Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_A08
         (232 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071393-1|AAL49015.1|  153|Drosophila melanogaster RE45482p pro...    28   1.5  
AF017096-2|AAC39087.1|  153|Drosophila melanogaster protein ( Dr...    28   1.5  
AE014297-670|AAF54164.1|  153|Drosophila melanogaster CG2846-PA ...    28   1.5  
AY060898-1|AAL28446.1|  153|Drosophila melanogaster GM04958p pro...    27   2.7  
X57480-1|CAA40718.1|  392|Drosophila melanogaster odd protein.         26   6.1  

>AY071393-1|AAL49015.1|  153|Drosophila melanogaster RE45482p
           protein.
          Length = 153

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 116 MLTRTPMLMRPRTSRGWGSGS*ALGVPSCTF 208
           ML++ P+       RG+G GS  LG+P+  F
Sbjct: 1   MLSQLPLFAGGEIVRGFGRGSKELGIPTANF 31


>AF017096-2|AAC39087.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterprophosphoribosylamidotransferase
           (Prat) gene, completecds. ).
          Length = 153

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 116 MLTRTPMLMRPRTSRGWGSGS*ALGVPSCTF 208
           ML++ P+       RG+G GS  LG+P+  F
Sbjct: 1   MLSQLPLFAGGEIVRGFGRGSKELGIPTANF 31


>AE014297-670|AAF54164.1|  153|Drosophila melanogaster CG2846-PA
           protein.
          Length = 153

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 116 MLTRTPMLMRPRTSRGWGSGS*ALGVPSCTF 208
           ML++ P+       RG+G GS  LG+P+  F
Sbjct: 1   MLSQLPLFAGGEIVRGFGRGSKELGIPTANF 31


>AY060898-1|AAL28446.1|  153|Drosophila melanogaster GM04958p
           protein.
          Length = 153

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 116 MLTRTPMLMRPRTSRGWGSGS*ALGVPSCTF 208
           ML++ P+       RG+G GS  +G+P+  F
Sbjct: 1   MLSQLPLFAGGEIVRGFGRGSKEMGIPTANF 31


>X57480-1|CAA40718.1|  392|Drosophila melanogaster odd protein.
          Length = 392

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 167 GSGS*ALGVPSCTFGSTNPK 226
           G+G  A GVPSC  GS+ PK
Sbjct: 199 GAGG-ASGVPSCATGSSRPK 217


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,793,261
Number of Sequences: 53049
Number of extensions: 139586
Number of successful extensions: 480
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 24,988,368
effective HSP length: 56
effective length of database: 22,017,624
effective search space used: 440352480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)