Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_C04
(532 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U48394-1|AAB61633.1| 228|Drosophila melanogaster M(1)15D protein. 246 1e-65
AY075368-1|AAL68215.1| 228|Drosophila melanogaster GM13047p pro... 246 1e-65
AE014298-2526|AAF48700.1| 228|Drosophila melanogaster CG8922-PA... 246 1e-65
AY071138-1|AAL48760.1| 230|Drosophila melanogaster RE17836p pro... 242 2e-64
AE014297-1922|AAF55116.1| 230|Drosophila melanogaster CG7014-PA... 242 2e-64
L20297-1|AAA28860.1| 685|Drosophila melanogaster neurotrophic r... 31 1.3
AE014134-1796|AAF52885.1| 685|Drosophila melanogaster CG4926-PA... 31 1.3
AF289996-1|AAG02461.1| 1475|Drosophila melanogaster thyroid horm... 30 1.7
AE014296-3591|AAF51757.2| 1475|Drosophila melanogaster CG7162-PA... 30 1.7
AF160933-1|AAD46873.1| 756|Drosophila melanogaster LD14168p pro... 28 9.1
AE014297-4305|AAN14148.1| 664|Drosophila melanogaster CG1957-PB... 28 9.1
AE014297-4304|AAF56844.1| 756|Drosophila melanogaster CG1957-PA... 28 9.1
>U48394-1|AAB61633.1| 228|Drosophila melanogaster M(1)15D protein.
Length = 228
Score = 246 bits (602), Expect = 1e-65
Identities = 116/131 (88%), Positives = 125/131 (95%)
Frame = +1
Query: 139 DIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERL 318
++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGRYA KRFRKAQCPIVERL
Sbjct: 37 ELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRYAAKRFRKAQCPIVERL 96
Query: 319 TNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 498
T SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+AIINSGPREDSTRIGRAG
Sbjct: 97 TCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAG 156
Query: 499 TVRRQAVDVSP 531
TVRRQAVDVSP
Sbjct: 157 TVRRQAVDVSP 167
>AY075368-1|AAL68215.1| 228|Drosophila melanogaster GM13047p
protein.
Length = 228
Score = 246 bits (602), Expect = 1e-65
Identities = 116/131 (88%), Positives = 125/131 (95%)
Frame = +1
Query: 139 DIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERL 318
++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGRYA KRFRKAQCPIVERL
Sbjct: 37 ELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRYAAKRFRKAQCPIVERL 96
Query: 319 TNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 498
T SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+AIINSGPREDSTRIGRAG
Sbjct: 97 TCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAG 156
Query: 499 TVRRQAVDVSP 531
TVRRQAVDVSP
Sbjct: 157 TVRRQAVDVSP 167
>AE014298-2526|AAF48700.1| 228|Drosophila melanogaster CG8922-PA
protein.
Length = 228
Score = 246 bits (602), Expect = 1e-65
Identities = 116/131 (88%), Positives = 125/131 (95%)
Frame = +1
Query: 139 DIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERL 318
++PEIKLFGRWSC DV V+D+SLQDYISVKEK+A+YLPHSAGRYA KRFRKAQCPIVERL
Sbjct: 37 ELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRYAAKRFRKAQCPIVERL 96
Query: 319 TNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 498
T SLMM GRNNGKKLMA RIVKH+FEIIHLLTGENPLQ+LV+AIINSGPREDSTRIGRAG
Sbjct: 97 TCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAG 156
Query: 499 TVRRQAVDVSP 531
TVRRQAVDVSP
Sbjct: 157 TVRRQAVDVSP 167
>AY071138-1|AAL48760.1| 230|Drosophila melanogaster RE17836p
protein.
