Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_B03
(592 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 327 8e-90
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 327 8e-90
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 327 8e-90
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 321 4e-88
X79339-1|CAA55897.1| 606|Drosophila melanogaster musashi protein. 29 3.6
BT003274-1|AAO25031.1| 313|Drosophila melanogaster LD15419p pro... 29 3.6
AY119171-1|AAM51031.1| 634|Drosophila melanogaster RH49436p pro... 29 3.6
AY051802-1|AAK93226.1| 606|Drosophila melanogaster LD31631p pro... 29 3.6
AE014297-3816|AAF56478.2| 606|Drosophila melanogaster CG5099-PA... 29 3.6
AE014297-3812|AAN14056.2| 634|Drosophila melanogaster CG5099-PB... 29 3.6
AY061207-1|AAL28755.1| 707|Drosophila melanogaster LD15658p pro... 29 4.7
AE014134-3600|EAA46022.2| 714|Drosophila melanogaster CG17490-P... 29 4.7
AY325814-1|AAP88969.1| 509|Drosophila melanogaster traffic jam ... 28 8.2
AE014134-3104|AAF53804.2| 509|Drosophila melanogaster CG10034-P... 28 8.2
AE013599-3492|ABI31111.1| 945|Drosophila melanogaster CG3682-PC... 28 8.2
AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB... 28 8.2
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 327 bits (803), Expect = 8e-90
Identities = 148/185 (80%), Positives = 165/185 (89%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 218 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 397
V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 398 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGKL 577
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ KI D+IKFDSG L
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 578 CMITG 592
CMITG
Sbjct: 181 CMITG 185
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 327 bits (803), Expect = 8e-90
Identities = 148/185 (80%), Positives = 165/185 (89%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 218 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 397
V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 398 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGKL 577
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ KI D+IKFDSG L
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 578 CMITG 592
CMITG
Sbjct: 181 CMITG 185
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 327 bits (803), Expect = 8e-90
Identities = 148/185 (80%), Positives = 165/185 (89%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAE 60
Query: 218 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 397
V KIV QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 398 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGKL 577
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ KI D+IKFDSG L
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 578 CMITG 592
CMITG
Sbjct: 181 CMITG 185
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 321 bits (789), Expect = 4e-88
Identities = 146/185 (78%), Positives = 163/185 (88%)
Frame = +2
Query: 38 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 217
MARGPKKHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G E
Sbjct: 1 MARGPKKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAE 60
Query: 218 VLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 397
V KIV QRL+KV GKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAK
Sbjct: 61 VTKIVMQRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAK 120
Query: 398 YKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGKL 577
YKLCKV++ G K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ KI D+IKFDSG L
Sbjct: 121 YKLCKVKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNL 180
Query: 578 CMITG 592
CMITG
Sbjct: 181 CMITG 185
>X79339-1|CAA55897.1| 606|Drosophila melanogaster musashi protein.
Length = 606
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 445 AVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQTLHDH 588
++P A A+A + AHQ + + AA H HQQ +QT + H
Sbjct: 453 SIPASAATANAALM-QAHQAQSVAAAAHHHQQQQQQQHHHQQQTHNAH 499
>BT003274-1|AAO25031.1| 313|Drosophila melanogaster LD15419p
protein.
Length = 313
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 445 AVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQTLHDH 588
++P A A+A + AHQ + + AA H HQQ +QT + H
Sbjct: 160 SIPASAATANAALM-QAHQAQSVAAAAHHHQQQQQQQHHHQQQTHNAH 206
>AY119171-1|AAM51031.1| 634|Drosophila melanogaster RH49436p
protein.
Length = 634
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 445 AVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQTLHDH 588
++P A A+A + AHQ + + AA H HQQ +QT + H
Sbjct: 481 SIPASAATANAALM-QAHQAQSVAAAAHHHQQQQQQQHHHQQQTHNAH 527
>AY051802-1|AAK93226.1| 606|Drosophila melanogaster LD31631p
protein.
Length = 606
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 445 AVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQTLHDH 588
++P A A+A + AHQ + + AA H HQQ +QT + H
Sbjct: 453 SIPASAATANAALM-QAHQAQSVAAAAHHHQQQQQQQHHHQQQTHNAH 499
>AE014297-3816|AAF56478.2| 606|Drosophila melanogaster CG5099-PA,
isoform A protein.
