Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_C10
         (576 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.6  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   5.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   5.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.6  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   8.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +1

Query: 100  CRNARQSPVPVLS 138
            CRN+R++PVP L+
Sbjct: 1333 CRNSRRTPVPRLA 1345


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 96  WMSQRQTISSTSSFHYRV 149
           +M  R+TISST++  +RV
Sbjct: 399 YMVWRETISSTATLGFRV 416


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 96  WMSQRQTISSTSSFHYRV 149
           +M  R+TISST++  +RV
Sbjct: 314 YMVWRETISSTATLGFRV 331


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 96  WMSQRQTISSTSSFHYRV 149
           +M  R+TISST++  +RV
Sbjct: 633 YMVWRETISSTATLGFRV 650


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 414 MNGIDSPSRPADIMPLSQRTQ 352
           +NG++   RP ++   SQR Q
Sbjct: 318 LNGLEFAGRPQNLQLQSQRNQ 338


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 408 HSYPGRIPNPSPLTSLAYVPAGALPV 485
           ++YP        +    Y+P  ALPV
Sbjct: 45  YAYPDEASKTMAMMKGEYIPENALPV 70


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 447  LTGKGSGSDQD 415
            L GKG GSD+D
Sbjct: 1608 LRGKGHGSDKD 1618


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,716
Number of Sequences: 438
Number of extensions: 4515
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)