Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_A09
         (372 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X83218-1|CAA58219.1|  213|Homo sapiens ATP synthase, oligomycin ...    28   8.4  
CR456822-1|CAG33103.1|  213|Homo sapiens ATP5O protein.                28   8.4  
BC022865-1|AAH22865.1|  213|Homo sapiens ATP synthase, H+ transp...    28   8.4  
BC021233-1|AAH21233.1|  213|Homo sapiens ATP synthase, H+ transp...    28   8.4  
AK222608-1|BAD96328.1|  213|Homo sapiens mitochondrial ATP synth...    28   8.4  
AB065790-1|BAC06009.1|  314|Homo sapiens seven transmembrane hel...    28   8.4  

>X83218-1|CAA58219.1|  213|Homo sapiens ATP synthase, oligomycin
           sensitivity conferring protein protein.
          Length = 213

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = -2

Query: 365 INIFSLNQINSKTRNKQLPTKLLNLLKTY*R*TSSARIANATARIVGI 222
           I + SLN I +K R   L T L+NLL    R +++  + +A + ++ +
Sbjct: 87  IKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSV 134


>CR456822-1|CAG33103.1|  213|Homo sapiens ATP5O protein.
          Length = 213

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = -2

Query: 365 INIFSLNQINSKTRNKQLPTKLLNLLKTY*R*TSSARIANATARIVGI 222
           I + SLN I +K R   L T L+NLL    R +++  + +A + ++ +
Sbjct: 87  IKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSV 134


>BC022865-1|AAH22865.1|  213|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, O subunit
           (oligomycin  protein.
          Length = 213

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = -2

Query: 365 INIFSLNQINSKTRNKQLPTKLLNLLKTY*R*TSSARIANATARIVGI 222
           I + SLN I +K R   L T L+NLL    R +++  + +A + ++ +
Sbjct: 87  IKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSV 134


>BC021233-1|AAH21233.1|  213|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F1 complex, O subunit
           (oligomycin  protein.
          Length = 213

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = -2

Query: 365 INIFSLNQINSKTRNKQLPTKLLNLLKTY*R*TSSARIANATARIVGI 222
           I + SLN I +K R   L T L+NLL    R +++  + +A + ++ +
Sbjct: 87  IKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSV 134


>AK222608-1|BAD96328.1|  213|Homo sapiens mitochondrial ATP
           synthase, O subunit precursor variant protein.
          Length = 213

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = -2

Query: 365 INIFSLNQINSKTRNKQLPTKLLNLLKTY*R*TSSARIANATARIVGI 222
           I + SLN I +K R   L T L+NLL    R +++  + +A + ++ +
Sbjct: 87  IKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSV 134


>AB065790-1|BAC06009.1|  314|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -3

Query: 175 VDACLNTTTLP-IIIVFWYL*Q*YINLMACK*KRMTFLLSY 56
           +D  L++TTLP ++ +FW+  Q  IN  AC   +M FL S+
Sbjct: 71  IDLVLSSTTLPKMLAIFWFRDQ-EINFFACL-VQMFFLHSF 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,503,223
Number of Sequences: 237096
Number of extensions: 681449
Number of successful extensions: 1173
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)