Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_A14
         (430 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   1.4  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   1.4  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   1.4  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          23   1.4  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          23   1.4  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   1.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   1.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   1.4  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.3  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   3.3  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   3.3  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   4.4  

>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 6   TRIKKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 110
           +R ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 29  SRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 6   TRIKKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 110
           +R ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 29  SRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 6   TRIKKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 110
           +R ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 29  SRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 6   TRIKKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 110
           +R ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 29  SRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 6   TRIKKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 110
           +R ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 29  SRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 6   TRIKKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 110
           +R ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 29  SRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 6   TRIKKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 110
           +R ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 29  SRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 6   TRIKKNRL**RRTNVSEQ*RGRSHLEPRKPAIVEY 110
           +R ++ RL  RR  + +Q R R H   +K  I+EY
Sbjct: 29  SRTQEERLRRRREWMIQQEREREHERLKKKMILEY 63


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -3

Query: 152 RIPRLIPCPKRFR*VLYNCWFTGLKMRP 69
           R+P  + CP+    ++ +CW      RP
Sbjct: 856 RLPAPMDCPEAIYQLMLDCWQKERTHRP 883


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 244 RQAFYGSYDRLRNRLP 291
           R A++G YD  R  LP
Sbjct: 190 RAAYFGFYDTARGMLP 205


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 244 RQAFYGSYDRLRNRLP 291
           R A++G YD  R  LP
Sbjct: 190 RAAYFGFYDTARGMLP 205


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 58  NDGGGRILSP 87
           NDG G ILSP
Sbjct: 358 NDGNGNILSP 367


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,526
Number of Sequences: 438
Number of extensions: 2754
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)