Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_B17
         (452 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ871036-1|ABI31650.1|  358|Homo sapiens P7 isoform c protein.         30   4.3  
DQ122860-1|AAZ32256.1|  340|Homo sapiens P7 isoform a protein.         30   4.3  
BC150308-1|AAI50309.1|  340|Homo sapiens solute carrier family 1...    30   4.3  
AY346324-1|AAQ84722.1|  340|Homo sapiens SBF-domain containing p...    30   4.3  
AK075364-1|BAC11571.1|  227|Homo sapiens protein ( Homo sapiens ...    30   4.3  
U81006-1|AAB38973.1|  663|Homo sapiens p76 protein.                    29   9.8  
BC130293-1|AAI30294.1|  663|Homo sapiens transmembrane 9 superfa...    29   9.8  
BC110656-1|AAI10657.1|  663|Homo sapiens transmembrane 9 superfa...    29   9.8  
AL139035-1|CAH71381.1|  663|Homo sapiens transmembrane 9 superfa...    29   9.8  

>DQ871036-1|ABI31650.1|  358|Homo sapiens P7 isoform c protein.
          Length = 358

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 291 LLVSYIPFCDDH*NSNINQSKFSLTL 214
           L++ Y  FCD   N NI+  KFSL L
Sbjct: 211 LMIIYTTFCDTFSNPNIDLDKFSLVL 236


>DQ122860-1|AAZ32256.1|  340|Homo sapiens P7 isoform a protein.
          Length = 340

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 291 LLVSYIPFCDDH*NSNINQSKFSLTL 214
           L++ Y  FCD   N NI+  KFSL L
Sbjct: 211 LMIIYTTFCDTFSNPNIDLDKFSLVL 236


>BC150308-1|AAI50309.1|  340|Homo sapiens solute carrier family 10
           (sodium/bile acid cotransporter family), member 7
           protein.
          Length = 340

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 291 LLVSYIPFCDDH*NSNINQSKFSLTL 214
           L++ Y  FCD   N NI+  KFSL L
Sbjct: 211 LMIIYTTFCDTFSNPNIDLDKFSLVL 236


>AY346324-1|AAQ84722.1|  340|Homo sapiens SBF-domain containing
           protein protein.
          Length = 340

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 291 LLVSYIPFCDDH*NSNINQSKFSLTL 214
           L++ Y  FCD   N NI+  KFSL L
Sbjct: 211 LMIIYTTFCDTFSNPNIDLDKFSLVL 236


>AK075364-1|BAC11571.1|  227|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0051 fis, clone NT2RP2000168. ).
          Length = 227

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 291 LLVSYIPFCDDH*NSNINQSKFSLTL 214
           L++ Y  FCD   N NI+  KFSL L
Sbjct: 98  LMIIYTTFCDTFSNPNIDLDKFSLVL 123


>U81006-1|AAB38973.1|  663|Homo sapiens p76 protein.
          Length = 663

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 249 NFNGHHKTVYMTLTSFLCPNLV*PLQFVDYFL*NSI 356
           +F G      + LTSFLCP +V    F D+F+ N I
Sbjct: 424 SFGGEKWKTNVLLTSFLCPGIV----FADFFIMNLI 455


>BC130293-1|AAI30294.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 249 NFNGHHKTVYMTLTSFLCPNLV*PLQFVDYFL*NSI 356
           +F G      + LTSFLCP +V    F D+F+ N I
Sbjct: 424 SFGGEKWKTNVLLTSFLCPGIV----FADFFIMNLI 455


>BC110656-1|AAI10657.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 249 NFNGHHKTVYMTLTSFLCPNLV*PLQFVDYFL*NSI 356
           +F G      + LTSFLCP +V    F D+F+ N I
Sbjct: 424 SFGGEKWKTNVLLTSFLCPGIV----FADFFIMNLI 455


>AL139035-1|CAH71381.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 249 NFNGHHKTVYMTLTSFLCPNLV*PLQFVDYFL*NSI 356
           +F G      + LTSFLCP +V    F D+F+ N I
Sbjct: 424 SFGGEKWKTNVLLTSFLCPGIV----FADFFIMNLI 455


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,544,368
Number of Sequences: 237096
Number of extensions: 1103653
Number of successful extensions: 1230
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)