Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_C06
(382 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111560-1|AAI11561.1| 1040|Homo sapiens protocadherin 10 protein. 32 0.54
AY013874-1|AAK21987.1| 896|Homo sapiens protocadherin 10 protein. 32 0.54
AK024636-1|BAB14940.1| 410|Homo sapiens protein ( Homo sapiens ... 32 0.54
AC105383-1|AAY41018.1| 1040|Homo sapiens unknown protein. 32 0.54
AB037821-1|BAA92638.1| 1093|Homo sapiens KIAA1400 protein protein. 32 0.54
BC035194-1|AAH35194.2| 189|Homo sapiens DNAJC5G protein protein. 26 1.5
AK097736-1|BAC05155.1| 189|Homo sapiens protein ( Homo sapiens ... 26 1.5
AC013413-3|AAY24295.1| 189|Homo sapiens unknown protein. 26 1.5
AF368277-1|AAK60572.1| 109|Homo sapiens gamma cysteine string p... 26 1.6
X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin prot... 28 8.7
AJ406949-1|CAC27588.1| 111|Homo sapiens keratin associated prot... 28 8.7
>BC111560-1|AAI11561.1| 1040|Homo sapiens protocadherin 10 protein.
Length = 1040
Score = 32.3 bits (70), Expect = 0.54
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 113 KTNIYICLAGRCCCWPVCCG 172
K NIY CLA CC CCG
Sbjct: 745 KLNIYTCLASDCCLCCCCCG 764
>AY013874-1|AAK21987.1| 896|Homo sapiens protocadherin 10 protein.
Length = 896
Score = 32.3 bits (70), Expect = 0.54
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 113 KTNIYICLAGRCCCWPVCCG 172
K NIY CLA CC CCG
Sbjct: 745 KLNIYTCLASDCCLCCCCCG 764
>AK024636-1|BAB14940.1| 410|Homo sapiens protein ( Homo sapiens
cDNA: FLJ20983 fis, clone CAE00821. ).
Length = 410
Score = 32.3 bits (70), Expect = 0.54
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 113 KTNIYICLAGRCCCWPVCCG 172
K NIY CLA CC CCG
Sbjct: 115 KLNIYTCLASDCCLCCCCCG 134
>AC105383-1|AAY41018.1| 1040|Homo sapiens unknown protein.
Length = 1040
Score = 32.3 bits (70), Expect = 0.54
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 113 KTNIYICLAGRCCCWPVCCG 172
K NIY CLA CC CCG
Sbjct: 745 KLNIYTCLASDCCLCCCCCG 764
>AB037821-1|BAA92638.1| 1093|Homo sapiens KIAA1400 protein protein.
Length = 1093
Score = 32.3 bits (70), Expect = 0.54
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 113 KTNIYICLAGRCCCWPVCCG 172
K NIY CLA CC CCG
Sbjct: 798 KLNIYTCLASDCCLCCCCCG 817
>BC035194-1|AAH35194.2| 189|Homo sapiens DNAJC5G protein protein.
Length = 189
Score = 26.2 bits (55), Expect(2) = 1.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 113 KTNIYICLAGRCCCWPVCC 169
KT + +C CCC+ CC
Sbjct: 125 KTLVILCTLLTCCCFCCCC 143
Score = 23.4 bits (48), Expect(2) = 1.5
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 146 CCCWPVCCGSI 178
CCC CCG++
Sbjct: 140 CCCCCFCCGAL 150
>AK097736-1|BAC05155.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ40417 fis, clone TESTI2038388, highly similar to
Homo sapiens gamma cysteine string protein mRNA. ).
Length = 189
Score = 26.2 bits (55), Expect(2) = 1.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 113 KTNIYICLAGRCCCWPVCC 169
KT + +C CCC+ CC
Sbjct: 125 KTLVILCTLLTCCCFCCCC 143
Score = 23.4 bits (48), Expect(2) = 1.5
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 146 CCCWPVCCGSI 178
CCC CCG++
Sbjct: 140 CCCCCFCCGAL 150
>AC013413-3|AAY24295.1| 189|Homo sapiens unknown protein.
Length = 189
Score = 26.2 bits (55), Expect(2) = 1.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 113 KTNIYICLAGRCCCWPVCC 169
KT + +C CCC+ CC
Sbjct: 125 KTLVILCTLLTCCCFCCCC 143
Score = 23.4 bits (48), Expect(2) = 1.5
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 146 CCCWPVCCGSI 178
CCC CCG++
Sbjct: 140 CCCCCFCCGAL 150
>AF368277-1|AAK60572.1| 109|Homo sapiens gamma cysteine string
protein protein.
Length = 109
Score = 26.2 bits (55), Expect(2) = 1.6
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 113 KTNIYICLAGRCCCWPVCC 169
KT + +C CCC+ CC
Sbjct: 69 KTLVILCTLLTCCCFCCCC 87
Score = 23.4 bits (48), Expect(2) = 1.6
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 146 CCCWPVCCGSI 178
CCC CCG++
Sbjct: 84 CCCCCFCCGAL 94
>X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin
protein.
Length = 169
Score = 28.3 bits (60), Expect = 8.7
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 131 CLAGRCCCWPVCC 169
C A CCC PVCC
Sbjct: 35 CCAPVCCCKPVCC 47
>AJ406949-1|CAC27588.1| 111|Homo sapiens keratin associated protein
9.5 protein.
Length = 111
Score = 28.3 bits (60), Expect = 8.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 149 CCWPVCCGSILC 184
CC P+CCGS C
Sbjct: 22 CCQPICCGSSCC 33
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,739,949
Number of Sequences: 237096
Number of extensions: 987014
Number of successful extensions: 2679
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2586
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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