Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_B10
(470 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 61 5e-10
04_04_1351 - 32827136-32827984 31 0.47
04_04_0540 + 26091942-26092310 31 0.47
07_03_1620 - 28180020-28180862 31 0.62
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 30 1.1
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 29 1.4
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 29 1.4
09_02_0082 - 4060018-4061604 29 1.9
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 1.9
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 29 2.5
05_01_0462 - 3658153-3658290,3658394-3658540,3658622-3658720,365... 29 2.5
04_04_1248 - 32051679-32052356,32053617-32053778,32054147-320542... 29 2.5
02_04_0289 + 21615745-21616155,21617417-21617870,21618162-216182... 29 2.5
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 29 2.5
09_06_0137 - 21080263-21081894 28 3.3
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 28 4.4
07_03_1107 - 24024387-24024497,24025799-24026410 28 4.4
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 28 4.4
03_03_0249 + 15832086-15833261 28 4.4
11_04_0158 + 14207463-14207629,14207724-14207774,14207874-142080... 27 5.8
05_02_0124 + 6849034-6851502 27 5.8
02_05_0599 - 30251708-30251815,30251864-30251984,30252068-302522... 27 5.8
01_06_1183 - 35176780-35177266,35179631-35181093 27 5.8
09_01_0066 - 978018-978500,978588-979034,979113-979412,979521-97... 27 7.6
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 60.9 bits (141), Expect = 5e-10
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +2
Query: 8 AIHCMQVHKEAVDKVPNSLPNRSNIEIEIYGMEGIPPE 121
AIH +QVHKE+V KVPN+ P R + EIEI+GM+GIPP+
Sbjct: 51 AIHVLQVHKESVTKVPNAKPERESTEIEIFGMQGIPPD 88
>04_04_1351 - 32827136-32827984
Length = 282
Score = 31.1 bits (67), Expect = 0.47
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = -3
Query: 465 VVGGALI-VALLYAGKVGLLGFEVGTLAAGNSGLIPGIIILGACINGGII*FMGICPGYI 289
VVGG + VA + G VG + VG + G + ++ GI+ + GG++ + G +
Sbjct: 70 VVGGVVGGVAPVVGGIVGKVPPVVGGVVGGVAPVVGGIVGKVPPVVGGVVGGVAPVVGGV 129
Query: 288 PGGTGPMGVGRIPCV--TVEGPAP 223
GG P+ G P V V G AP
Sbjct: 130 VGGVAPVVGGVAPVVGGVVGGIAP 153
>04_04_0540 + 26091942-26092310
Length = 122
Score = 31.1 bits (67), Expect = 0.47
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 462 VGGALIVALLYAGKVGLLGFEVGTLAAGNSGLIPG 358
+GG + + AG G+ G VGT + G +G++PG
Sbjct: 67 MGGIVTCGTVAAGTAGIGGIAVGTGSFGTAGMLPG 101
>07_03_1620 - 28180020-28180862
Length = 280
Score = 30.7 bits (66), Expect = 0.62
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -2
Query: 349 PRCLHKWRHHMIHGHMP-WIHPGRHRPHGCG*DTLC 245
P C H R HG W+HP R R C T C
Sbjct: 108 PSCAHGLRCRYAHGVFELWLHPSRFRTRMCSAGTRC 143
>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
Length = 640
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -2
Query: 433 ICWEGGFARVRGRHTRRWEQRPHSGHHHPRCLHKW 329
IC +GG T W + P + H RCL W
Sbjct: 548 ICLDGGGGGGEKTTTEAWVETPCAHRFHSRCLESW 582
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Frame = -2
Query: 406 VRGRHTRRWEQRPHSGHHHPRCLHKWRHH---MIHGHMP-WIHPGRHRPH 269
+R H PH HHHP HH H H P HP H PH
Sbjct: 31 LRHPHHHPPHHHPHPPHHHPPHHPHPPHHPHPPHHPHPPHHPHPPHHHPH 80
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +2
Query: 353 MMPGMRPLFPAASVPTSNPSK--PTFP--AYSNATISAPPTT 466
+ P RP PA P S P + PT P A++ A APPTT
