Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_B22
(474 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0072 - 486211-486254,486350-486524,486658-486852,487489-48... 84 6e-17
01_07_0344 - 42869465-42869502,42869597-42869771,42869923-428701... 84 6e-17
01_06_1320 + 36272716-36273339,36274222-36275762,36276349-362764... 83 1e-16
02_05_1240 + 35181983-35182615,35183025-35183856,35183936-351844... 82 2e-16
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 73 2e-13
09_04_0609 - 18929600-18929646,18929753-18929924,18930304-189304... 70 1e-12
12_02_0858 + 23740589-23743233,23743362-23743503,23744778-237449... 67 6e-12
04_01_0522 - 6865049-6865131,6865214-6865388,6865692-6865877,686... 58 3e-09
05_03_0525 + 15002846-15003048,15004814-15004937,15005458-150054... 48 4e-06
12_02_0380 - 18356210-18356329,18356415-18356673,18356754-183569... 46 2e-05
12_02_0408 + 18659494-18660362,18660472-18660634,18660976-186611... 34 0.051
11_06_0189 - 21039217-21039348,21039480-21039738,21039841-210400... 34 0.051
09_02_0124 - 4546722-4547107,4547677-4547854,4548027-4548215,454... 31 0.36
03_01_0648 - 4749150-4749275,4749902-4749986,4750761-4750861,475... 31 0.36
09_03_0097 + 12335425-12336197,12336438-12336618,12337409-123375... 31 0.47
04_03_0139 + 11727207-11727359,11727534-11727674,11728607-11728804 30 0.83
05_07_0247 + 28643862-28644310,28645151-28645207,28645644-286489... 30 1.1
04_01_0350 - 4610444-4610668,4612181-4612969 28 3.3
10_01_0196 + 2142132-2142416,2142882-2143574 27 5.8
01_06_0216 + 27618116-27618548,27618960-27619042,27619169-276192... 27 5.8
10_01_0197 + 2148109-2149551 27 7.7
03_06_0135 + 31928838-31929698,31929783-31929932,31930795-319310... 27 7.7
>05_01_0072 - 486211-486254,486350-486524,486658-486852,487489-487599,
487693-487905,488432-488539,488621-488762,489157-490418,
490460-490480,490842-491228
Length = 885
Score = 83.8 bits (198), Expect = 6e-17
Identities = 37/76 (48%), Positives = 56/76 (73%)
Frame = +2
Query: 32 ERALLIDELCGFNDNREFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGS 211
ER +LI E+ G + E L VMMKDQ+ANYVVQK+++ + QR+ ++ +I+ H+ +
Sbjct: 794 ERQILISEMLGSTNESEH---LEVMMKDQFANYVVQKVLETCDDQQREAILTRIKAHLNT 850
Query: 212 LRKYTYGKHIIAKLEK 259
L+KYTYGKHI+A++EK
Sbjct: 851 LKKYTYGKHIVARVEK 866
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +2
Query: 80 EFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKLEK 259
E ++ ++ +DQY NYVVQ +++ +P +R ++ K+ + + + + ++I K
Sbjct: 729 EILQSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLA 788
Query: 260 F 262
F
Sbjct: 789 F 789
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
+M D + NYVVQK + PTQ K L ++ V +L YG +I K
Sbjct: 592 LMTDVFGNYVVQKFFEHGSPTQIKELADQLIGRVLALSLQMYGCRVIQK 640
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 53 ELCGFNDNREFFSAL--HVM--MKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRK 220
E+ G + + + L HVM ++DQ N+V+QK I+ + ++ V L
Sbjct: 643 EVVGLDQQTKMVAELDGHVMRCVRDQNGNHVIQKCIECIPQHAIQFIVSTFYGQVVMLST 702
Query: 221 YTYGKHIIAKL 253
+ YG +I ++
Sbjct: 703 HPYGCRVIQRV 713
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/55 (21%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 83 FFSALHVMMKDQYANYVVQKMIDVAE-PTQRKVLMHKIRPHVGSLRKYTYGKHII 244
F+ + ++ Y V+Q++++ + PT ++++M +I V L + YG +++
