Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_B11
(510 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 272 2e-74
SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyce... 217 8e-58
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 199 2e-52
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 197 7e-52
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 194 5e-51
SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6 |Schizosaccharom... 189 2e-49
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 27 1.6
SPBC1271.03c |||phosphoprotein phosphatase|Schizosaccharomyces p... 27 2.2
SPBC3D6.06c |||ribose-phosphate pyrophosphokinase |Schizosacchar... 26 2.9
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 26 3.8
SPAC8E11.01c ||SPAC959.01|beta-fructofuranosidase|Schizosaccharo... 25 5.0
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 25 5.0
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|... 25 5.0
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 25 6.6
SPAC1687.06c |rpl44|rpl28|60S ribosomal protein L28/L44|Schizosa... 25 6.6
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 25 8.7
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 25 8.7
SPAC1952.09c |||acetyl-CoA hydrolase|Schizosaccharomyces pombe|c... 25 8.7
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 25 8.7
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 25 8.7
SPAP14E8.04 |oma1||metallopeptidase Oma1 |Schizosaccharomyces po... 25 8.7
SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyce... 25 8.7
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 272 bits (668), Expect = 2e-74
Identities = 133/168 (79%), Positives = 148/168 (88%), Gaps = 1/168 (0%)
Frame = +3
Query: 9 AIACLLFGGSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSSA 188
AIACLLF GS+K LPDG+ RGDIN+LLLGDPGTAKSQ LKFVE+++PI VYTSGKGSSA
Sbjct: 343 AIACLLFSGSKKILPDGMRLRGDINVLLLGDPGTAKSQFLKFVERLAPIAVYTSGKGSSA 402
Query: 189 AGLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAK 368
AGLTAS+ RD +R F +EGGAMVLADGG+VCIDEFDKMR++DRVAIHEAMEQQTISIAK
Sbjct: 403 AGLTASIQRDSVTREFYLEGGAMVLADGGIVCIDEFDKMRDEDRVAIHEAMEQQTISIAK 462
Query: 369 AGITTTLNSRCSVLAAANSVFGRWDDTKA-DDNIDFMPTILSRFDMIF 509
AGITT LNSR SVLAAAN +FGR+DD K +NIDF TILSRFDMIF
Sbjct: 463 AGITTILNSRTSVLAAANPIFGRYDDMKTPGENIDFQSTILSRFDMIF 510
>SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 760
Score = 217 bits (530), Expect = 8e-58
Identities = 106/168 (63%), Positives = 130/168 (77%), Gaps = 1/168 (0%)
Frame = +3
Query: 9 AIACLLFGGSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSSA 188
A+ LL GG K L DG+ RGDINI L GDPG AKSQLLK++ KV+P GVYT+G+GSS
Sbjct: 374 ALLLLLVGGVTKELGDGMRIRGDINICLTGDPGVAKSQLLKYISKVAPRGVYTTGRGSSG 433
Query: 189 AGLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAK 368
GLTA+V+RDP + V+EGGA+VLAD G+ CIDEFDKM E DR AIHE MEQQTISI+K
Sbjct: 434 VGLTAAVMRDPVTDEMVLEGGALVLADNGICCIDEFDKMDESDRTAIHEVMEQQTISISK 493
Query: 369 AGITTTLNSRCSVLAAANSVFGRWDDTKAD-DNIDFMPTILSRFDMIF 509
AGITTTLN+R S+LAAAN ++GR++ A NI+ +LSRFD++F
Sbjct: 494 AGITTTLNARTSILAAANPLYGRYNPKVAPIHNINLPAALLSRFDILF 541
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 199 bits (485), Expect = 2e-52
Identities = 99/168 (58%), Positives = 126/168 (75%), Gaps = 1/168 (0%)
Frame = +3
Query: 9 AIACLLFGGSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSSA 188
AI LL GG+ K L +G RGDINIL++GDP TAKSQLL+FV +P+ + T+G+GSS
Sbjct: 327 AILLLLLGGTEKNLTNGTHIRGDINILMVGDPSTAKSQLLRFVLNTAPLAIATTGRGSSG 386
Query: 189 AGLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAK 368
GLTA+V D + +E GAMVLAD GVVCIDEFDKM + DRVAIHE MEQQT++IAK
Sbjct: 387 VGLTAAVTTDKETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRVAIHEVMEQQTVTIAK 446
Query: 369 AGITTTLNSRCSVLAAANSVFGRWDDTK-ADDNIDFMPTILSRFDMIF 509
