Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_B11
(510 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical pr... 324 3e-89
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 197 3e-51
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 197 3e-51
Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical p... 197 3e-51
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 197 3e-51
Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical pr... 196 8e-51
AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm (li... 192 1e-49
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 190 4e-49
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 184 4e-47
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z68880-1|CAA93098.1| 652|Caenorhabditis elegans Hypothetical pr... 31 0.49
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF003140-1|ABR92609.1| 538|Caenorhabditis elegans Hypothetical ... 29 2.0
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl... 27 6.0
AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igca... 27 6.0
Z98853-6|CAE17929.1| 128|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z47812-9|CAA87794.2| 377|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical
protein R10E4.4 protein.
Length = 759
Score = 324 bits (795), Expect = 3e-89
Identities = 152/167 (91%), Positives = 165/167 (98%)
Frame = +3
Query: 9 AIACLLFGGSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSSA 188
+IACLLFGG+RK+LPDG+TRRGDIN+LLLGDPGTAKSQLLKFVE+VSPIGVYTSGKGSSA
Sbjct: 351 SIACLLFGGARKKLPDGITRRGDINVLLLGDPGTAKSQLLKFVEQVSPIGVYTSGKGSSA 410
Query: 189 AGLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAK 368
AGLTASVIRDP SR+F+MEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAK
Sbjct: 411 AGLTASVIRDPQSRSFIMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAK 470
Query: 369 AGITTTLNSRCSVLAAANSVFGRWDDTKADDNIDFMPTILSRFDMIF 509
AGITTTLNSRCSVLAAANSV+GRWD+++ DDNIDFMPTILSRFDMI+
Sbjct: 471 AGITTTLNSRCSVLAAANSVYGRWDESRGDDNIDFMPTILSRFDMIY 517
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 197 bits (481), Expect = 3e-51
Identities = 99/169 (58%), Positives = 125/169 (73%), Gaps = 1/169 (0%)
Frame = +3
Query: 6 GAIACLLFGGSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSS 185
G + LL G ++K +G + RGDIN+ L+GDP TAKSQ+LK VE+ SP +YTSGK SS
Sbjct: 367 GVLLMLLGGVAKKSRDEGTSLRGDINVCLVGDPSTAKSQVLKAVEEFSPRAIYTSGKASS 426
Query: 186 AAGLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIA 365
AAGLTA+V++D S FV+E GA++LAD GV CIDEFDKM D+VAIHEAMEQQTISI
Sbjct: 427 AAGLTAAVVKDEESFEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQTISIT 486
Query: 366 KAGITTTLNSRCSVLAAANSVFGRWDDTK-ADDNIDFMPTILSRFDMIF 509
KAG+ TLN+R S+LAAAN V GR+D ++ N+ I+SRFD+ F
Sbjct: 487 KAGVKATLNARASILAAANPVNGRYDRSRPLKYNVQMSAPIMSRFDLFF 535
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 197 bits (481), Expect = 3e-51
Identities = 99/169 (58%), Positives = 125/169 (73%), Gaps = 1/169 (0%)
Frame = +3
Query: 6 GAIACLLFGGSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSS 185
G + LL G ++K +G + RGDIN+ L+GDP TAKSQ+LK VE+ SP +YTSGK SS
Sbjct: 367 GVLLMLLGGVAKKSRDEGTSLRGDINVCLVGDPSTAKSQVLKAVEEFSPRAIYTSGKASS 426
Query: 186 AAGLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIA 365
AAGLTA+V++D S FV+E GA++LAD GV CIDEFDKM D+VAIHEAMEQQTISI
Sbjct: 427 AAGLTAAVVKDEESFEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQTISIT 486
Query: 366 KAGITTTLNSRCSVLAAANSVFGRWDDTK-ADDNIDFMPTILSRFDMIF 509
KAG+ TLN+R S+LAAAN V GR+D ++ N+ I+SRFD+ F
Sbjct: 487 KAGVKATLNARASILAAANPVNGRYDRSRPLKYNVQMSAPIMSRFDLFF 535
>Z22181-14|CAI46590.1| 516|Caenorhabditis elegans Hypothetical
protein ZK632.1b protein.