Sbjct: 693 FYGQVVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEILQSVCLLAQDQYGNYVV 747
>01_07_0344 - 42869465-42869502,42869597-42869771,42869923-42870117,
42870678-42870788,42870899-42871111,42871551-42871658,
42871732-42871873,42872150-42873449,42874032-42874085,
42874491-42874923
Length = 922
Score = 83.8 bits (198), Expect = 6e-17
Identities = 37/76 (48%), Positives = 58/76 (76%)
Frame = +2
Query: 32 ERALLIDELCGFNDNREFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGS 211
ER +LI E+ G ++ E L VMMKDQ+ANYVVQK+++ + QR++++ +I+ H+ +
Sbjct: 833 ERQVLIGEMLGSSNESEH---LEVMMKDQFANYVVQKVLETCDDQQREMILTRIKAHLNT 889
Query: 212 LRKYTYGKHIIAKLEK 259
L+KYTYGKHI+A++EK
Sbjct: 890 LKKYTYGKHIVARVEK 905
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +2
Query: 80 EFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKLEK 259
E ++ ++ DQY NYVVQ +++ +P +R ++ K+ + + + + ++I K
Sbjct: 768 EILQSVCLLATDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLA 827
Query: 260 F 262
F
Sbjct: 828 F 828
Score = 31.5 bits (68), Expect = 0.36
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
+M D + NYVVQK + Q K L ++ V +L YG +I K
Sbjct: 631 LMTDVFGNYVVQKFFEHGSSAQIKELADQLIGRVLALSLQMYGCRVIQK 679
>01_06_1320 + 36272716-36273339,36274222-36275762,36276349-36276490,
36276622-36276729,36276814-36277026,36277113-36277223,
36278056-36278250,36278874-36279048,36279189-36279226
Length = 1048
Score = 83.0 bits (196), Expect = 1e-16
Identities = 35/76 (46%), Positives = 56/76 (73%)
Frame = +2
Query: 32 ERALLIDELCGFNDNREFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGS 211
ER +LI+E+ G D E L MMKDQ+ NYVVQK+++ + QR++++ +++ H+ +
Sbjct: 959 EREVLINEMLGTTDENE---PLQAMMKDQFGNYVVQKVLETCDDQQRELILSRVKVHLSA 1015
Query: 212 LRKYTYGKHIIAKLEK 259
L+KYTYGKHI+A++EK
Sbjct: 1016 LKKYTYGKHIVARVEK 1031
Score = 40.3 bits (90), Expect = 8e-04
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +2
Query: 80 EFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKLEK 259
E ++ ++ +DQY NYVVQ +++ +P +R V++ K+ + + + + +++ K
Sbjct: 894 EILQSVCMLAQDQYGNYVVQHVLEHGKPHERSVIIEKLAGQIIQMSQQKFASNVVEKCLT 953
Query: 260 F 262
F
Sbjct: 954 F 954
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
+M D + NYVVQK + QR+ L ++ HV +L YG +I K
Sbjct: 757 LMTDVFGNYVVQKFFEHGSAAQRRELADQLFGHVLALSLQMYGCRVIQK 805
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +2
Query: 80 EFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
+ F + + Y V+QK I+V + Q+ ++ ++ H+ + G H+I K
Sbjct: 785 QLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTELDGHIMRCVRDQNGNHVIQK 841
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 98 HVM--MKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKL 253
H+M ++DQ N+V+QK I+ + ++ V L + YG +I ++
Sbjct: 825 HIMRCVRDQNGNHVIQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRV 878
>02_05_1240 + 35181983-35182615,35183025-35183856,35183936-35184497,
35184581-35184722,35184832-35184939,35185055-35185267,
35185355-35185465,35185684-35185878,35186094-35186268,
35186379-35186413
Length = 1001
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/76 (46%), Positives = 56/76 (73%)
Frame = +2
Query: 32 ERALLIDELCGFNDNREFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGS 211
ER +LI+E+ G D E L MMKDQ+ANYVVQK+++ + R++++ +I+ H+ +
Sbjct: 913 ERQILINEMLGTTDENE---PLQAMMKDQFANYVVQKVLETCDDQNRELILSRIKVHLNA 969