AGI T+LN+RCSV+AAAN ++G++D K NI ++LSRFD++F
Sbjct: 447 AGIHTSLNARCSVIAAANPIYGQYDIRKDPHQNIALPDSMLSRFDLLF 494
>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 197 bits (481), Expect = 7e-52
Identities = 93/165 (56%), Positives = 124/165 (75%), Gaps = 3/165 (1%)
Frame = +3
Query: 24 LFGGSRKRLPDGLTRR--GDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSSAAGL 197
LFGG+ K G + R GDINIL+ GDP T+KSQ+LK+V K++P GVYTSGKGSSA GL
Sbjct: 519 LFGGTNKSFHKGASPRYRGDINILMCGDPSTSKSQILKYVHKIAPRGVYTSGKGSSAVGL 578
Query: 198 TASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGI 377
TA + RD ++ V+E GA+VL+DGG+ CIDEFDKM + R +HE MEQQT+++AKAGI
Sbjct: 579 TAYITRDQDTKQLVLESGALVLSDGGICCIDEFDKMSDATRSILHEVMEQQTVTVAKAGI 638
Query: 378 TTTLNSRCSVLAAANSVFGRWD-DTKADDNIDFMPTILSRFDMIF 509
TTLN+R S+LA+AN + +++ D NID PT+LSRFD+++
Sbjct: 639 ITTLNARTSILASANPIGSKYNPDLPVTKNIDLPPTLLSRFDLVY 683
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 194 bits (474), Expect = 5e-51
Identities = 96/167 (57%), Positives = 125/167 (74%), Gaps = 1/167 (0%)
Frame = +3
Query: 9 AIACLLFGGSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSSA 188
AIA LFGG K + RGDIN+LLLGDPGTAKSQ LK+VEK + V+ +G+G+SA
Sbjct: 505 AIAAALFGGVPKNINGKHKIRGDINVLLLGDPGTAKSQFLKYVEKTAHRAVFATGQGASA 564
Query: 189 AGLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAK 368
GLTASV +DP + + +EGGA+VLAD GV IDEFDKM + DR +IHEAMEQQ+ISI+K
Sbjct: 565 VGLTASVRKDPITNEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISK 624
Query: 369 AGITTTLNSRCSVLAAANSVFGRWDDT-KADDNIDFMPTILSRFDMI 506
AGI TTL +RC+++AAAN + GR++ T + N++ ILSRFD++
Sbjct: 625 AGIVTTLQARCTIIAAANPIGGRYNTTIPFNQNVELTEPILSRFDIL 671
>SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 892
Score = 189 bits (461), Expect = 2e-49
Identities = 93/163 (57%), Positives = 120/163 (73%), Gaps = 1/163 (0%)
Frame = +3
Query: 24 LFGGSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSSAAGLTA 203
L GG K P+G+ RGD+NI ++GDP T+KSQ LK+V P +YTSGK SSAAGLTA
Sbjct: 452 LMGGVHKLTPEGINLRGDLNICIVGDPSTSKSQFLKYVCNFLPRAIYTSGKASSAAGLTA 511
Query: 204 SVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITT 383
+V++D + +F +E GA++LAD G+ IDEFDKM D+VAIHEAMEQQTISIAKAGI
Sbjct: 512 AVVKDEETGDFTIEAGALMLADNGICAIDEFDKMDLSDQVAIHEAMEQQTISIAKAGIQA 571
Query: 384 TLNSRCSVLAAANSVFGRWD-DTKADDNIDFMPTILSRFDMIF 509
TLN+R S+LAAAN + GR++ T +NI+ I+SRFD+ F
Sbjct: 572 TLNARTSILAAANPIGGRYNRKTTLRNNINMSAPIMSRFDLFF 614
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 27.1 bits (57), Expect = 1.6
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = -2
Query: 509 EYHVESRQYSGHEIDVIVRLGVIPAAENRVSS 414
EY +E+ ++G + ++ + G++ AAE +V+S
Sbjct: 22 EYALEAINHAGVALGIVAKDGIVLAAEKKVTS 53
>SPBC1271.03c |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -1
Query: 162 TRLSEKLSLRTSTTEI*LYRDLRVIGY*YHHDGLNRPVIFSE 37
TR+ KL+ ++ Y++L + HHD +PV +S+
Sbjct: 105 TRVDMKLTKHQFDRKVQTYKNLDTVWEKIHHDSTGKPVSWSQ 146
>SPBC3D6.06c |||ribose-phosphate pyrophosphokinase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 341
Score = 26.2 bits (55), Expect = 2.9
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -2
Query: 371 GLSNRYGLLLHCLVYGDA---VVFSHFVKLIDTDNA 273
G S Y L+ HC++ GDA V S KLI T+ A
Sbjct: 263 GASKIYALVTHCVLSGDAIERVKLSCIDKLIVTNTA 298
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 25.8 bits (54), Expect = 3.8
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = -3
Query: 217 SLITEAVRPAALEPFPEVYTPIGETFSTNFNN*DLAVPG--SPSNRILISPRR--VKPS 53
+L TEA A FP++YT + F + N +++ S +I +S RR VKP+
Sbjct: 587 ALCTEAALNAVRRTFPQIYTS-SDKFLIDLNEISVSICDFVVASEKIAVSTRRSDVKPN 644
>SPAC8E11.01c
||SPAC959.01|beta-fructofuranosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 25.4 bits (53), Expect = 5.0
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +3
Query: 258 VLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSR 398
V GG++C+ + D+ + + S+AK+G+ LN+R
Sbjct: 459 VYLQGGIMCLTNAYYFKGDEPLQYYYLRVPTGASLAKSGMQPLLNNR 505
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.4 bits (53), Expect = 5.0
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = -2
Query: 314 VFSHFVKLIDTDNAAISKHHRSALHYEVTTSRIPNNRSSETGRTGTLPGSVHAYR 150
+F L+ TD+ A +KH +++L++ I + + G + G V+A R
Sbjct: 464 IFQVAEALVGTDSLAQAKHFQASLYHRPLDGFIISKVDTVGQLVGVMVGMVYAVR 518
>SPAC3A12.05c |taf2||TATA-binding protein associated factor
Taf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1174
Score = 25.4 bits (53), Expect = 5.0
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = -2
Query: 332 VYGDAVVFSHFVKL----IDTDNAAISKHHRSALHYE 234
V GD FS+ L ID N+ +++HH+ L YE
Sbjct: 60 VNGDLTKFSYSDALKKLRIDEPNSTVNQHHQLNLQYE 96
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 25.0 bits (52), Expect = 6.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3
Query: 84 ILLLGDPGTAKSQLLKFV 137
ILL G PGT KS L K V
Sbjct: 165 ILLYGPPGTGKSYLAKAV 182
>SPAC1687.06c |rpl44|rpl28|60S ribosomal protein
L28/L44|Schizosaccharomyces pombe|chr 1|||Manual
Length = 134
Score = 25.0 bits (52), Expect = 6.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 490 DNIVGMKSMLSSALVSSQRPKTELA 416
D++V + +SA++SSQRPK +A
Sbjct: 110 DDLVKVSVARASAILSSQRPKKTVA 134
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 24.6 bits (51), Expect = 8.7
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +3
Query: 366 KAGITTTLNSRCSVLAAANSVFGRWDDTKADD 461
K+ +T +L + +++AA + R+ DT+AD+
Sbjct: 32 KSTLTDSLVQKAGIISAAKAGDARFMDTRADE 63
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 24.6 bits (51), Expect = 8.7
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -2
Query: 356 YGLLLHCL-VYGDAVVFSHFVKLID 285
YG CL YG A V+ HF L D
Sbjct: 140 YGFYDECLRKYGSANVWKHFTNLFD 164
>SPAC1952.09c |||acetyl-CoA hydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 521
Score = 24.6 bits (51), Expect = 8.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 287 DTDNAAISKHHRSALHYEVTTSRIPNN 207
D + AI+ H H+EV+ R+P N
Sbjct: 243 DETSQAIAGHLVDFFHHEVSVGRLPKN 269
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 24.6 bits (51), Expect = 8.7
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +3
Query: 366 KAGITTTLNSRCSVLAAANSVFGRWDDTKADD 461
K+ +T +L + +++AA + R+ DT+AD+
Sbjct: 32 KSTLTDSLVQKAGIISAAKAGDARFMDTRADE 63
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 24.6 bits (51), Expect = 8.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 84 ILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSSAAG 194
+LL G PGT K+ +++ V + V+T G S G
Sbjct: 316 VLLYGPPGTGKTMVMRAVAAEANAQVFTI-DGPSVVG 351
>SPAP14E8.04 |oma1||metallopeptidase Oma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 337
Score = 24.6 bits (51), Expect = 8.7
Identities = 23/74 (31%), Positives = 31/74 (41%)
Frame = +3
Query: 207 VIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTT 386
VIRDP FV+ GG + + +G + D + V HE Q A+ I T
Sbjct: 157 VIRDPTPNAFVLPGGKVFVFEGILPMCKGEDGLA---AVLAHETAHQVARHSAEK-IAFT 212
Query: 387 LNSRCSVLAAANSV 428
C V AA S+
Sbjct: 213 RAVSCIVFLAAASL 226
>SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 24.6 bits (51), Expect = 8.7
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +3
Query: 378 TTTLNSRCSVLAAANSVFGRWDDTKADDNIDFMPTIL-SRFDMIF 509
T LN RC V+ +FG+ + ++I ++ IL S F +IF
Sbjct: 415 TNVLNRRCKVIFDMLDIFGKSSADRKMNSITWIIIILISLFVIIF 459
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,993,659
Number of Sequences: 5004
Number of extensions: 38124
Number of successful extensions: 131
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 204242806
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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