NON-RECEPTOR TYROSINE KINASE SPORE LYSIS A (EC
2.7.1.112). ).
Length = 442
Score = 29.9 bits (64), Expect = 5.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 9 GNVVQIKTLMKDFQYFEFTTEESGCKFTVVAHLVPE 116
G V + L KD YFE + +SG + T+ LVP+
Sbjct: 66 GCYVASRPLTKDSNYFEVSIVDSGVRGTIAVGLVPQ 101
>AK097394-1|BAC05033.1| 363|Homo sapiens protein ( Homo sapiens
cDNA FLJ40075 fis, clone TESTI2000489. ).
Length = 363
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +3
Query: 213 EYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENLLKRATPYFKRIDDDFRAEW 392
EY + LM +++ + D + DLGE + E+L + K+I AE
Sbjct: 218 EYSIKSVQISTLMRQLQQVKDSQQDELDDLGEMRRKVLESLSDKIQKKKKKILSSVVAET 277
Query: 393 DKFYKEISVDKVFK 434
+ Y+E + K+++
Sbjct: 278 QRPYEEALLQKMWE 291
>AK091924-1|BAC03772.1| 179|Homo sapiens protein ( Homo sapiens
cDNA FLJ34605 fis, clone KIDNE2013489. ).
Length = 179
Score = 29.5 bits (63), Expect = 7.6
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +3
Query: 213 EYGASKDNFNHLMTTVKKDVEGLNDRIKDLGEKSSQDFENLLKRATPYFKRIDDDFRAEW 392
EY + LM +++ + D + DLGE + E+L + K+I AE
Sbjct: 83 EYSIKSVQISTLMRQLQQVKDSQQDELDDLGEMRRKVLESLSDKIQKKKKKILSSVVAET 142
Query: 393 DKFYKEISVDKVFK 434
+ Y+E + K+++
Sbjct: 143 QRPYEEALLQKMWE 156
>AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy chain
dynein type 11 protein.
Length = 4523
Score = 29.5 bits (63), Expect = 7.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 363 RIDDDFRAEWDKFYKEISVDKVFKEFSHT 449
R++DD R DK KE+ +KV E S T
Sbjct: 1444 RVEDDVRRIVDKAVKELGTEKVITEISQT 1472
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,068,796
Number of Sequences: 237096
Number of extensions: 1338668
Number of successful extensions: 2898
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2898
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -