Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_B01
(209 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 0.23
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 0.91
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 0.91
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 0.91
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 1.6
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 19 4.9
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 19 4.9
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 19 4.9
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 19 4.9
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 19 6.4
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 19 8.5
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 19 8.5
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 19 8.5
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 0.23
Identities = 8/31 (25%), Positives = 19/31 (61%)
Frame = -2
Query: 106 VTVSWLSFIKNLTSFILLAYRLIFIENKGGV 14
+ +SW+S + + ++ Y++I I + GG+
Sbjct: 1098 IRISWMSPPLSAANGVITGYKVIVIPSGGGI 1128
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.8 bits (44), Expect = 0.91
Identities = 7/31 (22%), Positives = 16/31 (51%)
Frame = -2
Query: 175 CVFMATSTPVIVPWTTLPFFNSIVTVSWLSF 83
C+ + +I+ + FFN ++ W++F
Sbjct: 94 CMLLLLVANLIILPVAISFFNDDLSTRWIAF 124
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 0.91
Identities = 7/31 (22%), Positives = 16/31 (51%)
Frame = -2
Query: 175 CVFMATSTPVIVPWTTLPFFNSIVTVSWLSF 83
C+ + +I+ + FFN ++ W++F
Sbjct: 94 CMLLLLVANLIILPVAISFFNDDLSTRWIAF 124
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 0.91
Identities = 7/31 (22%), Positives = 16/31 (51%)
Frame = -2
Query: 175 CVFMATSTPVIVPWTTLPFFNSIVTVSWLSF 83
C+ + +I+ + FFN ++ W++F
Sbjct: 94 CMLLLLVANLIILPVAISFFNDDLSTRWIAF 124
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.0 bits (42), Expect = 1.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 32 YKN*PISQQNEASKIFDEAQPRNGDY*VEKRQR 130
+KN P + S + +E NGDY + + R
Sbjct: 221 FKNLPEETLIKISDVLEETFYNNGDYIIRQGAR 253
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6
variant 2 precursor protein.
Length = 94
Score = 19.4 bits (38), Expect = 4.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 73 LTSFILLAYRLIFIENKGGVG 11
L SF+LLA + + GG G
Sbjct: 6 LASFLLLAVFSMLVGGFGGFG 26
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6
variant 1 precursor protein.
Length = 92
Score = 19.4 bits (38), Expect = 4.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 73 LTSFILLAYRLIFIENKGGVG 11
L SF+LLA + + GG G
Sbjct: 6 LASFLLLAIFSMLVGGFGGFG 26
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 19.4 bits (38), Expect = 4.9
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = -2
Query: 100 VSWLSFIKNLTSFILLAYRLI 38
+ WLSF + ++I++ L+
Sbjct: 408 IEWLSFFIVIFTYIIILITLV 428
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 19.4 bits (38), Expect = 4.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 96 ETVTIELKNGSVVHGTITG 152
+ + I L GS++ GT+ G
Sbjct: 40 QAILIALVLGSIIVGTVIG 58
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 19.0 bits (37), Expect = 6.4
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = -2
Query: 172 VFMATSTPVIVPWTTLPFFNSIVTVSWLSFIKNLTSF 62
V + T+ + WT PF T W+ ++ T+F
Sbjct: 16 VLLDTTQEEKLEWTKYPFGAEANTPGWVE--ESFTNF 50
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 18.6 bits (36), Expect = 8.5
Identities = 6/11 (54%), Positives = 6/11 (54%)
Frame = -3
Query: 189 LPPSDAYSWRH 157
LPP Y W H
Sbjct: 107 LPPEIYYIWSH 117
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 18.6 bits (36), Expect = 8.5
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = +2
Query: 122 RQRCPRNYNWCRC 160
RQ CP C+C
Sbjct: 173 RQSCPLILGSCKC 185
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 18.6 bits (36), Expect = 8.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 123 GSVVHGTITGVDVAMNTHLKAVKVTL 200
G ++H I GV + T L +TL
Sbjct: 30 GVLIHLQILGVSKQIETGLAFPSITL 55
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,912
Number of Sequences: 438
Number of extensions: 924
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 3039192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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