Sbjct: 248 VQPPQRPPAPATKPPPSFPPQLAPTMPPPAHAPAETPAPPTT 289
>09_02_0082 - 4060018-4061604
Length = 528
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 338 QAPRMMMPGM-RPLFPAASVPTSNPSKPTFPAYSNATISAPPTTS 469
+ PRM+ P + P PA VPT + PT PA ++A P T+
Sbjct: 410 RVPRMLAPPIPMPPAPAPPVPTPSMPSPTVPA---PPVTAAPATA 451
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTTS 469
P P P+ S PTS PT P+YS + S PT+S
Sbjct: 1743 PSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSS 1778
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P P+ S PTS+ PT PAYS + PT+
Sbjct: 1764 PSYSPTSPSYS-PTSSAYSPTSPAYSPTSPGYSPTS 1798
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P PA S PTS PT P+YS + S PT+
Sbjct: 1653 PAYSPTSPAYS-PTSPSYSPTSPSYSPTSPSYSPTS 1687
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P P S PTS PT PAYS + S PT+
Sbjct: 1639 PSYSPTSPVYS-PTSPAYSPTSPAYSPTSPSYSPTS 1673
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P P+ S PTS PT P+YS + S PT+
Sbjct: 1597 PSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTS 1631
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P P+ S PTS PT P+YS + S PT+
Sbjct: 1604 PSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTS 1638
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P P+ S PTS PT P+YS + S PT+
Sbjct: 1611 PSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTS 1645
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P PA S PTS PT P+YS + S PT+
Sbjct: 1646 PVYSPTSPAYS-PTSPAYSPTSPSYSPTSPSYSPTS 1680
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P P+ S PTS PT P+YS + S PT+
Sbjct: 1660 PAYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTS 1694
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P P+ S PTS PT P+YS + S PT+
Sbjct: 1667 PSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTS 1701
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P P+ S PTS PT P+YS + S PT+
Sbjct: 1674 PSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTS 1708
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P P+ S PTS PT P+YS + S PT+
Sbjct: 1681 PSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTS 1715
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P P+ S PTS PT PAYS + PT+
Sbjct: 1695 PSYSPTSPSYS-PTSPSYSPTSPAYSPTSPGYSPTS 1729
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P P+ S PTS PT P YS + S PT+
Sbjct: 1702 PSYSPTSPSYS-PTSPAYSPTSPGYSPTSPSYSPTS 1736
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 359 PGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTT 466
P P PA S PTS PT P+YS + + PT+
Sbjct: 1709 PSYSPTSPAYS-PTSPGYSPTSPSYSPTSPNYSPTS 1743
>05_01_0462 -
3658153-3658290,3658394-3658540,3658622-3658720,
3658802-3659253,3659597-3660280,3662072-3662180
Length = 542
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 371 PLFPAASVPTSNPSKPTFPAYSNATISAPPTTS 469
P F ++S P + +P P+Y A S PP TS
Sbjct: 324 PAFASSSNPGAVSHEPAIPSYPPAAPSYPPATS 356
>04_04_1248 -
32051679-32052356,32053617-32053778,32054147-32054269,
32054686-32054793
Length = 356
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 392 VPTSNPSKPTFPAYSNATISAPPTTS 469
VP + P+ FP ++A+ +APPT S
Sbjct: 312 VPLTEPAVAAFPGVASASSAAPPTAS 337
>02_04_0289 +
21615745-21616155,21617417-21617870,21618162-21618217,
21618307-21618437,21618565-21618727
Length = 404
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = -2
Query: 370 PHSGHHHPRC--LHKWRHHMIHGHMPWIHPGRHRPHG 266
