Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_C01
         (376 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   1.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   2.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   3.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        20   9.5  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 93  YILFQIILTFSGVF 52
           +IL+ I+ TFSG+F
Sbjct: 251 FILWHIVGTFSGIF 264


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 160 HPVRHDSTFSRLFFSTVEIVNLIYIISNNTN 68
           +P+  D      F+S   IVN++YI +   N
Sbjct: 262 NPIMWDRVMLLTFWSAFFIVNVLYICNQCYN 292


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 213 GHIPVLLVVDHRHR 172
           GHIP+    DHR R
Sbjct: 244 GHIPIRQCDDHRDR 257


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 135 NVESCRTGCMHPSG 176
           NV+ CR G  H +G
Sbjct: 260 NVDDCRPGACHNNG 273


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 353 APSPYGRAAFKS 318
           APSPYG   F++
Sbjct: 397 APSPYGGQMFEA 408


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,605
Number of Sequences: 336
Number of extensions: 1792
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)