Length = 516
Score = 197 bits (481), Expect = 3e-51
Identities = 99/169 (58%), Positives = 125/169 (73%), Gaps = 1/169 (0%)
Frame = +3
Query: 6 GAIACLLFGGSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSS 185
G + LL G ++K +G + RGDIN+ L+GDP TAKSQ+LK VE+ SP +YTSGK SS
Sbjct: 73 GVLLMLLGGVAKKSRDEGTSLRGDINVCLVGDPSTAKSQVLKAVEEFSPRAIYTSGKASS 132
Query: 186 AAGLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIA 365
AAGLTA+V++D S FV+E GA++LAD GV CIDEFDKM D+VAIHEAMEQQTISI
Sbjct: 133 AAGLTAAVVKDEESFEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQTISIT 192
Query: 366 KAGITTTLNSRCSVLAAANSVFGRWDDTK-ADDNIDFMPTILSRFDMIF 509
KAG+ TLN+R S+LAAAN V GR+D ++ N+ I+SRFD+ F
Sbjct: 193 KAGVKATLNARASILAAANPVNGRYDRSRPLKYNVQMSAPIMSRFDLFF 241
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 197 bits (481), Expect = 3e-51
Identities = 99/169 (58%), Positives = 125/169 (73%), Gaps = 1/169 (0%)
Frame = +3
Query: 6 GAIACLLFGGSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSS 185
G + LL G ++K +G + RGDIN+ L+GDP TAKSQ+LK VE+ SP +YTSGK SS
Sbjct: 367 GVLLMLLGGVAKKSRDEGTSLRGDINVCLVGDPSTAKSQVLKAVEEFSPRAIYTSGKASS 426
Query: 186 AAGLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIA 365
AAGLTA+V++D S FV+E GA++LAD GV CIDEFDKM D+VAIHEAMEQQTISI
Sbjct: 427 AAGLTAAVVKDEESFEFVIEAGALMLADNGVCCIDEFDKMDLKDQVAIHEAMEQQTISIT 486
Query: 366 KAGITTTLNSRCSVLAAANSVFGRWDDTK-ADDNIDFMPTILSRFDMIF 509
KAG+ TLN+R S+LAAAN V GR+D ++ N+ I+SRFD+ F
Sbjct: 487 KAGVKATLNARASILAAANPVNGRYDRSRPLKYNVQMSAPIMSRFDLFF 535
>Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical
protein C25D7.6 protein.
Length = 812
Score = 196 bits (478), Expect = 8e-51
Identities = 97/168 (57%), Positives = 124/168 (73%), Gaps = 1/168 (0%)
Frame = +3
Query: 9 AIACLLFGGSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSSA 188
A+ CLL GG K L +G RGDIN+LL+GDP AKSQLL++V +++P + T+G+GSS
Sbjct: 319 ALLCLLLGGMEKILNNGSRLRGDINVLLIGDPSVAKSQLLRYVLRMAPRAITTTGRGSSG 378
Query: 189 AGLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAK 368
GLTA+V DP S +E GAMVLAD GVVCIDEFDKM + DR AIHE MEQ ++I+K
Sbjct: 379 VGLTAAVTTDPDSGERRLEAGAMVLADRGVVCIDEFDKMSDIDRTAIHEVMEQGRVTISK 438
Query: 369 AGITTTLNSRCSVLAAANSVFGRWDDTKAD-DNIDFMPTILSRFDMIF 509
AGI LN+RCSVLAAAN V+GR++ K+ +NI ++LSRFD+IF
Sbjct: 439 AGIHAKLNARCSVLAAANPVYGRYNPFKSPMENIGMQDSLLSRFDLIF 486
>AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 7 protein.
