Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_C03
         (574 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal prot...   140   1e-33
AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p pro...   140   1e-33
AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,...   140   1e-33
AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,...   140   1e-33
AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,...   140   1e-33

>X82782-1|CAA58023.1|  271|Drosophila melanogaster ribosomal protein
           L7a protein.
          Length = 271

 Score =  140 bits (339), Expect = 1e-33
 Identities = 67/104 (64%), Positives = 76/104 (73%)
 Frame = +1

Query: 187 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 366
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 367 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKLPN 498
           TA  LFK+LEKYRPE+                   D  P K P+
Sbjct: 96  TAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPS 139



 Score = 37.1 bits (82), Expect = 0.017
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = +3

Query: 516 TNTVTKLVEKKKAQLVVIA 572
           TNTVTKL+E+KKAQLVVIA
Sbjct: 145 TNTVTKLIEQKKAQLVVIA 163


>AY089570-1|AAL90308.1|  271|Drosophila melanogaster RE05022p
           protein.
          Length = 271

 Score =  140 bits (339), Expect = 1e-33
 Identities = 67/104 (64%), Positives = 76/104 (73%)
 Frame = +1

Query: 187 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 366
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 367 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKLPN 498
           TA  LFK+LEKYRPE+                   D  P K P+
Sbjct: 96  TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPS 139



 Score = 37.1 bits (82), Expect = 0.017
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = +3

Query: 516 TNTVTKLVEKKKAQLVVIA 572
           TNTVTKL+E+KKAQLVVIA
Sbjct: 145 TNTVTKLIEQKKAQLVVIA 163


>AE014298-903|AAF46169.1|  271|Drosophila melanogaster CG3314-PD,
           isoform D protein.
          Length = 271

 Score =  140 bits (339), Expect = 1e-33
 Identities = 67/104 (64%), Positives = 76/104 (73%)
 Frame = +1

Query: 187 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 366
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 367 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKLPN 498
           TA  LFK+LEKYRPE+                   D  P K P+
Sbjct: 96  TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPS 139



 Score = 37.1 bits (82), Expect = 0.017
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = +3

Query: 516 TNTVTKLVEKKKAQLVVIA 572
           TNTVTKL+E+KKAQLVVIA
Sbjct: 145 TNTVTKLIEQKKAQLVVIA 163


>AE014298-902|AAN09172.1|  271|Drosophila melanogaster CG3314-PC,
           isoform C protein.
          Length = 271

 Score =  140 bits (339), Expect = 1e-33
 Identities = 67/104 (64%), Positives = 76/104 (73%)
 Frame = +1

Query: 187 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 366
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 367 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKLPN 498
           TA  LFK+LEKYRPE+                   D  P K P+
Sbjct: 96  TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPS 139



 Score = 37.1 bits (82), Expect = 0.017
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = +3

Query: 516 TNTVTKLVEKKKAQLVVIA 572
           TNTVTKL+E+KKAQLVVIA
Sbjct: 145 TNTVTKLIEQKKAQLVVIA 163


>AE014298-901|AAN09170.1|  271|Drosophila melanogaster CG3314-PA,
           isoform A protein.
          Length = 271

 Score =  140 bits (339), Expect = 1e-33
 Identities = 67/104 (64%), Positives = 76/104 (73%)
 Frame = +1

Query: 187 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 366
           LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36  LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95

Query: 367 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKLPN 498
           TA  LFK+LEKYRPE+                   D  P K P+
Sbjct: 96  TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPS 139



 Score = 37.1 bits (82), Expect = 0.017
 Identities = 17/19 (89%), Positives = 19/19 (100%)
 Frame = +3

Query: 516 TNTVTKLVEKKKAQLVVIA 572
           TNTVTKL+E+KKAQLVVIA
Sbjct: 145 TNTVTKLIEQKKAQLVVIA 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,023,864
Number of Sequences: 53049
Number of extensions: 424570
Number of successful extensions: 1253
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)