Query: 212 LRKYTYGKHIIAKLEK 259
L++YTYGKHI+A++EK
Sbjct: 970 LKRYTYGKHIVARVEK 985
Score = 35.5 bits (78), Expect = 0.022
Identities = 12/61 (19%), Positives = 32/61 (52%)
Frame = +2
Query: 80 EFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKLEK 259
E ++ ++ DQY NYV+Q ++ +P +R ++ ++ + + + + +++ K
Sbjct: 848 EIMQSVVLLTLDQYGNYVIQHVLQHGKPDERSAIIKQLAGQIVKMSQQKFASNVVEKCLS 907
Query: 260 F 262
F
Sbjct: 908 F 908
Score = 35.1 bits (77), Expect = 0.029
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 80 EFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
E +M D + NYV+QK + Q+K L ++ +V L YG +I K
Sbjct: 703 EILPQARTLMTDVFGNYVIQKFFEYGTEPQKKQLASLLKGYVLQLSLQMYGCRVIQK 759
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 107 MKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKL 253
++DQ N+V+QK I+ + + ++ HV L + YG +I ++
Sbjct: 784 VRDQNGNHVIQKCIECIPQERIRFIISAFYGHVVELSTHPYGCRVIQRV 832
>08_02_1277 + 25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/75 (46%), Positives = 49/75 (65%)
Frame = +2
Query: 17 HATRNERALLIDELCGFNDNREFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIR 196
H ER LLI E+ + + A MMKDQYANYVVQK+++ QR++L+ +++
Sbjct: 1711 HGDMTERDLLIREIVKQTEGNDNLLA---MMKDQYANYVVQKILETCNEQQRELLLSRVK 1767
Query: 197 PHVGSLRKYTYGKHI 241
H+ +LRKYTYGKHI
Sbjct: 1768 GHLQALRKYTYGKHI 1782
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
+M D + NYV+QK + P QR+ L K+ HV L YG +I K
Sbjct: 1514 LMTDVFGNYVIQKFFEHGTPEQRRDLATKLVGHVLPLSLQMYGCRVIQK 1562
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +2
Query: 80 EFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
E + V+ +DQY NYV Q +++ +R ++ K+ V ++ + + ++I K
Sbjct: 1651 EILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEK 1707
Score = 30.7 bits (66), Expect = 0.63
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 77 REFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKL 253
RE + ++DQ N+V+QK I+ ++ R V SL + YG +I ++
Sbjct: 1577 RELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRV 1635
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/46 (21%), Positives = 24/46 (52%)
Frame = +2
Query: 113 DQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
DQ+ + +Q+ ++ ++ + ++ PH SL +G ++I K
Sbjct: 1481 DQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQK 1526
>09_04_0609 - 18929600-18929646,18929753-18929924,18930304-18930498,
18930691-18930801,18930885-18931097,18931643-18931720,
18931894-18932001,18932175-18932316,18932413-18933761,
18934492-18935121
Length = 1014
Score = 69.7 bits (163), Expect = 1e-12
Identities = 32/81 (39%), Positives = 51/81 (62%)
Frame = +2
Query: 17 HATRNERALLIDELCGFNDNREFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIR 196
H ER LL+ E+ + + L V+MKDQYANYVVQKM+ +++L+ +++
Sbjct: 918 HGGSAERELLVKEILKQTEGNNY---LLVIMKDQYANYVVQKMLTTCNEQHKEILLSRVK 974
Query: 197 PHVGSLRKYTYGKHIIAKLEK 259
H+ L+KYTY KHI++ +E+
Sbjct: 975 IHLPLLKKYTYAKHIVSLVER 995
Score = 48.8 bits (111), Expect = 2e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKLEKFFM 268
+M D + NYV+QK + P Q++ + +K+ HV SL YG +I KL K+++
Sbjct: 695 LMTDVFGNYVIQKFFEKGSPQQKREIANKLAGHVFSLSLQMYGCRVIQKLAKYYL 749
Score = 31.9 bits (69), Expect = 0.27
Identities = 13/57 (22%), Positives = 30/57 (52%)
Frame = +2