Length = 730
Score = 192 bits (468), Expect = 1e-49
Identities = 91/166 (54%), Positives = 123/166 (74%), Gaps = 3/166 (1%)
Frame = +3
Query: 18 CLLFG--GSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSSAA 191
CLL G +G+ RG IN+L++GDPG AKSQLL +V +++P YT+G+GSS
Sbjct: 362 CLLMALVGGNDNSSNGMKIRGCINVLMMGDPGVAKSQLLGYVNRLAPRSQYTTGRGSSGV 421
Query: 192 GLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKA 371
GLTA+V++DP + +EGGA+VLADGG+ CIDEFDKM + DR AIHE MEQQTISIAKA
Sbjct: 422 GLTAAVMKDPVTGEMSLEGGALVLADGGICCIDEFDKMMDHDRTAIHEVMEQQTISIAKA 481
Query: 372 GITTTLNSRCSVLAAANSVFGRWDDTKA-DDNIDFMPTILSRFDMI 506
GI TTLN+R +++AAAN +GR++ ++ + N+D +LSRFD+I
Sbjct: 482 GIMTTLNARTAIIAAANPAYGRYNPNRSIEQNVDLPAALLSRFDLI 527
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 190 bits (464), Expect = 4e-49
Identities = 98/169 (57%), Positives = 121/169 (71%), Gaps = 3/169 (1%)
Frame = +3
Query: 12 IACLLFGGSRK--RLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSS 185
+ CLLFGG+RK + R +INILL GDPGT+KSQ+L++V ++ P YTSGKGSS
Sbjct: 439 LLCLLFGGTRKDDETTNKTKLRSEINILLCGDPGTSKSQMLQYVYRLLPRSQYTSGKGSS 498
Query: 186 AAGLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIA 365
A GLTASV RD ++ V++ GA+VLAD GV CIDEFDKM E R +HE MEQQT+SIA
Sbjct: 499 AVGLTASVSRDADTKQLVLQTGALVLADNGVCCIDEFDKMNESARSVLHEVMEQQTLSIA 558
Query: 366 KAGITTTLNSRCSVLAAANSVFGRWDDTKA-DDNIDFMPTILSRFDMIF 509
KAGI LN+R SVLAAAN V +W+ K +NI T+LSRFD+IF
Sbjct: 559 KAGIICQLNARASVLAAANPVDSKWNRNKTIVENITLPHTLLSRFDLIF 607
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 184 bits (447), Expect = 4e-47
Identities = 92/167 (55%), Positives = 121/167 (72%), Gaps = 1/167 (0%)
Frame = +3
Query: 9 AIACLLFGGSRKRLPDGLTRRGDINILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSSA 188
AIA LF G K RGDIN+LL GDPGTAKSQ L++ ++P V T+G+G+SA
Sbjct: 469 AIALALFRGEAKNPGAKHRLRGDINVLLCGDPGTAKSQFLRYAAHIAPRSVLTTGQGASA 528
Query: 189 AGLTASVIRDPGSRNFVMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAK 368
GLTA V R P +R + +E GAMVLAD GV IDEFDKM + DR +IHEAMEQQ+ISI+K
Sbjct: 529 VGLTAYVQRHPVTREWTLEAGAMVLADKGVCLIDEFDKMSDQDRTSIHEAMEQQSISISK 588
Query: 369 AGITTTLNSRCSVLAAANSVFGRWDDTKA-DDNIDFMPTILSRFDMI 506
AGI T+L++RC+V+AA+N + GR++ T+ +N+D ILSRFD++
Sbjct: 589 AGIVTSLHARCTVIAASNPIGGRYNPTRTFAENVDLTEPILSRFDVL 635
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 333 EAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRWDDTKADDNIDFMPTILSRFDMIF 509
EA+ T++I ITTTL R S A +D ++ D++ T+L F +F
Sbjct: 156 EALVTSTLNIRGNKITTTLRPRTSPYKRAGDASMSREDLRSPDSVSTFTTVLHVFHKVF 214
>Z68880-1|CAA93098.1| 652|Caenorhabditis elegans Hypothetical
protein T14G10.1 protein.
