Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_A23
(465 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 25 0.40
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 25 0.40
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 25 0.40
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 25 0.40
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 1.6
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 1.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 1.6
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 4.9
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 4.9
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 4.9
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 4.9
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 4.9
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 21 4.9
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 6.5
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 6.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 6.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 6.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 6.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 6.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 6.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 6.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 6.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 6.5
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.40
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 159 YKSSNYRRYNKNSVN 115
YK SNY YN N+ N
Sbjct: 89 YKYSNYNNYNNNNYN 103
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.40
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 159 YKSSNYRRYNKNSVN 115
YK SNY YN N+ N
Sbjct: 89 YKYSNYNNYNNNNYN 103
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.40
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 159 YKSSNYRRYNKNSVN 115
YK SNY YN N+ N
Sbjct: 89 YKYSNYNNYNNNNYN 103
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.40
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 159 YKSSNYRRYNKNSVN 115
YK SNY YN N+ N
Sbjct: 89 YKYSNYNNYNNNNYN 103
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 1.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 159 YKSSNYRRYNKNSVN 115
YK SNY YN N N
Sbjct: 89 YKYSNYNNYNNNYNN 103
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 1.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 159 YKSSNYRRYNKNSVN 115
YK SNY YN N N
Sbjct: 89 YKYSNYNNYNNNYNN 103
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 1.6
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 159 YKSSNYRRYNKNSVN 115
YK SNY YN N N
Sbjct: 322 YKYSNYNNYNNNYNN 336
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 159 YKSSNYRRYNKN 124
YK SNY YN N
Sbjct: 89 YKYSNYNNYNNN 100
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 159 YKSSNYRRYNKN 124
YK SNY YN N
Sbjct: 89 YKYSNYNNYNNN 100
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 159 YKSSNYRRYNKN 124
YK SNY YN N
Sbjct: 89 YKYSNYNNYNNN 100
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 159 YKSSNYRRYNKN 124
YK SNY YN N
Sbjct: 89 YKYSNYNNYNNN 100
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 159 YKSSNYRRYNKN 124
YK SNY YN N
Sbjct: 89 YKYSNYNNYNNN 100
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 159 YKSSNYRRYNKN 124
YK SNY YN N
Sbjct: 89 YKYSNYNNYNNN 100
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 159 YKSSNYRRYNKN 124
YK SNY YN N
Sbjct: 89 YKYSNYNNYNNN 100
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 4.9
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 159 YKSSNYRRYNKNSVN 115
Y ++NY YN N+ N
Sbjct: 96 YNNNNYNNYNYNNNN 110
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 374 WLIDSCSLFHRKYDSCPL 427
W+I CS F +D C L
Sbjct: 79 WVIHPCSSFRFYWDLCML 96
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 374 WLIDSCSLFHRKYDSCPL 427
W+I CS F +D C L
Sbjct: 79 WVIHPCSSFRFYWDLCML 96
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 374 WLIDSCSLFHRKYDSCPL 427
W+I CS F +D C L
Sbjct: 79 WVIHPCSSFRFYWDLCML 96
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 4.9
Identities = 6/16 (37%), Positives = 8/16 (50%)
Frame = +2
Query: 368 CLWLIDSCSLFHRKYD 415
C W+ D C + YD
Sbjct: 556 CCWVCDQCEEYEYVYD 571
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 21.4 bits (43), Expect = 4.9
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +1
Query: 421 SINSKHHNGIAH 456
S++ HHNG+ H
Sbjct: 21 SVHHCHHNGVVH 32
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 6.5
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 159 YKSSNYRRYNKNSVN 115
Y SNY YN N N
Sbjct: 89 YNYSNYNNYNNNYNN 103
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 159 YKSSNYRRYNKNS 121
Y SNY YN N+
Sbjct: 89 YNYSNYNNYNNNN 101
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 159 YKSSNYRRYNKNS 121
Y SNY YN N+
Sbjct: 89 YNYSNYNNYNNNN 101
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 159 YKSSNYRRYNKNS 121
Y SNY YN N+
Sbjct: 89 YNYSNYNNYNNNN 101
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 159 YKSSNYRRYNKNS 121
Y SNY YN N+
Sbjct: 89 YNYSNYNNYNNNN 101
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 159 YKSSNYRRYNKNS 121
Y SNY YN N+
Sbjct: 89 YNYSNYNNYNNNN 101
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 159 YKSSNYRRYNKNS 121
Y SNY YN N+
Sbjct: 89 YNYSNYNNYNNNN 101
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 159 YKSSNYRRYNKNS 121
Y SNY YN N+
Sbjct: 89 YNYSNYNNYNNNN 101
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 159 YKSSNYRRYNKNS 121
Y SNY YN N+
Sbjct: 89 YNYSNYNNYNNNN 101
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.0 bits (42), Expect = 6.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 159 YKSSNYRRYNKNSVN 115
YK SNY YN + N
Sbjct: 322 YKYSNYNNYNNYNNN 336
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,828
Number of Sequences: 438
Number of extensions: 2433
Number of successful extensions: 30
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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