Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_B18
(611 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ... 55 7e-08
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro... 55 7e-08
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA... 55 7e-08
AY118462-1|AAM49831.1| 625|Drosophila melanogaster GM01690p pro... 31 0.93
AE014134-3349|AAF53970.1| 625|Drosophila melanogaster CG9247-PA... 31 0.93
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P... 31 1.2
BT021960-1|AAX94781.1| 1200|Drosophila melanogaster LD12755p pro... 29 6.5
AE014297-1880|AAF55083.1| 1200|Drosophila melanogaster CG7832-PA... 29 6.5
AE014297-1024|AAF54439.1| 1080|Drosophila melanogaster CG16908-P... 29 6.5
BT029947-1|ABM92821.1| 401|Drosophila melanogaster IP16983p pro... 28 8.6
AY051713-1|AAK93137.1| 610|Drosophila melanogaster LD24841p pro... 28 8.6
AE013599-1488|AAF58509.1| 610|Drosophila melanogaster CG8831-PA... 28 8.6
>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
acid-bindingglycoprotein protein.
Length = 3351
Score = 55.2 bits (127), Expect = 7e-08
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Frame = +2
Query: 26 HAIGDVYQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLA 205
H GD + +K+PN + D+V + + +L+ P I + ++L+S+ +D+++ +
Sbjct: 3044 HDFGDEFTVKLPNNKVDVVFVVDINVT-PGVLSNLIAPAINDIRESLRSRGFSDVQVGVI 3102
Query: 206 GHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKY---EKNVIDFMDT 376
YP L +D K+++ ++ +K+ CD + EK ++D ++
Sbjct: 3103 VFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVEQIITEKRILDIYNS 3158
Query: 377 LK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVL 469
LK I G++ EK+ LD PFRAGA K ++
Sbjct: 3159 LKEIVKGIAP-QADEKAFQLALDYPFRAGAAKSII 3192
>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p protein.
Length = 1074
Score = 55.2 bits (127), Expect = 7e-08
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Frame = +2
Query: 26 HAIGDVYQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLA 205
H GD + +K+PN + D+V + + +L+ P I + ++L+S+ +D+++ +
Sbjct: 767 HDFGDEFTVKLPNNKVDVVFVVDINVT-PGVLSNLIAPAINDIRESLRSRGFSDVQVGVI 825
Query: 206 GHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKY---EKNVIDFMDT 376
YP L +D K+++ ++ +K+ CD + EK ++D ++
Sbjct: 826 VFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVEQIITEKRILDIYNS 881
Query: 377 LK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVL 469
LK I G++ EK+ LD PFRAGA K ++
Sbjct: 882 LKEIVKGIAP-QADEKAFQLALDYPFRAGAAKSII 915
>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
protein.
Length = 3351
Score = 55.2 bits (127), Expect = 7e-08
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Frame = +2
Query: 26 HAIGDVYQLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQITDIKIYLA 205
H GD + +K+PN + D+V + + +L+ P I + ++L+S+ +D+++ +
Sbjct: 3044 HDFGDEFTVKLPNNKVDVVFVVDINVT-PGVLSNLIAPAINDIRESLRSRGFSDVQVGVI 3102
Query: 206 GHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKY---EKNVIDFMDT 376
YP L +D K+++ ++ +K+ CD + EK ++D ++
Sbjct: 3103 VFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVEQIITEKRILDIYNS 3158
Query: 377 LK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVL 469
LK I G++ EK+ LD PFRAGA K ++
Sbjct: 3159 LKEIVKGIAP-QADEKAFQLALDYPFRAGAAKSII 3192
>AY118462-1|AAM49831.1| 625|Drosophila melanogaster GM01690p
protein.
Length = 625
Score = 31.5 bits (68), Expect = 0.93
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Frame = +2
Query: 122 KDLVMPLITQLVDNLKSKQITDIKIYL-AGH---TSKYPYPILYDTDLKLKSSKLHFDDK 289
+DL++P + +L+DN K++T I L H + +P++ L L L D
Sbjct: 170 RDLLLPKLRELLDNGLYKEVTQWSISLQLTHEFDMLELAFPLIAIEKLPLAEEYL---DH 226
Query: 290 ERYERMPFVKTGCDTFDKYEKNVIDFMDTLKIK---LGLSNIVLSEKSLLDLPFR 445
+R+PFVK D+ EK+V++ + L + L +S+ VLS + + + R
Sbjct: 227 ATQQRLPFVKF-LDSLLHKEKSVLELCEHLLDRYKNLKISHNVLSYRPMAKIVAR 280
>AE014134-3349|AAF53970.1| 625|Drosophila melanogaster CG9247-PA
protein.
