Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_A21
         (478 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.55 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.55 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   2.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.0  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.6 bits (51), Expect = 0.55
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 267  TWSTSTVKAAASTQKTL-ERGRSSISACTLTLVPSTRDSEITSI 395
            T STS+  +  S QK+L  RGRSS S+   TL+P    +E T +
Sbjct: 1822 TSSTSSDISPMSEQKSLPRRGRSSRSSLR-TLLPPISVAETTFV 1864


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.6 bits (51), Expect = 0.55
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 267  TWSTSTVKAAASTQKTL-ERGRSSISACTLTLVPSTRDSEITSI 395
            T STS+  +  S QK+L  RGRSS S+   TL+P    +E T +
Sbjct: 1818 TSSTSSDISPMSEQKSLPRRGRSSRSSLR-TLLPPISVAETTFV 1860


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 354 TLVPSTRDSEITSIRKYLPERLPTTRSWPRSRTL 455
           T +    +      +KYLPER  TT + P S  L
Sbjct: 423 TWIAGLNEENFKDAKKYLPERW-TTPTTPHSPLL 455


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 305  PEDARARALVDQ 340
            PE  R++AL+DQ
Sbjct: 1320 PESMRSKALIDQ 1331


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,119
Number of Sequences: 438
Number of extensions: 2171
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)