Query: 80 EFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
E + ++ +DQY NYVVQ +++ +R ++ K+ V + + + ++I +
Sbjct: 858 EILQSACILAQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASNVIER 914
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 98 HVM--MKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKL 253
HV+ + DQ N+V+QK I+ L+ + V L +TYG +I ++
Sbjct: 789 HVLRCVHDQNGNHVIQKCIECIPLEHIGFLVSSFQCQVAKLSMHTYGCRVIQRI 842
>12_02_0858 + 23740589-23743233,23743362-23743503,23744778-23744990,
23745083-23745190,23745378-23745587,23745881-23746055,
23746197-23746264
Length = 1186
Score = 67.3 bits (157), Expect = 6e-12
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Frame = +2
Query: 29 NERALLIDELCGFND--NREFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPH 202
+E+ +I+E+ G D AL VM+ DQYANYVVQK+I+ + QRK+++ ++R H
Sbjct: 1081 DEKQKIINEVIGTTDLVRSGETEALVVMVNDQYANYVVQKVIETCDEWQRKLILRRLRAH 1140
Query: 203 VGSLRKYTYGKHIIAKLEK 259
L TY KH++A+L++
Sbjct: 1141 HSLLHDCTYAKHVVARLDR 1159
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 80 EFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
E ++ M KDQYANYVVQ ++ + R ++ K V ++ K + ++I K
Sbjct: 1017 EIIEEVYYMAKDQYANYVVQNILQHGKALVRSAIIKKFIGRVVAMSKQKFASNVIEK 1073
Score = 30.3 bits (65), Expect = 0.83
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 77 REFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKLE 256
+E S + + D AN+VVQK I+ P + + + V L + YG +I ++
Sbjct: 944 KELNSNIMKCIHDPNANHVVQKCIEHVPPRFIQFFVESMYGRVVELSVHPYGCRVIQRIL 1003
Query: 257 KFF 265
++F
Sbjct: 1004 EYF 1006
>04_01_0522 -
6865049-6865131,6865214-6865388,6865692-6865877,
6866489-6866599,6866678-6866890,6867446-6867553,
6867632-6867773,6867855-6868951,6871287-6871559
Length = 795
Score = 58.4 bits (135), Expect = 3e-09
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKLEKFFM 268
+MKDQ+ NYVVQ+++ + V++ I+ H+ L+ YT+GKHI+A++EK +
Sbjct: 712 LMKDQFGNYVVQRILQTCDDKFLVVILSSIKMHLNELKNYTFGKHIVARVEKLII 766
Score = 36.7 bits (81), Expect = 0.010
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKLEKF 262
+ +D++ NYVVQ +++ P +R ++ K+ V +L + Y +++ K F
Sbjct: 637 LTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSF 689
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 113 DQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKL 253
D + NYV+QK + A +Q L ++R H L YG ++ K+
Sbjct: 495 DVFGNYVIQKFFEFATESQLSQLADQLRGHFLQLSFQMYGCRVVQKV 541
>05_03_0525 + 15002846-15003048,15004814-15004937,15005458-15005481,
15005995-15006779,15006839-15006873,15007108-15007601,
15007951-15008452,15008725-15008867,15009523-15009576,
15010255-15010362,15010529-15010705,15011169-15011186,
15011561-15011938,15012125-15012310,15012356-15013205,
15013362-15013402,15013491-15013868,15014195-15014236,
15014528-15014678,15015621-15015670
Length = 1580
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +2
Query: 92 ALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKLEK 259
AL VM+ DQYANYVVQK+I+ + R + H+ LR TY KH++A++E+
Sbjct: 1512 ALMVMVNDQYANYVVQKVIETCDECLR--MRHR------QLRNCTYAKHVVARIER 1559
Score = 32.3 bits (70), Expect = 0.21
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 80 EFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
E ++ M K+QYAN VVQ ++ + R +++ + V ++ K Y ++ K
Sbjct: 805 EIIEDVYYMTKEQYANNVVQHILQHGKALVRSLIIKRFIGKVVTMSKQKYASNVFEK 861