Length = 606
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 445 AVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQTLHDH 588
++P A A+A + AHQ + + AA H HQQ +QT + H
Sbjct: 453 SIPASAATANAALM-QAHQAQSVAAAAHHHQQQQQQQHHHQQQTHNAH 499
>AE014297-3812|AAN14056.2| 634|Drosophila melanogaster CG5099-PB,
isoform B protein.
Length = 634
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 445 AVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQTLHDH 588
++P A A+A + AHQ + + AA H HQQ +QT + H
Sbjct: 481 SIPASAATANAALM-QAHQAQSVAAAAHHHQQQQQQQHHHQQQTHNAH 527
>AY061207-1|AAL28755.1| 707|Drosophila melanogaster LD15658p
protein.
Length = 707
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = -1
Query: 412 LAQLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNVHKSRRVRGVSPHFPVHFDETLL 233
L + V G + C +D + + L C G + + +R +P+F L
Sbjct: 328 LTKPVSGIYACCWIDQKEELFCLSDNNTLYCISFGMSEMNDQTLRISTPNFAPSALMRLQ 387
Query: 232 HNLKHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAA 107
HN + L ++ + + Q+ + QL+ + RRV+AA
Sbjct: 388 HNAEALQEYKKHPDSLRQKLYREYKQQQLISMSKNIRRVNAA 429
>AE014134-3600|EAA46022.2| 714|Drosophila melanogaster CG17490-PB,
isoform B protein.
Length = 714
Score = 29.1 bits (62), Expect = 4.7
Identities = 23/102 (22%), Positives = 43/102 (42%)
Frame = -1
Query: 412 LAQLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNVHKSRRVRGVSPHFPVHFDETLL 233
L + V G + C +D + + L C G + + +R +P+F L
Sbjct: 335 LTKPVSGIYACCWIDQKEELFCLSDNNTLYCISFGMSEMNDQTLRISTPNFAPSALMRLQ 394
Query: 232 HNLKHLIAGERVLEPISQEDH*RQAFAQLVGTRRGPRRVHAA 107
HN + L ++ + + Q+ + QL+ + RRV+AA
Sbjct: 395 HNAEALQEYKKHPDSLRQKLYREYKQQQLISMSKNIRRVNAA 436
>AY325814-1|AAP88969.1| 509|Drosophila melanogaster traffic jam
protein.
Length = 509
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +1
Query: 436 QERAVPGDARRAHAPVPGPAHQ---GERLGAARHLHQQDHG--LHQVRLRQTLHDH 588
QE A D +R +A AH G+ L A+H H HG HQV L+Q+ + H
Sbjct: 234 QEEAEEWDRQRDYALQAAAAHHHHHGQPLMQAQH-HPHGHGGHPHQVMLQQSKYPH 288
>AE014134-3104|AAF53804.2| 509|Drosophila melanogaster CG10034-PA
protein.
Length = 509
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +1
Query: 436 QERAVPGDARRAHAPVPGPAHQ---GERLGAARHLHQQDHG--LHQVRLRQTLHDH 588
QE A D +R +A AH G+ L A+H H HG HQV L+Q+ + H
Sbjct: 234 QEEAEEWDRQRDYALQAAAAHHHHHGQPLMQAQH-HPHGHGGHPHQVMLQQSKYPH 288
>AE013599-3492|ABI31111.1| 945|Drosophila melanogaster CG3682-PC,
isoform C protein.
Length = 945
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 409 QGAARRDRPQERAVPGDARRAHAPVPGPAH 498
+G+ RR Q+R PG P P PAH
Sbjct: 581 RGSPRRKDAQDRTTPGTEPHTTNPNPAPAH 610
>AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB,
isoform B protein.
Length = 737
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +2
Query: 83 KAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLK---YALTGNEVLKIVKQRLIKV 253
++W L + AP P G + E +R ++ ++TG E++++VKQ KV
Sbjct: 4 RSWNLLQYATEKAPIPLDG-YTAEEAAEFKDSIRQKIVDDLKSMTGEELIELVKQNAAKV 62
Query: 254 -DGKVRTDPTYP 286
+ KV PT P
Sbjct: 63 EEEKVEIPPTEP 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,089,739
Number of Sequences: 53049
Number of extensions: 606226
Number of successful extensions: 1928
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1927
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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