Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_C02
(359 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 36 0.011
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 32 0.14
U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical pr... 30 0.56
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 29 1.3
AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical... 29 1.3
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical pr... 26 6.9
U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical pr... 26 6.9
AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and cap... 26 9.1
AF016655-3|AAU05587.1| 322|Caenorhabditis elegans Serpentine re... 26 9.1
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 35.5 bits (78), Expect = 0.011
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = -2
Query: 358 YEDPDTAGN*ASYVKTKNLGGVSIMDLSMDDFRGLCT---GDKYPIL 227
Y+D ++ N +YVK + GG + L DDF C+ G YP++
Sbjct: 370 YDDEESFANKMAYVKREGYGGAFVWTLDFDDFNAGCSNSNGQLYPLI 416
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical protein
C25A8.4 protein.
Length = 1067
Score = 31.9 bits (69), Expect = 0.14
Identities = 11/34 (32%), Positives = 25/34 (73%)
Frame = -2
Query: 322 YVKTKNLGGVSIMDLSMDDFRGLCTGDKYPILRA 221
Y++ + LGG+++ +++ DD+ G+C +PIL++
Sbjct: 1027 YIQREQLGGIAL-NVNGDDYTGICGRGSFPILKS 1059
>U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical
protein C45E5.3 protein.
Length = 266
Score = 29.9 bits (64), Expect = 0.56
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2
Query: 328 ASYVKTKNLGGVSIMDLSMDD 266
A+YVK+KNLGGV I + DD
Sbjct: 214 ANYVKSKNLGGVWIWTMEHDD 234
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2
Query: 322 YVKTKNLGGVSIMDLSMDDFR 260
YV KNLGGV I + MDD R
Sbjct: 359 YVMNKNLGGVWIWSVDMDDER 379
>AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical
protein Y22D7AL.14 protein.
Length = 264
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -2
Query: 358 YEDPDTAGN*ASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYPIL 227
YE+ + ++ + +GGV + + DD G C YP+L
Sbjct: 212 YENQQSILAKMAFARKLQVGGVMVFSIGSDDVTGKCGHGPYPLL 255
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 358 YEDPDTAGN*ASYVKTKNLGGVSIMDLSMDD 266
+E DT YVK + LGGV I + MDD
Sbjct: 314 FETNDTIAAKIDYVKDRILGGVWIWGVDMDD 344
>Z68317-3|CAA92687.1| 599|Caenorhabditis elegans Hypothetical
protein T01H3.3 protein.
Length = 599
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 224 PQDRIFISSAKTTKIIHGKVHDGHTAKVLCFHVTSL 331
PQD ++S + KI+ GKV++ + + L TSL
Sbjct: 344 PQDHPWVSGVELNKIVAGKVNELRSNRALADAYTSL 379
>Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical
protein R09D1.8 protein.
Length = 446
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 358 YEDPDTAGN*ASYVKTKNLGGVSIMDLSMDD 266
+E DT YVK + LGGV I + MDD
Sbjct: 391 FETNDTIAAKIDYVKDRILGGVWIWAVDMDD 421
>Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical
protein R09D1.6 protein.
Length = 444
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 358 YEDPDTAGN*ASYVKTKNLGGVSIMDLSMDD 266
+E DT YVK + LGGV I + MDD
Sbjct: 389 FETNDTIAAKIDYVKDRILGGVWIWAVDMDD 419
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -2
Query: 358 YEDPDTAGN*ASYVKTKNLGGVSIMDLSMDDFRG 257
YE+ ++ + Y+ N+GGV I + DD +G
Sbjct: 347 YENAESLKHKVDYIVENNIGGVMIWAIDFDDDQG 380
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 26.6 bits (56), Expect = 5.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 322 YVKTKNLGGVSIMDLSMDD 266
YV+ NLGGV I + MDD
Sbjct: 403 YVQNMNLGGVWIWQMDMDD 421
>Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical
protein C08H9.6 protein.
Length = 394
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 358 YEDPDTAGN*ASYVKTKNLGGVSIMDLSMDD 266
+E+ + YV+ KN+GG+ I ++ DD
Sbjct: 326 FENEKSLSEKVIYVRNKNIGGLVIWNVDQDD 356
>U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical
protein C45E5.2 protein.
Length = 469
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 328 ASYVKTKNLGGVSIMDLSMDD 266
A+YVK+ NLGGV I + DD
Sbjct: 324 ANYVKSMNLGGVWIWLMENDD 344
>AF047660-1|AAC04431.1| 900|Caenorhabditis elegans Osm-9 and
capsaicin receptor-relatedprotein 2 protein.
Length = 900
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Frame = -3
Query: 309 RTLAVCPSWTFPW---MIFVVFALEINI 235
R LA+CP+ T W ++F++F L ++I
Sbjct: 726 RNLALCPANTMVWIGKVVFILFELFVSI 753
>AF016655-3|AAU05587.1| 322|Caenorhabditis elegans Serpentine
receptor, class z protein67 protein.
Length = 322
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +3
Query: 39 INNHYFN-IKKTL*V-LCNCLDIVFYNK 116
I NHY+N +K TL + C C+ + F+++
Sbjct: 59 ITNHYYNMLKLTLPIWTCFCVSVYFFHR 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,230,819
Number of Sequences: 27780
Number of extensions: 132676
Number of successful extensions: 248
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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