>12_02_0380 -
18356210-18356329,18356415-18356673,18356754-18356917,
18357235-18357397,18357465-18359020
Length = 753
Score = 46.0 bits (104), Expect = 2e-05
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 95 LHVMMKDQYANYVVQKMIDVAEPTQ-RKVLMHKIRPHVGSLRKYTYGKHIIAK 250
LH+++ D Y NYV+Q + E R VL+ IRPHV +LR +GK I++K
Sbjct: 694 LHILI-DPYGNYVIQTALKECEDAAVRAVLIGAIRPHVAALRNNMFGKRILSK 745
Score = 32.3 bits (70), Expect = 0.21
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKLEK 259
+ + QY NYVVQ ++D+ ++ K+ H GSL +++ K K
Sbjct: 622 LSEHQYGNYVVQYILDLHISWATDEILDKLEDHFGSLSMQKSSSNVVEKCLK 673
Score = 31.1 bits (67), Expect = 0.47
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKH 238
++ D + NY+VQK+++ Q+ ++++I G L K++ H
Sbjct: 474 LVVDPFGNYLVQKLLEECNHDQKMHIVYEITKRPGQLIKFSCDMH 518
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +2
Query: 80 EFFSALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKL 253
E +H++ KDQ +Q++ K + I H+G L +G +++ KL
Sbjct: 430 EVVGKIHLLAKDQNGCRFLQRIFTEGTSENVKKVFDGIIEHIGELVVDPFGNYLVQKL 487
>12_02_0408 +
18659494-18660362,18660472-18660634,18660976-18661139,
18661253-18661511,18661605-18661712
Length = 520
Score = 34.3 bits (75), Expect = 0.051
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKLEKFFMKA 274
+ +D Y NYVVQ +ID+ PT L + + L + +++ K K F +A
Sbjct: 393 LAQDAYGNYVVQYVIDLKVPTANASLTKQFQGRYIHLSMQKFSSNVVEKCLKVFKEA 449
Score = 34.3 bits (75), Expect = 0.051
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
+++ +ANYV+ I ++ + L + IRPHV LR Y K I ++
Sbjct: 467 LLQHPFANYVIYSAIQNSKGSLHSALTNAIRPHVELLRTSPYCKRIYSR 515
>11_06_0189 -
21039217-21039348,21039480-21039738,21039841-21040004,
21040371-21040533,21040615-21042137
Length = 746
Score = 34.3 bits (75), Expect = 0.051
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 89 SALHVMMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
S L +M D + N+V+Q + + + IRPH +L+ Y K +++K
Sbjct: 680 SKLPHIMADPFGNFVIQTALKECKGELHSSFVEAIRPHAPALQNDVYAKRVLSK 733
Score = 33.1 bits (72), Expect = 0.12
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHII 244
+ +DQY NYV+Q ++++ ++ +++ H G L G H++
Sbjct: 611 LSEDQYGNYVIQFVVNLGIEWATSKIVKELKGHFGYLSMQKCGSHVV 657
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHII 244
+ KDQ+ ++QK I+ + Q+ L+ KI SL + YG ++I
Sbjct: 575 LAKDQHGCCIIQKCIEHSNDEQKYNLLCKITSSALSLSEDQYGNYVI 621
>09_02_0124 -
4546722-4547107,4547677-4547854,4548027-4548215,
4548602-4548712,4549024-4549071,4549825-4549966,
4550349-4550695
Length = 466
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +2
Query: 101 VMMKDQYANYVVQKMIDVAEPT-QRKVLMHKIRPHVGSLRKYTYGKHIIAKLE 256
++M +++ NYV+QKM++ A +++ + + L Y +G+H++A L+
Sbjct: 280 MVMVNEHGNYVIQKMLETAAAEWVVDLIVIVVNRNFFRLIHYVHGRHVLAHLQ 332
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAK 250
++ DQ+ NYVVQ +++ + R +++ +++ + L YG +++ K
Sbjct: 205 LVVDQFGNYVVQYVVEHGGESVRAMIVMRLKGLMVMLSCQKYGSNVMEK 253
>03_01_0648 -
4749150-4749275,4749902-4749986,4750761-4750861,
4750933-4751191,4751382-4751434,4752828-4752990,
4753181-4754616
Length = 740
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKLEK 259
+M + +ANY+VQK++DV + QR ++ + L + + H ++K
Sbjct: 434 LMANSFANYLVQKLLDVCDEEQRLRIIAVLTEDPVKLLRVSLNSHGTRSIQK 485
Score = 31.1 bits (67), Expect = 0.47