Length = 230
Score = 242 bits (593), Expect = 2e-64
Identities = 113/142 (79%), Positives = 126/142 (88%)
Frame = +1
Query: 106 VVDNMPLPQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 285
VV MP + + PEIKLFGRW+C D+ +SD+SLQDYI+VKEK+A+YLPHSAGRYA KRF
Sbjct: 28 VVTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFARYLPHSAGRYAAKRF 87
Query: 286 RKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 465
RKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEIIHLLT ENPLQV V AI+NSGP
Sbjct: 88 RKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAIVNSGP 147
Query: 466 REDSTRIGRAGTVRRQAVDVSP 531
REDSTRIGRAGTVRRQAVDVSP
Sbjct: 148 REDSTRIGRAGTVRRQAVDVSP 169
>AE014297-1922|AAF55116.1| 230|Drosophila melanogaster CG7014-PA
protein.
Length = 230
Score = 242 bits (593), Expect = 2e-64
Identities = 113/142 (79%), Positives = 126/142 (88%)
Frame = +1
Query: 106 VVDNMPLPQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 285
VV MP + + PEIKLFGRW+C D+ +SD+SLQDYI+VKEK+A+YLPHSAGRYA KRF
Sbjct: 28 VVTTMPAQEVTEWPEIKLFGRWACDDISISDISLQDYIAVKEKFARYLPHSAGRYAAKRF 87
Query: 286 RKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 465
RKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEIIHLLT ENPLQV V AI+NSGP
Sbjct: 88 RKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAIVNSGP 147
Query: 466 REDSTRIGRAGTVRRQAVDVSP 531
REDSTRIGRAGTVRRQAVDVSP
Sbjct: 148 REDSTRIGRAGTVRRQAVDVSP 169
>L20297-1|AAA28860.1| 685|Drosophila melanogaster neurotrophic
receptor protein.
Length = 685
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 246 IFCILLFYRNIILQRHVRYLNVITTPSPKKFDFGN 142
IF I+LF R I+ +R ++ I TPS K +GN
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366
>AE014134-1796|AAF52885.1| 685|Drosophila melanogaster CG4926-PA
protein.
Length = 685
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 246 IFCILLFYRNIILQRHVRYLNVITTPSPKKFDFGN 142
IF I+LF R I+ +R ++ I TPS K +GN
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366
>AF289996-1|AAG02461.1| 1475|Drosophila melanogaster thyroid hormone
receptor-associatedprotein TRAP220 protein.
Length = 1475
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 76 WTENRRPGGMVVDNMPLPQPADIPEIKLF 162
+T+NR+ G +V ++P +PA +P I F
Sbjct: 387 FTDNRKLQGTLVSSLPFTEPAQVPRIVAF 415
>AE014296-3591|AAF51757.2| 1475|Drosophila melanogaster CG7162-PA
protein.
Length = 1475
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 76 WTENRRPGGMVVDNMPLPQPADIPEIKLF 162
+T+NR+ G +V ++P +PA +P I F
Sbjct: 387 FTDNRKLQGTLVSSLPFTEPAQVPRIVAF 415
>AF160933-1|AAD46873.1| 756|Drosophila melanogaster LD14168p
protein.
Length = 756
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 310 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLL 411
E+L +++ RNNG L+AV E+ H+L
Sbjct: 217 EKLMTNILQTVRNNGNVLIAVDTAGRVLELAHML 250
>AE014297-4305|AAN14148.1| 664|Drosophila melanogaster CG1957-PB,
isoform B protein.
Length = 664
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 310 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLL 411
E+L +++ RNNG L+AV E+ H+L
Sbjct: 125 EKLMTNILQTVRNNGNVLIAVDTAGRVLELAHML 158
>AE014297-4304|AAF56844.1| 756|Drosophila melanogaster CG1957-PA,
isoform A protein.
Length = 756
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 310 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLL 411
E+L +++ RNNG L+AV E+ H+L
Sbjct: 217 EKLMTNILQTVRNNGNVLIAVDTAGRVLELAHML 250
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,011,013
Number of Sequences: 53049
Number of extensions: 600417
Number of successful extensions: 1667
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1667
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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