Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_C01
         (376 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    24   2.1  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   2.8  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      22   6.5  

>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 12  SASDIFRRLVYFN*KRLKKLVLFEIIYIKFTISTVLKKSRENVESCR 152
           +  D+ R L     +++K  VL + +  +  IS ++KKSRE  E  R
Sbjct: 48  TVEDLQRSLAAEKEEKMKLTVLLQELQAQ--ISIMMKKSRETKEEAR 92


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 211 PYSCSAGG*PPPPLGCIHP 155
           P SCS+   PPP   C  P
Sbjct: 450 PISCSSNSIPPPSNHCSSP 468


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 102 TISTVL-KKSRENVESCRTGCMHPSGGGG 185
           ++  VL +++++ V     GCM P  GGG
Sbjct: 100 SVEAVLDEETKQLVPEYSHGCMSPEQGGG 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,040
Number of Sequences: 2352
Number of extensions: 8432
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)