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 80 EFFSALHV--MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKL 253
E SA H +++D YANYV+ + R L++ I PH ++R K I L
Sbjct: 609 ELISASHFEQLLQDPYANYVIHTALVQTRGHLRSALVNAILPHEEAIRTNPCCKRISKVL 668
Query: 254 EK 259
+
Sbjct: 669 SR 670
>09_03_0097 +
12335425-12336197,12336438-12336618,12337409-12337572,
12338132-12338393,12338488-12338604
Length = 498
Score = 31.1 bits (67), Expect = 0.47
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = +2
Query: 104 MMKDQYANYVVQKMIDVAEPTQRKVLMHKIRPHVGSLRKYTYGKHIIAKLEKFF 265
+ K + NY+VQ +++ P +++ + H L + Y ++ K K F
Sbjct: 367 LAKHRSGNYIVQDVLEFGHPFHLEIITSCFKTHYVDLARQKYSSRVVEKCLKVF 420
>04_03_0139 + 11727207-11727359,11727534-11727674,11728607-11728804
Length = 163
Score = 30.3 bits (65), Expect = 0.83
Identities = 16/78 (20%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +2
Query: 11 VTHATRNERALLIDELCGFNDNREFFSALHVMMKDQYANYVVQKMID-VAEPTQRKVLMH 187
+T + ++R ++ ++ G +++ + +MM D++ NYV+QKM++ +A+ +++
Sbjct: 27 LTFGSIHDRLVIAADIAGAGEDQ-----ILMMMMDEHGNYVIQKMLETIADEWVVDLIVT 81
Query: 188 KIRPHVGSLRKYTYGKHI 241
+ + L +G+H+
Sbjct: 82 VVNRNFFRLIHNIHGRHV 99
>05_07_0247 +
28643862-28644310,28645151-28645207,28645644-28648950,
28649069-28649144,28649356-28649426,28649524-28649589,
28649677-28649766,28649874-28650050,28650513-28650548
Length = 1442
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 424 NHKYSHNV*EAGGGTPAPSHQPTRSADVN 338
NHK S+++ + GTP+P + R +DVN
Sbjct: 304 NHKNSNSISTSSNGTPSPDYAFLRVSDVN 332
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 9 ASPTRRATSAPCSSTNSAASMTIVNFSAPST 101
A+P AT+ PC + NS +M ++ F S+
Sbjct: 11 ATPAAAATAVPCVTLNSGHAMPVLGFGTGSS 41
>10_01_0196 + 2142132-2142416,2142882-2143574
Length = 325
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 469 LARFRSVRPLYLQMYNH-KYSHNV*EAGGGTPAPSHQPTRSADVNTLRRLL 320
++RF +VRP++L +H +YS+ G+ P P + N L LL
Sbjct: 130 ISRFGTVRPIHLNSLSHEEYSYLFKVLAFGSTNPEEHPQMVSIANELSVLL 180
>01_06_0216 +
27618116-27618548,27618960-27619042,27619169-27619225,
27619255-27619407,27619777-27619872,27620103-27620183,
27620184-27620254,27620343-27620385,27620502-27620582,
27620684-27620743,27621018-27621083,27621358-27621455,
27621794-27621842,27621933-27621977,27622845-27623369
Length = 646
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -3
Query: 385 GTPAPSHQPTRSADVNTLRRLLQHRVGGRRPDRA*LWCFHKELLQFRDYVLP 230
G+ AP+ QP + ++ R GGRR R+ + HKE+L F D++ P
Sbjct: 112 GSLAPAEQPAQGSERAWFR-------GGRR-FRSPMLQLHKEILDFCDFISP 155
>10_01_0197 + 2148109-2149551
Length = 480
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -3
Query: 469 LARFRSVRPLYLQMYNH-KYSHNV*EAGGGTPAPSHQPTRSADVNTLRRLL 320
++RF +VRP++L +H +YS+ G+ P P + N L LL
Sbjct: 285 ISRFGTVRPIHLNSLSHEEYSYLFKVLAFGSTNPEEHPQLVSIANELTVLL 335
>03_06_0135 +
31928838-31929698,31929783-31929932,31930795-31931065,
31931157-31931249,31931442-31931616,31931715-31931960,
31932100-31932294,31932604-31932802
Length = 729
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 82 IFQRPPRNDEGPVRELRGP 138
IFQRPP NDE +R + P
Sbjct: 486 IFQRPPSNDEYDLRAKKDP 504
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,421,958
Number of Sequences: 37544
Number of extensions: 240243
Number of successful extensions: 778
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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