PH H HP +H HH I W+ PHG
Sbjct: 22 PHHHHPHPHAHGMHPHAHHHIQAQPRWVVIPYPPPHG 58
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/49 (40%), Positives = 21/49 (42%)
Frame = -3
Query: 408 GFEVGTLAAGNSGLIPGIIILGACINGGII*FMGICPGYIPGGTGPMGV 262
GF G G G +PG G GG F G PG PGG P GV
Sbjct: 531 GFPGGMPGGGFPGGMPGGGFPGGMPGGG---FPGGMPGGFPGGAMPGGV 576
>09_06_0137 - 21080263-21081894
Length = 543
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +2
Query: 368 RPLFPAASVPTSNPSKPTFPAYSNA---TISAPPT 463
R PAA VP + PS+P P S+A +++PP+
Sbjct: 70 RRAHPAAPVPATAPSEPPLPELSSALSGLLASPPS 104
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 338 QAPRMMMPGMRPLFPAASVPTSNPSKPTFPAYSNATISAP 457
QA PGM P S+PT+ P PT A T P
Sbjct: 17 QAAMAQRPGMPPAVVPPSLPTTTPPAPTVVAPPLPTTPPP 56
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 341 APRMMMPGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTTS 469
+P + P P PAA P + P+KP PA + A P S
Sbjct: 111 SPPVEAPVASPPSPAAEAPATIPTKPDAPAPAPAKKKKPSPPS 153
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -2
Query: 397 RHTRRWEQRPHSGHHHPRCLHKWRHHMIHGHMPWIH 290
R + + R H HHH H H H H P +H
Sbjct: 60 RRSLPFAPRAHGDHHHGHHHHHHGHGHSHHHGPEVH 95
>03_03_0249 + 15832086-15833261
Length = 391
Score = 27.9 bits (59), Expect = 4.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 362 GMRPLFPAASVPTSNPSKPTFPAYSNATISAP 457
G+R L AS PT+ + P P+ S+A +AP
Sbjct: 23 GLRRLSTRASAPTTPRASPATPSPSSAAAAAP 54
>11_04_0158 +
14207463-14207629,14207724-14207774,14207874-14208002,
14209342-14209447,14209491-14209601,14210042-14210098,
14210903-14211727
Length = 481
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +2
Query: 341 APRMMMPGMRPLF---PAASVPTSNPSKPTFP 427
AP + PG PLF PAA P+S P P FP
Sbjct: 269 APPQLPPGASPLFPPGPAAFHPSSRP-MPPFP 299
>05_02_0124 + 6849034-6851502
Length = 822
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +2
Query: 356 MPGMRPLFPAASVPTSNPSKPTFPAYSNATISAPPTTS 469
+PG P P P +P TFP Y + + P +S
Sbjct: 8 LPGKLPRQPPPPPPPPSPPNSTFPRYPKSLAAHPALSS 45
>02_05_0599 -
30251708-30251815,30251864-30251984,30252068-30252215,
30252303-30252480,30252587-30252625,30252704-30252799,
30252879-30253030,30253336-30253722,30253836-30253940,
30254083-30254098
Length = 449
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 90 KYMVW-KVYHLRI*RNMKSRNQVEVKVLTAKTMSQPQRKKQPQH 218
K M W KVY+ RN K+ +QV+ + L+ T + P+H
Sbjct: 248 KSMPWAKVYYRSCWRNTKNTSQVQGEDLSPSTQDMNNEQYGPKH 291
>01_06_1183 - 35176780-35177266,35179631-35181093
Length = 649
Score = 27.5 bits (58), Expect = 5.8
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Frame = -2
Query: 427 WEGGFARVRGRHTRRWEQRPHSG--HHHPRCLHKWRHHMIHGHMPWIHPG--RHR 275
W GG+A + G W++ P +G H + K R G HP RHR
Sbjct: 579 WMGGYACLDGGRFAAWQRPPKAGCVHRNGEARFKRRLIAFRGKSEKFHPTSCRHR 633
>09_01_0066 -
978018-978500,978588-979034,979113-979412,979521-979855,
980325-980703
Length = 647
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -2
Query: 418 GFARVRGRHTRRWEQRPHSGH--HHPRCLHKWRHHMIHGHMPWIHP 287
G A R R RR R + H H RCLH+ + H+ P P
Sbjct: 69 GAALYRARRCRRKLLRCRARHRRHRDRCLHRAQRHLHRPATPSTEP 114
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,487,879
Number of Sequences: 37544
Number of extensions: 257071
Number of successful extensions: 1132
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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