Length = 652
Score = 31.1 bits (67), Expect = 0.49
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +3
Query: 252 AMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTL 389
A + AD G++C+ F ++DR+ + E + + + ++TTL
Sbjct: 121 AKLFADSGMICLAAFISPFQEDRLDARKIHESENVKFIEVHVSTTL 166
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 81 NILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGS-SAAGLTASVIRDPGSRNFVMEGGAM 257
N+LL+G G K+ L + + +V + + S + AG + + GG +
Sbjct: 143 NVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKLVQAAGGNV 202
Query: 258 VLADGGVVCIDEFDKM 305
A G+V +DE DK+
Sbjct: 203 EKAQQGIVFLDEVDKI 218
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 81 NILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGS-SAAGLTASVIRDPGSRNFVMEGGAM 257
N+LL+G G K+ L + + +V + + S + AG + + GG +
Sbjct: 259 NVLLVGPSGVGKTFLTQTLARVLDVPIALCDCTSMTQAGYVGEDVESVIQKLVQAAGGNV 318
Query: 258 VLADGGVVCIDEFDKM 305
A G+V +DE DK+
Sbjct: 319 EKAQQGIVFLDEVDKI 334
>AF003140-1|ABR92609.1| 538|Caenorhabditis elegans Hypothetical
protein C44E4.5 protein.
Length = 538
Score = 29.1 bits (62), Expect = 2.0
Identities = 30/103 (29%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Frame = -2
Query: 389 QSCCYSGLSNRYGLLLHCLVYG-DAVVFSHFVKLIDTDN---AAISKHHRSALHYEVTTS 222
Q+ C SN L H V+ D +F + K D+ + H A+ YE T
Sbjct: 36 QNLCLRAPSNEMITLQHMKVFSNDNQLFCDYSKCTDSQQFLYRILDTGHIQAMVYEKKT- 94
Query: 221 RIPNNRSSETGRTGTLPGSVHAYRRNFLYELQQLRFSCTGISE 93
+I N + GT S A+ N L+ L +C GISE
Sbjct: 95 QIWNTSIVGSIDVGTNASS--AFPTNLLFTENNLVVACNGISE 135
>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
protein 2 protein.
Length = 1080
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -3
Query: 487 NIVGMKSMLSSALVSSQRPKTELAAASTEQREFRVVVIPALAIDMVCCSIASCMAT 320
N G ++ ++ L + +TEL Q + + VIPA D V SI +T
Sbjct: 227 NEAGNRAEIARKLTEAVYRRTELETLKDRQEQLLLSVIPAYLADQVSKSIIQSSST 282
>AC024778-2|AAF60566.2| 2325|Caenorhabditis elegans Neuronal igcam
protein 4 protein.
Length = 2325
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 282 CIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANS 425
C+ F +DD V I + Q IS ++ G+TTTLN+R +++ +S
Sbjct: 247 CVTSFGS--KDD-VRIRWFLNGQQISGSEVGMTTTLNNRRLIISNPSS 291
>Z98853-6|CAE17929.1| 128|Caenorhabditis elegans Hypothetical
protein R08A2.7 protein.
Length = 128
Score = 27.1 bits (57), Expect = 7.9
Identities = 23/73 (31%), Positives = 29/73 (39%)
Frame = +3
Query: 78 INILLLGDPGTAKSQLLKFVEKVSPIGVYTSGKGSSAAGLTASVIRDPGSRNFVMEGGAM 257
I L + T KS K K S +Y + A G + R P N V+E GA
Sbjct: 37 ITTLWFEEQETCKSVTTKIWGKASAASIYWALDVKRALGGLSP--RSPSKSNVVIEVGAK 94
Query: 258 VLADGGVVCIDEF 296
+ V IDEF
Sbjct: 95 LRVGFSVENIDEF 107
>Z47812-9|CAA87794.2| 377|Caenorhabditis elegans Hypothetical
protein T05H10.8 protein.
Length = 377
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +3
Query: 285 IDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSV 407
IDE K+ E E+ TISI K G +NS SV
Sbjct: 321 IDEIVKLVEARNAKYLESTNNSTISIPKGGNLAKVNSEISV 361
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,278,460
Number of Sequences: 27780
Number of extensions: 228434
Number of successful extensions: 686
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -