Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_C02
         (359 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   1.9  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   1.9  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   2.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   5.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   5.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   5.9  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    21   5.9  

>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +3

Query: 12  KYYCILSIIINNHYFNIKKTL*VLCNCLDIVFYNKSIVK 128
           K + I+S + NN+ +N      + CN    ++YN + ++
Sbjct: 77  KEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIE 115


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 1.9
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +3

Query: 12  KYYCILSIIINNHYFNIKKTL*VLCNCLDIVFYNKSIVK 128
           K + I+S + NN+ +N      + CN    ++YN + ++
Sbjct: 77  KEHKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIE 115


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +3

Query: 12  KYYCILSIIINNHYFNIKKTL*VLCNCLDIVFYNKSIVK 128
           K + I+S + NN+ +N      + CN    ++YN + ++
Sbjct: 77  KEHKIISSLSNNYNYNNNNYKKLYCNNYRKLYYNINYIE 115


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 357 TKILTRPETKLV 322
           T ++TRP+TK +
Sbjct: 146 TAVITRPDTKFI 157


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 357 TKILTRPETKLV 322
           T ++TRP+TK +
Sbjct: 146 TAVITRPDTKFI 157


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 212 PTLNFFSIFL 183
           P  NFFSIFL
Sbjct: 414 PKTNFFSIFL 423


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 181 FKNIEKKFKVG 213
           FKN E KFK+G
Sbjct: 58  FKNTEIKFKLG 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,492
Number of Sequences: 438
Number of extensions: 1773
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8432340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)