Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_B06
         (558 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF209858-1|AAG43498.1|  321|Drosophila melanogaster LD14 protein.      30   2.4  
AE014298-1281|AAF46447.2|  321|Drosophila melanogaster CG12664-P...    30   2.4  
AB065095-1|BAB83666.1|  321|Drosophila melanogaster transmembran...    30   2.4  

>AF209858-1|AAG43498.1|  321|Drosophila melanogaster LD14 protein.
          Length = 321

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 289 TSTIPCPRSGPCVCEQLKKIKKNLYILQSMSWH 191
           T+T P P S P   +QL + +++ Y   S  WH
Sbjct: 62  TATAPTPASAPFAGKQLNRCRQSCYQQLSKDWH 94


>AE014298-1281|AAF46447.2|  321|Drosophila melanogaster CG12664-PB
           protein.
          Length = 321

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 289 TSTIPCPRSGPCVCEQLKKIKKNLYILQSMSWH 191
           T+T P P S P   +QL + +++ Y   S  WH
Sbjct: 62  TATAPTPASAPFAGKQLNRCRQSCYQQLSKDWH 94


>AB065095-1|BAB83666.1|  321|Drosophila melanogaster transmembrane
           protein FEND protein.
          Length = 321

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 289 TSTIPCPRSGPCVCEQLKKIKKNLYILQSMSWH 191
           T+T P P S P   +QL + +++ Y   S  WH
Sbjct: 62  TATAPTPASAPFAGKQLNRCRQSCYQQLSKDWH 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,549,627
Number of Sequences: 53049
Number of extensions: 431003
Number of successful extensions: 569
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)