Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_A12
         (457 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF117815-1|AAD13296.1|   88|Homo sapiens molybdopterin synthase ...    57   2e-08
AF091871-1|AAD14598.1|   88|Homo sapiens molybdopterin-synthase ...    57   2e-08
BC130338-1|AAI30339.1|  485|Homo sapiens tektin 5 protein.             29   7.6  
BC130336-1|AAI30337.1|  485|Homo sapiens tektin 5 protein.             29   7.6  
AK057433-1|BAB71484.1|  485|Homo sapiens protein ( Homo sapiens ...    29   7.6  

>AF117815-1|AAD13296.1|   88|Homo sapiens molybdopterin synthase
           small subunit protein.
          Length = 88

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
 Frame = +1

Query: 211 VKLLFFARSKELAGTRESTIQLPKKISYHQLLNIISENY-NLGTIKNNILLAKNEEVCEE 387
           V++L+FA+S E+ G R  TI +P++I   QL   I   +  L  ++N I+ A  +E  E 
Sbjct: 7   VEVLYFAKSAEITGVRSETISVPQEIKALQLWKEIETRHPGLADVRNQIIFAVRQEYVEL 66

Query: 388 NFDIEIKEK-DSIAVIPPLSGG 450
              + + +  D IAVIPP+SGG
Sbjct: 67  GDQLLVLQPGDEIAVIPPISGG 88


>AF091871-1|AAD14598.1|   88|Homo sapiens molybdopterin-synthase
           small subunit protein.
          Length = 88

 Score = 57.2 bits (132), Expect = 2e-08
 Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
 Frame = +1

Query: 211 VKLLFFARSKELAGTRESTIQLPKKISYHQLLNIISENY-NLGTIKNNILLAKNEEVCEE 387
           V++L+FA+S E+ G R  TI +P++I   QL   I   +  L  ++N I+ A  +E  E 
Sbjct: 7   VEVLYFAKSAEITGVRSETISVPQEIKALQLWKEIETRHPGLADVRNQIIFAVRQEYVEL 66

Query: 388 NFDIEIKEK-DSIAVIPPLSGG 450
              + + +  D IAVIPP+SGG
Sbjct: 67  GDQLLVLQPGDEIAVIPPISGG 88


>BC130338-1|AAI30339.1|  485|Homo sapiens tektin 5 protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 250 GTRESTIQLPKKISYHQLLNIISENYNLGTIKNNILLAKNEEVC 381
           G R S I   K    ++L  +++EN NL T+K  +  A NE  C
Sbjct: 142 GQRLSDIGFWKSELSYELDRLLTENQNLETVKRRLECAANEVNC 185


>BC130336-1|AAI30337.1|  485|Homo sapiens tektin 5 protein.
          Length = 485

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 250 GTRESTIQLPKKISYHQLLNIISENYNLGTIKNNILLAKNEEVC 381
           G R S I   K    ++L  +++EN NL T+K  +  A NE  C
Sbjct: 142 GQRLSDIGFWKSELSYELDRLLTENQNLETVKRRLECAANEVNC 185


>AK057433-1|BAB71484.1|  485|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32871 fis, clone TESTI2003914, weakly similar to
           Tektin A1. ).
          Length = 485

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 250 GTRESTIQLPKKISYHQLLNIISENYNLGTIKNNILLAKNEEVC 381
           G R S I   K    ++L  +++EN NL T+K  +  A NE  C
Sbjct: 142 GQRLSDIGFWKSELSYELDRLLTENQNLETVKRRLECAANEVNC 185


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,241,683
Number of Sequences: 237096
Number of extensions: 1093380
Number of successful extensions: 5166
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5166
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)