Length = 625
Score = 31.5 bits (68), Expect = 0.93
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Frame = +2
Query: 122 KDLVMPLITQLVDNLKSKQITDIKIYL-AGH---TSKYPYPILYDTDLKLKSSKLHFDDK 289
+DL++P + +L+DN K++T I L H + +P++ L L L D
Sbjct: 170 RDLLLPKLRELLDNGLYKEVTQWSISLQLTHEFDMLELAFPLIAIEKLPLAEEYL---DH 226
Query: 290 ERYERMPFVKTGCDTFDKYEKNVIDFMDTLKIK---LGLSNIVLSEKSLLDLPFR 445
+R+PFVK D+ EK+V++ + L + L +S+ VLS + + + R
Sbjct: 227 ATQQRLPFVKF-LDSLLHKEKSVLELCEHLLDRYKNLKISHNVLSYRPMAKIVAR 280
>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
protein.
Length = 4129
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 459 LTAPARNGRSRSDFSLKTILDKPSFILSVSIKSITFFSYLSNVSHPVLTKGI 304
+TA GR+ DF+L +++KP+FI+ +SI + VS VL G+
Sbjct: 2002 ITATNSEGRAAVDFNLAVLVEKPTFIVQPESQSIHDY---RPVSTKVLVHGV 2050
>BT021960-1|AAX94781.1| 1200|Drosophila melanogaster LD12755p protein.
Length = 1200
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 50 LKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQL-VDNLKSKQITDIKIYLA 205
L VP + D + F+ Q Q + + P + L + N+K+++I+ I LA
Sbjct: 913 LLVPKLEVDSLFKFDADQQQNQQQQSTLDPSLLSLDIANIKAEEISQIVAQLA 965
>AE014297-1880|AAF55083.1| 1200|Drosophila melanogaster CG7832-PA
protein.
Length = 1200
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 50 LKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQL-VDNLKSKQITDIKIYLA 205
L VP + D + F+ Q Q + + P + L + N+K+++I+ I LA
Sbjct: 913 LLVPKLEVDSLFKFDADQQQNQQQQSTLDPSLLSLDIANIKAEEISQIVAQLA 965
>AE014297-1024|AAF54439.1| 1080|Drosophila melanogaster CG16908-PA
protein.
Length = 1080
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 2 HEADADKPHAIGDVY-QLKVPNKQADIVVSFETTQSNEQSYKDLVMPLITQLVDNLKSKQ 178
H D ++ DV QLK K A + S ET+Q+ Q YK L + L+ L D + Q
Sbjct: 943 HAKDFILKRSLSDVIPQLKQFLKTASLHSSTETSQAQTQEYK-LQLKLLKSLADFILGLQ 1001
Query: 179 I 181
I
Sbjct: 1002 I 1002
>BT029947-1|ABM92821.1| 401|Drosophila melanogaster IP16983p
protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 3 TRPTRTSLTPSETFINSKCQTSKQILSSPSK 95
TR TSLTP E + +K Q ++S+P++
Sbjct: 296 TRKVGTSLTPEEEALRTKLQNMLAVVSAPTQ 326
>AY051713-1|AAK93137.1| 610|Drosophila melanogaster LD24841p
protein.
Length = 610
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 3 TRPTRTSLTPSETFINSKCQTSKQILSSPSK 95
TR TSLTP E + +K Q ++S+P++
Sbjct: 505 TRKVGTSLTPEEEALRTKLQNMLAVVSAPTQ 535
>AE013599-1488|AAF58509.1| 610|Drosophila melanogaster CG8831-PA
protein.
Length = 610
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 3 TRPTRTSLTPSETFINSKCQTSKQILSSPSK 95
TR TSLTP E + +K Q ++S+P++
Sbjct: 505 TRKVGTSLTPEEEALRTKLQNMLAVVSAPTQ 535
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,333,459
Number of Sequences: 53049
Number of extensions: 473727
Number of successful extensions: 1220
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -