Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_B23
(639 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020665-1|AAH20665.1| 363|Homo sapiens betaine-homocysteine me... 36 0.16
AF257473-1|AAG41356.1| 363|Homo sapiens betaine-homocysteine me... 36 0.16
U50929-1|AAC50668.1| 406|Homo sapiens betaine:homocysteine meth... 35 0.21
BC012616-1|AAH12616.1| 406|Homo sapiens betaine-homocysteine me... 35 0.21
AF118378-1|AAD22043.1| 406|Homo sapiens betaine-homocysteine me... 35 0.21
M94151-1|AAA58407.2| 953|Homo sapiens cadherin-associated prote... 32 1.5
AC008067-1|AAY15073.1| 322|Homo sapiens unknown protein. 32 1.5
BC060855-1|AAH60855.1| 764|Homo sapiens SMEK homolog 2, suppres... 31 4.6
BC006215-1|AAH06215.1| 817|Homo sapiens SMEK2 protein protein. 31 4.6
AY825269-1|AAV97751.1| 849|Homo sapiens KIAA1387 protein protein. 31 4.6
AY825268-1|AAV97750.1| 817|Homo sapiens KIAA1387 protein protein. 31 4.6
AC015982-2|AAY24270.1| 817|Homo sapiens unknown protein. 31 4.6
AB037808-1|BAA92625.1| 950|Homo sapiens KIAA1387 protein protein. 31 4.6
BC065037-1|AAH65037.1| 531|Homo sapiens cell division cycle 73,... 30 8.0
BC014351-1|AAH14351.2| 409|Homo sapiens CDC73 protein protein. 30 8.0
AL390863-1|CAH71589.1| 531|Homo sapiens cell division cycle 73,... 30 8.0
AL139133-1|CAH71049.1| 531|Homo sapiens cell division cycle 73,... 30 8.0
AK026969-1|BAB15608.1| 355|Homo sapiens protein ( Homo sapiens ... 30 8.0
AF312865-1|AAG45339.1| 531|Homo sapiens C1orf28 protein. 30 8.0
>BC020665-1|AAH20665.1| 363|Homo sapiens betaine-homocysteine
methyltransferase 2 protein.
Length = 363
Score = 35.5 bits (78), Expect = 0.16
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 328 LWSARYLQTHPQEVINTHLDFLRAGADMIMTNTSQAS 438
LW+ + HP V H++FLRAG++++ T T AS
Sbjct: 43 LWTPEAVIEHPDAVRQLHMEFLRAGSNVMQTFTFSAS 79
>AF257473-1|AAG41356.1| 363|Homo sapiens betaine-homocysteine
methyltransferase 2 protein.
Length = 363
Score = 35.5 bits (78), Expect = 0.16
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 328 LWSARYLQTHPQEVINTHLDFLRAGADMIMTNTSQAS 438
LW+ + HP V H++FLRAG++++ T T AS
Sbjct: 43 LWTPEAVIEHPDAVRQLHMEFLRAGSNVMQTFTFSAS 79
>U50929-1|AAC50668.1| 406|Homo sapiens betaine:homocysteine
methyltransferase protein.
Length = 406
Score = 35.1 bits (77), Expect = 0.21
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +1
Query: 256 VFVLDGGFSSQLSCHVGTTADGDPLWSARYLQTHPQEVINTHLDFLRAGADMIMTNTSQA 435
+ + DGGF L G G W+ HP+ V H +FLRAG++++ T T A
Sbjct: 22 IVIGDGGFVFALEKR-GYVKAGP--WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYA 78
Query: 436 SVNGFVKHLGLTPE--AGYELIKSAVVLAKRARD 531
S + E +G E+ ++A +A++ D
Sbjct: 79 SEDKLENRGNYVLEKISGQEVNEAACDIARQVAD 112
>BC012616-1|AAH12616.1| 406|Homo sapiens betaine-homocysteine
methyltransferase protein.
Length = 406
Score = 35.1 bits (77), Expect = 0.21
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +1
Query: 256 VFVLDGGFSSQLSCHVGTTADGDPLWSARYLQTHPQEVINTHLDFLRAGADMIMTNTSQA 435
+ + DGGF L G G W+ HP+ V H +FLRAG++++ T T A
Sbjct: 22 IVIGDGGFVFALEKR-GYVKAGP--WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYA 78
Query: 436 SVNGFVKHLGLTPE--AGYELIKSAVVLAKRARD 531
S + E +G E+ ++A +A++ D
Sbjct: 79 SEDKLENRGNYVLEKISGQEVNEAACDIARQVAD 112
>AF118378-1|AAD22043.1| 406|Homo sapiens betaine-homocysteine
methyltransferase protein.
Length = 406
Score = 35.1 bits (77), Expect = 0.21
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +1
Query: 256 VFVLDGGFSSQLSCHVGTTADGDPLWSARYLQTHPQEVINTHLDFLRAGADMIMTNTSQA 435
+ + DGGF L G G W+ HP+ V H +FLRAG++++ T T A
Sbjct: 22 IVIGDGGFVFALEKR-GYVKAGP--WTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYA 78
Query: 436 SVNGFVKHLGLTPE--AGYELIKSAVVLAKRARD 531
S + E +G E+ ++A +A++ D
Sbjct: 79 SEDKLENRGNYVLEKISGQEVNEAACDIARQVAD 112
>M94151-1|AAA58407.2| 953|Homo sapiens cadherin-associated
protein-related protein.
Length = 953
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 262 VLDGGFSSQLSCHVGTTADGDPLWS 336
V+DGG +SQLS H+ T A+G P+ S
Sbjct: 827 VIDGGRASQLSTHLPTCAEGAPIGS 851
>AC008067-1|AAY15073.1| 322|Homo sapiens unknown protein.
Length = 322
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 262 VLDGGFSSQLSCHVGTTADGDPLWS 336
V+DGG +SQLS H+ T A+G P+ S
Sbjct: 196 VIDGGRASQLSTHLPTCAEGAPIGS 220
>BC060855-1|AAH60855.1| 764|Homo sapiens SMEK homolog 2, suppressor
of mek1 (Dictyostelium) protein.
Length = 764
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -2
Query: 464 PRCLTNPLTEAWDVLVIIMSAPARRKSRCVLITSWGWVWRYLAL 333
P C N L E D++ ++S+P RR+ + + + G++ + L L
Sbjct: 135 PTCELNKLEEIADLVTSVLSSPIRREKLALALENEGYIKKLLQL 178
>BC006215-1|AAH06215.1| 817|Homo sapiens SMEK2 protein protein.
Length = 817
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -2
Query: 464 PRCLTNPLTEAWDVLVIIMSAPARRKSRCVLITSWGWVWRYLAL 333
P C N L E D++ ++S+P RR+ + + + G++ + L L
Sbjct: 135 PTCELNKLEEIADLVTSVLSSPIRREKLALALENEGYIKKLLQL 178
>AY825269-1|AAV97751.1| 849|Homo sapiens KIAA1387 protein protein.
Length = 849
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -2
Query: 464 PRCLTNPLTEAWDVLVIIMSAPARRKSRCVLITSWGWVWRYLAL 333
P C N L E D++ ++S+P RR+ + + + G++ + L L
Sbjct: 135 PTCELNKLEEIADLVTSVLSSPIRREKLALALENEGYIKKLLQL 178
>AY825268-1|AAV97750.1| 817|Homo sapiens KIAA1387 protein protein.
Length = 817
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -2
Query: 464 PRCLTNPLTEAWDVLVIIMSAPARRKSRCVLITSWGWVWRYLAL 333
P C N L E D++ ++S+P RR+ + + + G++ + L L
Sbjct: 135 PTCELNKLEEIADLVTSVLSSPIRREKLALALENEGYIKKLLQL 178
>AC015982-2|AAY24270.1| 817|Homo sapiens unknown protein.
Length = 817
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -2
Query: 464 PRCLTNPLTEAWDVLVIIMSAPARRKSRCVLITSWGWVWRYLAL 333
P C N L E D++ ++S+P RR+ + + + G++ + L L
Sbjct: 135 PTCELNKLEEIADLVTSVLSSPIRREKLALALENEGYIKKLLQL 178
>AB037808-1|BAA92625.1| 950|Homo sapiens KIAA1387 protein protein.
Length = 950
Score = 30.7 bits (66), Expect = 4.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -2
Query: 464 PRCLTNPLTEAWDVLVIIMSAPARRKSRCVLITSWGWVWRYLAL 333
P C N L E D++ ++S+P RR+ + + + G++ + L L
Sbjct: 236 PTCELNKLEEIADLVTSVLSSPIRREKLALALENEGYIKKLLQL 279
>BC065037-1|AAH65037.1| 531|Homo sapiens cell division cycle 73,
Paf1/RNA polymerase II complex component, homolog (S. c
protein.
Length = 531
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 449 NPLTEAWDVLVIIMSAPARRKSRCVLITSWGWVWRYLALHR 327
+P + WDV V+ +S R R V + W + RY+ H+
Sbjct: 486 DPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHK 526
>BC014351-1|AAH14351.2| 409|Homo sapiens CDC73 protein protein.
Length = 409
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 449 NPLTEAWDVLVIIMSAPARRKSRCVLITSWGWVWRYLALHR 327
+P + WDV V+ +S R R V + W + RY+ H+
Sbjct: 364 DPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHK 404
>AL390863-1|CAH71589.1| 531|Homo sapiens cell division cycle 73,
Paf1/RNA polymerase II complex component, homolog (S. c
protein.
Length = 531
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 449 NPLTEAWDVLVIIMSAPARRKSRCVLITSWGWVWRYLALHR 327
+P + WDV V+ +S R R V + W + RY+ H+
Sbjct: 486 DPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHK 526
>AL139133-1|CAH71049.1| 531|Homo sapiens cell division cycle 73,
Paf1/RNA polymerase II complex component, homolog (S. c
protein.
Length = 531
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 449 NPLTEAWDVLVIIMSAPARRKSRCVLITSWGWVWRYLALHR 327
+P + WDV V+ +S R R V + W + RY+ H+
Sbjct: 486 DPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHK 526
>AK026969-1|BAB15608.1| 355|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23316 fis, clone HEP12031. ).
Length = 355
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 449 NPLTEAWDVLVIIMSAPARRKSRCVLITSWGWVWRYLALHR 327
+P + WDV V+ +S R R V + W + RY+ H+
Sbjct: 310 DPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHK 350
>AF312865-1|AAG45339.1| 531|Homo sapiens C1orf28 protein.
Length = 531
Score = 29.9 bits (64), Expect = 8.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 449 NPLTEAWDVLVIIMSAPARRKSRCVLITSWGWVWRYLALHR 327
+P + WDV V+ +S R R V + W + RY+ H+
Sbjct: 486 DPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKHK 526
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,477,376
Number of Sequences: 237096
Number of extensions: 2138694
Number of successful extensions: 4660
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4660
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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