Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_C04
(532 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 253 2e-67
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 253 2e-67
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 253 2e-67
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 253 2e-67
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 249 5e-66
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 1e-18
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein. 31 3.3
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592... 31 3.3
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592... 31 3.3
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592... 31 3.3
L32163-1|AAA36817.1| 622|Homo sapiens zinc finger protein protein. 29 7.7
AF011573-1|AAB84385.1| 1029|Homo sapiens zinc finger protein pro... 29 7.7
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 253 bits (620), Expect = 2e-67
Identities = 119/135 (88%), Positives = 127/135 (94%)
Frame = +1
Query: 127 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 306
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 307 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 486
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 487 GRAGTVRRQAVDVSP 531
GRAGTVRRQAVDVSP
Sbjct: 129 GRAGTVRRQAVDVSP 143
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 253 bits (620), Expect = 2e-67
Identities = 119/135 (88%), Positives = 127/135 (94%)
Frame = +1
Query: 127 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 306
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 307 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 486
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 487 GRAGTVRRQAVDVSP 531
GRAGTVRRQAVDVSP
Sbjct: 129 GRAGTVRRQAVDVSP 143
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 253 bits (620), Expect = 2e-67
Identities = 119/135 (88%), Positives = 127/135 (94%)
Frame = +1
Query: 127 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 306
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 307 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 486
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 487 GRAGTVRRQAVDVSP 531
GRAGTVRRQAVDVSP
Sbjct: 129 GRAGTVRRQAVDVSP 143
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 253 bits (620), Expect = 2e-67
Identities = 119/135 (88%), Positives = 127/135 (94%)
Frame = +1
Query: 127 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 306
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 307 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 486
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 487 GRAGTVRRQAVDVSP 531
GRAGTVRRQAVDVSP
Sbjct: 129 GRAGTVRRQAVDVSP 143
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 249 bits (609), Expect = 5e-66
Identities = 117/135 (86%), Positives = 125/135 (92%)
Frame = +1
Query: 127 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 306
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA FRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 307 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 486
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 487 GRAGTVRRQAVDVSP 531
GRAGTVRRQAVDVSP
Sbjct: 129 GRAGTVRRQAVDVSP 143
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 1e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +1
Query: 292 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 447
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
Length = 1317
Score = 30.7 bits (66), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 208 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 351
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 1039 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1085
>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 208 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 351
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 208 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 351
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 3.3
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 208 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 351
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>L32163-1|AAA36817.1| 622|Homo sapiens zinc finger protein protein.
Length = 622
Score = 29.5 bits (63), Expect = 7.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 323 LVKRSTIGH*ALRNRL*AYLPAECGKYFAYFS 228
++K+S IGH + R +Y +CGK F+Y S
Sbjct: 406 ILKKSLIGHQRIHTREKSYKCNDCGKVFSYRS 437
>AF011573-1|AAB84385.1| 1029|Homo sapiens zinc finger protein
protein.
Length = 1029
Score = 29.5 bits (63), Expect = 7.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 323 LVKRSTIGH*ALRNRL*AYLPAECGKYFAYFS 228
++K+S IGH + R +Y +CGK F+Y S
Sbjct: 800 ILKKSLIGHQRIHTREKSYKCNDCGKVFSYRS 831
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,188,774
Number of Sequences: 237096
Number of extensions: 1937046
Number of successful extensions: 4264
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4264
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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