Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_B19
         (238 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   0.67 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   2.7  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   2.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   3.6  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           20   4.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    19   6.2  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 0.67
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 204 KQVKSNHSFCINITIFVRYLVTRQITILT 118
           KQVK  H   +N T     LVT  + +L+
Sbjct: 164 KQVKIPHDIAVNTTTEKGALVTLSVQLLS 192


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 2.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 203 SKSNPTIAFV*ISPSSLG 150
           S S+P+  F  +SP+SLG
Sbjct: 92  SPSSPSSFFSSVSPTSLG 109


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 20.6 bits (41), Expect = 2.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 130 NLTCHKIPNED 162
           N TCH + N+D
Sbjct: 379 NYTCHAVRNQD 389


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 5   TNRLQNELCPSTLQQLFQL 61
           TNR  N    ST+Q L +L
Sbjct: 728 TNRQVNSAVKSTIQSLMKL 746


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = +1

Query: 40  SPTVVSVKYASKSGTIFVA*FYRNPLRQYCNLTCHKIPNEDG 165
           S T +  KY   S  IFV   YR  +  + +     +P   G
Sbjct: 8   SGTPMGAKYLMDSDVIFVTINYRLGILGFLSTEDEVVPGNMG 49


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 233 CDCHMYWLLG 204
           C+C M WL G
Sbjct: 684 CNCSMDWLPG 693


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,284
Number of Sequences: 438
Number of extensions: 1243
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3898467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)