Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_C01
(376 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16563-1|BAA03997.1| 297|Homo sapiens ATP synthase gamma-subuni... 87 2e-17
D16562-1|BAA03996.1| 298|Homo sapiens ATP synthase gamma-subuni... 87 2e-17
D16561-2|BAA03995.1| 298|Homo sapiens ATP synthase gamma-subuni... 87 2e-17
D16561-1|BAA03994.1| 297|Homo sapiens ATP synthase gamma-subuni... 87 2e-17
CR457403-1|CAG33684.1| 298|Homo sapiens ATP5C1 protein. 87 2e-17
BC026049-1|AAH26049.1| 291|Homo sapiens Unknown (protein for IM... 87 2e-17
BC020824-1|AAH20824.1| 298|Homo sapiens ATP synthase, H+ transp... 87 2e-17
BC013394-1|AAH13394.1| 298|Homo sapiens ATP synthase, H+ transp... 87 2e-17
BC000931-1|AAH00931.1| 298|Homo sapiens ATP synthase, H+ transp... 87 2e-17
BC000470-1|AAH00470.1| 298|Homo sapiens ATP synthase, H+ transp... 87 2e-17
AL353754-4|CAH73454.1| 297|Homo sapiens ATP synthase, H+ transp... 87 2e-17
AL353754-3|CAH73453.1| 298|Homo sapiens ATP synthase, H+ transp... 87 2e-17
AL158044-9|CAI12961.1| 297|Homo sapiens ATP synthase, H+ transp... 87 2e-17
AL158044-8|CAI12960.1| 298|Homo sapiens ATP synthase, H+ transp... 87 2e-17
BC016812-1|AAH16812.1| 298|Homo sapiens ATP synthase, H+ transp... 85 7e-17
BC024221-1|AAH24221.1| 314|Homo sapiens ATG3 autophagy related ... 29 6.5
BC002830-1|AAH02830.1| 317|Homo sapiens ATG3 protein protein. 29 6.5
AK025778-1|BAB15237.1| 155|Homo sapiens or. protein. 29 6.5
AF202092-1|AAG35611.1| 314|Homo sapiens PC3-96 protein. 29 6.5
AB079384-1|BAB90843.1| 314|Homo sapiens Apg3p protein. 29 6.5
D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein. 28 8.6
BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence si... 28 8.6
AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein. 28 8.6
>D16563-1|BAA03997.1| 297|Homo sapiens ATP synthase gamma-subunit
protein.
Length = 297
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>D16562-1|BAA03996.1| 298|Homo sapiens ATP synthase gamma-subunit
protein.
Length = 298
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>D16561-2|BAA03995.1| 298|Homo sapiens ATP synthase gamma-subunit
protein.
Length = 298
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>D16561-1|BAA03994.1| 297|Homo sapiens ATP synthase gamma-subunit
protein.
Length = 297
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>CR457403-1|CAG33684.1| 298|Homo sapiens ATP5C1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>BC026049-1|AAH26049.1| 291|Homo sapiens Unknown (protein for
IMAGE:4908447) protein.
Length = 291
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 14 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 73
>BC020824-1|AAH20824.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>BC013394-1|AAH13394.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>BC000931-1|AAH00931.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>BC000470-1|AAH00470.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>AL353754-4|CAH73454.1| 297|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 297
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>AL353754-3|CAH73453.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>AL158044-9|CAI12961.1| 297|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 297
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>AL158044-8|CAI12960.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>BC016812-1|AAH16812.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 85.0 bits (201), Expect = 7e-17
Identities = 42/60 (70%), Positives = 50/60 (83%)
Frame = +1
Query: 196 QNRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERA 375
Q RNMATLK I+ RLKS+KNIQKI +SMKMV+AAKY RAER+LK AR YG G++ YE+A
Sbjct: 21 QVRNMATLKDITRRLKSIKNIQKIAKSMKMVAAAKYARAERELKPARIYGLGSLALYEKA 80
>BC024221-1|AAH24221.1| 314|Homo sapiens ATG3 autophagy related 3
homolog (S. cerevisiae) protein.
Length = 314
Score = 28.7 bits (61), Expect = 6.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 184 PPPPLGCIHPVRHDSTFSRLFFSTVE 107
PPPP+ +HP RH ++ + E
Sbjct: 254 PPPPMCSVHPCRHAEVMKKIIETVAE 279
>BC002830-1|AAH02830.1| 317|Homo sapiens ATG3 protein protein.
Length = 317
Score = 28.7 bits (61), Expect = 6.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 184 PPPPLGCIHPVRHDSTFSRLFFSTVE 107
PPPP+ +HP RH ++ + E
Sbjct: 254 PPPPMCSVHPCRHAEVMKKIIETVAE 279
>AK025778-1|BAB15237.1| 155|Homo sapiens or. protein.
Length = 155
Score = 28.7 bits (61), Expect = 6.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 184 PPPPLGCIHPVRHDSTFSRLFFSTVE 107
PPPP+ +HP RH ++ + E
Sbjct: 98 PPPPMCSVHPCRHAEVMKKIIETVAE 123
>AF202092-1|AAG35611.1| 314|Homo sapiens PC3-96 protein.
Length = 314
Score = 28.7 bits (61), Expect = 6.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 184 PPPPLGCIHPVRHDSTFSRLFFSTVE 107
PPPP+ +HP RH ++ + E
Sbjct: 254 PPPPMCSVHPCRHAEVMKKIIETVAE 279
>AB079384-1|BAB90843.1| 314|Homo sapiens Apg3p protein.
Length = 314
Score = 28.7 bits (61), Expect = 6.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 184 PPPPLGCIHPVRHDSTFSRLFFSTVE 107
PPPP+ +HP RH ++ + E
Sbjct: 254 PPPPMCSVHPCRHAEVMKKIIETVAE 279
>D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein.
Length = 2035
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 221 LSVAIFLFCWWLTTATAWVHTPGATRLNIF 132
L VA+F + +WL +V GATR++IF
Sbjct: 672 LKVAVFRYLFWLVLVVVFV--TGATRISIF 699
>BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence
similarity 38, member A protein.
Length = 2035
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 221 LSVAIFLFCWWLTTATAWVHTPGATRLNIF 132
L VA+F + +WL +V GATR++IF
Sbjct: 672 LKVAVFRYLFWLVLVVVFV--TGATRISIF 699
>AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein.
Length = 2090
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3
Query: 221 LSVAIFLFCWWLTTATAWVHTPGATRLNIF 132
L VA+F + +WL +V GATR++IF
Sbjct: 727 LKVAVFRYLFWLVLVVVFV--TGATRISIF 754
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,577,831
Number of Sequences: 237096
Number of extensions: 1277147
Number of successful extensions: 2490
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2490
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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