Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_C09
         (538 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071243-1|AAL48865.1|  443|Drosophila melanogaster RE28421p pro...    31   1.00 
AE013599-1827|AAF58292.2|  443|Drosophila melanogaster CG13016-P...    31   1.00 
AE014296-3132|AAO41225.1|  401|Drosophila melanogaster CG9614-PJ...    30   2.3  

>AY071243-1|AAL48865.1|  443|Drosophila melanogaster RE28421p
           protein.
          Length = 443

 Score = 31.1 bits (67), Expect = 1.00
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +3

Query: 234 LIQKNTNHFNQSL*F*EHFMQYILLFF-TEKYIYCLYIMFIRTLSRNARHL 383
           L Q +T H   ++   + +++Y+LL   T + IYCL ++ IR  +  +RHL
Sbjct: 81  LPQAHTRHM-VNIELIDPYLRYLLLILNTRRLIYCLLLVKIRKRNEKSRHL 130


>AE013599-1827|AAF58292.2|  443|Drosophila melanogaster CG13016-PA
           protein.
          Length = 443

 Score = 31.1 bits (67), Expect = 1.00
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +3

Query: 234 LIQKNTNHFNQSL*F*EHFMQYILLFF-TEKYIYCLYIMFIRTLSRNARHL 383
           L Q +T H   ++   + +++Y+LL   T + IYCL ++ IR  +  +RHL
Sbjct: 81  LPQAHTRHM-VNIELIDPYLRYLLLILNTRRLIYCLLLVKIRKRNEKSRHL 130


>AE014296-3132|AAO41225.1|  401|Drosophila melanogaster CG9614-PJ,
           isoform J protein.
          Length = 401

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +3

Query: 294 QYILLFFTE-KYIYCLYIMFIRTLSRNARHLNAKFEIRVIVKPRVTGSR*AGYYCTNLMC 470
           +Y+  FF   +++Y L+   IR  +RN R  +   ++R +V+   T      Y+C   + 
Sbjct: 329 KYVPRFFNHARFLYKLHSKSIRNRNRNNRKPHIDADVREMVRRNFTNEYEFYYFCKQRLY 388

Query: 471 RVPISIRY*ENN 506
           +  ++++  ENN
Sbjct: 389 KQYLALQL-ENN 399


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,512,745
Number of Sequences: 53049
Number of extensions: 325848
Number of successful extensions: 542
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2032955904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)